BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927009 Length=554 Score E Sequences producing significant alignments: (Bits) Value AT1G76180.1 | Symbols: ERD14 | Dehydrin family protein | chr1:2... 514 4e-145 > AT1G76180.1 | Symbols: ERD14 | Dehydrin family protein | chr1:28586773-28587877 REVERSE LENGTH=1018 Length=1018 Score = 514 bits (278), Expect = 4e-145 Identities = 362/401 (90%), Gaps = 12/401 (3%) Strand=Plus/Plus Query 7 tttttCTGATAACTATGGCGGAGGAAATCAAGAACGTTCCTGAGCAGAAGGTGCCAAAGG 66 |||||| |||||||||||| |||||||||||||| |||||||| ||| |||||||||||| Sbjct 207 TTTTTCCGATAACTATGGCTGAGGAAATCAAGAATGTTCCTGAACAGGAGGTGCCAAAGG 266 Query 67 TAGCGACAGAGGAATCATCATCGGCTGAGGTTACAGATCGTGGATTGTTCGATTTCTTGG 126 |||| ||||||| | ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 267 TAGCAACAGAGG-A--ATCATCGGCAGAGGTTACAGATCGTGGATTGTTCGATTTCTTGG 323 Query 127 GAAAGAAGAAGGGCGAAACAAAACCCGAGGAAACGACGATCGATTCAGAGTTTGAGCAGA 186 |||||||||| | |||||||||||| ||||| || |||||| ||||||||||||||||| Sbjct 324 GAAAGAAGAAAGACGAAACAAAACCAGAGGAGACTCCGATCGCTTCAGAGTTTGAGCAGA 383 Query 187 AGGTTCATATTTCGGAGCCGGAGCCGGCGCCAGAGGTTAAACACGAAAGTCTCCTTGAGA 246 ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| | Sbjct 384 AGGTTCATATTTCAGAGCCGGAGCC------AGAGGTTAAACACGAAAGTCTTCTTGAAA 437 Query 247 AGCTTCACCGAAGCGACAGTTCTTCTAGCTCCTCTAGTgaggaagaaggtgaagatggtg 306 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 438 AGCTTCACCGAAGCGACAGTTCTTCTAGCTCCTCAAGTGAGGAAGAAGGTTCAGATGGTG 497 Query 307 agaagaggaagaagaaaaaggagaagaagaagccagttgctgaagtagaggtgaaaacag 366 |||||||||||||||| |||||||||||||||||| | ||||||| ||||| ||| | Sbjct 498 AGAAGAGGAAGAAGAAGAAGGAGAAGAAGAAGCCAACTACTGAAGTTGAGGT-AAAG--G 554 Query 367 aggaagagaagaaaggGTTTATGGAGAAGTTGAAGGAGAAG 407 |||||||||||||||||||||||||||||||||| |||||| Sbjct 555 AGGAAGAGAAGAAAGGGTTTATGGAGAAGTTGAAAGAGAAG 595 Score = 189 bits (102), Expect = 2e-47 Identities = 124/135 (92%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 420 GTGGAGGAAGCGCATCCGGCGGAAAAGAAAGGGATTCTTGAGAAGATTAAGGAGAAGCTT 479 ||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct 665 GTGGAAGAAGCGCATCCAGTGGAGAAGAAAGGGATTCTTGAGAAGATTAAGGAGAAGCTT 724 Query 480 CCAGGATACCACCCCAAGACCACCGTAGAGGAGGAGAAGAAGGACAAAGAATAAGAAAAA 539 |||||||||||||| |||||||||||||||||||||||||| || |||||||||||| | Sbjct 725 CCAGGATACCACCCTAAGACCACCGTAGAGGAGGAGAAGAAAGATAAAGAATAAGAAGAT 784 Query 540 TATGATTAAAAATAT 554 ||| |||||| |||| Sbjct 785 TATCATTAAAGATAT 799 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26573863763 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5