BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927111 Length=1181 Score E Sequences producing significant alignments: (Bits) Value AT1G77120.1 | Symbols: ADH1, ADH, ATADH, ATADH1 | alcohol dehyd... 1871 0.0 > AT1G77120.1 | Symbols: ADH1, ADH, ATADH, ATADH1 | alcohol dehydrogenase 1 | chr1:28975394-28977417 FORWARD LENGTH=1456 Length=1456 Score = 1871 bits (1013), Expect = 0.0 Identities = 1126/1182 (95%), Gaps = 2/1182 (0%) Strand=Plus/Plus Query 1 CAAGTTCTTCTCTGTTGATAATGTCTACCACCGGACAGATTATTCGATGCAAAGCTGCTG 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 96 CAAGTTCTTCACTGTTGATAATGTCTACCACCGGACAGATTATTCGATGCAAAGCTGCTG 155 Query 61 TGGCATGGGAAGCCGGAAAGCCACTGGTTATGGAGGAAGTGGAGGTTGCTCCGCCGCAGA 120 |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| Sbjct 156 TGGCATGGGAAGCCGGAAAGCCACTGGTGATCGAGGAAGTGGAGGTTGCTCCACCGCAGA 215 Query 121 AACACGAAGTTCGTATCAAGATTCTCTTCACTTCTCTCTGTCACACTGATGTTTACTTCT 180 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 216 AACACGAAGTTCGTATCAAGATTCTCTTCACTTCTCTCTGTCACACCGATGTTTACTTCT 275 Query 181 GGGAAGCTAAGGGACAAACACCGCTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGA 240 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct 276 GGGAAGCTAAGGGACAAACACCGTTGTTTCCACGTATCTTCGGCCATGAAGCTGGAGGGA 335 Query 241 TTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAGCCAGGAGATCATGTGTTGCCCA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 336 TTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAGCCAGGAGATCATGTGTTGCCGA 395 Query 301 TCTTCACCGGAGAATGTGGAGATTGTCCTCATTGTCACTCGGAGGAATCAAACATGTGTG 360 |||| |||||||||||||| || |||| |||||| ||||||||||||||||||||||||| Sbjct 396 TCTTTACCGGAGAATGTGGGGAGTGTCGTCATTGCCACTCGGAGGAATCAAACATGTGTG 455 Query 361 ATCTTCTCAGGATCAACACCGAGCGAGGAGGGATGATTCACGATGGTGAATCGAGATTCT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 456 ATCTTCTCAGGATCAACACCGAGCGAGGAGGGATGATTCACGATGGTGAATCAAGATTCT 515 Query 421 CCATCAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTG 480 |||| ||||||||||| ||| | ||||||||||||||||||||||| ||||||||||| | Sbjct 516 CCATTAATGGCAAACCAATTTACCATTTCCTTGGGACTTCCACGTTCAGTGAGTACACAG 575 Query 481 TGGTTCACTCCGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTCTTGACAAAGTTTGCA 540 |||||||||| |||||||| |||||||||||||||||||||||||||||||| || || | Sbjct 576 TGGTTCACTCTGGTCAGGTTGCTAAGATCAATCCGGATGCTCCTCTTGACAAGGTCTGTA 635 Query 541 TTGTTAGTTGTGGTTTATCCACTGGGTTAGGAGCAACTTTGAATGTGGCTAAACCCAAGA 600 |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 636 TTGTCAGTTGTGGTTTGTCTACTGGGTTAGGAGCAACTTTGAATGTGGCTAAACCCAAGA 695 Query 601 AAGGTCAAAGTGTTGCCATTTTCGGACTTGGTGCTGTTGGTTTA-GCTGCTGCAGAAGGT 659 |||||||||||||||||||||| || |||||||||||||||||| || |||||||||||| Sbjct 696 AAGGTCAAAGTGTTGCCATTTTTGGTCTTGGTGCTGTTGGTTTAGGC-GCTGCAGAAGGT 754 Query 660 GCTAGAATCGCTGGTGCTTCTAGGATCATCGGTGTTGATCTTAACTCTCAAAGATTCGAC 719 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 755 GCTAGAATCGCTGGTGCTTCTAGGATCATCGGTGTTGATTTTAACTCTAAAAGATTCGAC 814 Query 720 CAAGCTAAGGAATTCGGTGTGACCGAGTTTGTGAACCCGAGAGACCATGACAAACCAGTT 779 |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| || Sbjct 815 CAAGCTAAGGAATTCGGTGTGACCGAGTGTGTGAACCCGAAAGACCATGACAAGCCAATT 874 Query 780 CAACAGGTGATCGCTGAGATGACGAATGGAGGAGTGGACAGGAGTGTGGAGTGCACTGGA 839 |||||||||||||||||||||||| |||| || ||||||||||||||||| ||||| ||| Sbjct 875 CAACAGGTGATCGCTGAGATGACGGATGGTGGGGTGGACAGGAGTGTGGAATGCACCGGA 934 Query 840 AGCGTTCAGGCCATGATTCAAGCATTTGAATGTGTTCATGATGGTTGGGGTGTTGCGGTG 899 ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||| Sbjct 935 AGCGTTCAGGCCATGATTCAAGCATTTGAATGTGTCCACGATGGCTGGGGTGTTGCAGTG 994 Query 900 CTGGTCGGTGTGCCAAGCAAAGACGATGCCTTCAAGACTCATCCGATGAATTTCTTGAAT 959 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 995 CTGGTGGGTGTGCCAAGCAAAGACGATGCCTTCAAGACTCATCCGATGAATTTCTTGAAT 1054 Query 960 GAGAGGACTCTTAAGGGTACTTTCTTCGGGAACTACAAACCCAAAACTGACATTCCCGGG 1019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1055 GAGAGGACTCTTAAGGGTACTTTCTTCGGGAACTACAAACCCAAAACTGACATTCCCGGG 1114 Query 1020 GTTGTAGAAAAGTACATGAACAAGGAGCTGGAGCTTGAGAAATTCATCACCCATACAGTG 1079 ||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1115 GTTGTGGAAAAGTACATGAACAAGGAGCTGGAGCTTGAGAAATTCATCACTCACACAGTG 1174 Query 1080 CCATTCTCGGAGATCAACAAGGCCTTTGATTACATGTTGAAGGGAGAGAGTATTCGTTGC 1139 ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1175 CCATTCTCGGAAATCAACAAGGCCTTTGATTACATGCTGAAGGGAGAGAGTATTCGTTGC 1234 Query 1140 ATCATCACCATGGGTGCTTGAAGCCATTCTGTTGCCGATGAT 1181 |||||||||||||||||||||||||||||| | || |||||| Sbjct 1235 ATCATCACCATGGGTGCTTGAAGCCATTCTCTCGCAGATGAT 1276 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57981629475 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5