BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927296
Length=1409
Score E
Sequences producing significant alignments: (Bits) Value
AT1G78820.1 | Symbols: | D-mannose binding lectin protein with... 2126 0.0
AT1G78830.1 | Symbols: | Curculin-like (mannose-binding) lecti... 1736 0.0
> AT1G78820.1 | Symbols: | D-mannose binding lectin protein with
Apple-like carbohydrate-binding domain | chr1:29634124-29635813
REVERSE LENGTH=1690
Length=1690
Score = 2126 bits (1151), Expect = 0.0
Identities = 1318/1400 (94%), Gaps = 6/1400 (0%)
Strand=Plus/Plus
Query 2 AAACGTAAAGAGCACAATCATGCTTCGGTTTGATTTCTTAGTAATCACGGCACTCGCCAT 61
|||| |||||| ||||| ||||||| ||||||||| |||| ||||||||||||| |||||
Sbjct 27 AAACATAAAGAACACAACCATGCTTAGGTTTGATTACTTACTAATCACGGCACTTGCCAT 86
Query 62 TTCCACTGTTTCGGTGGTCATGGCCCAAGTCCCTCCCGAGAAACAATTCAGAGTCCTCAA 121
||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 87 TTCAACTGTTTCGGTTGTCATGGCCCAAGTCCCTCCCGAGAAACAATTCAGAGTGCTCAA 146
Query 122 CGAACCCTCCTACGCCCCATACATAACCGAGTACGACGCGAGTTACCGATTCCTCAACTC 181
||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 147 CGAACCCGGCTACGCCCCATACATCACCGAGTACGACGCGAGTTACCGATTCCTCAACTC 206
Query 182 ACCGAATCAGGACTTCTTCACATTTCCTTTCCAGCTCATGTTCTACAATACTACTCCTAG 241
|||||||||| | ||||||||| ||||||||||||||||||| |||||||| ||||||||
Sbjct 207 ACCGAATCAGAATTTCTTCACAATTCCTTTCCAGCTCATGTTTTACAATACAACTCCTAG 266
Query 242 CGCCTACGTTTTAGCTCTCCGAGTCGGATCCAGGCGTGACATGAGTTTCACGCGTTGGAT 301
||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 267 CGCCTACGTGTTAGCTCTCCGAGTCGGAACGAGGCGTGACATGAGTTTCACGCGTTGGAT 326
Query 302 CTGGGACGCCAATCGCAACAACCCCGTCGGTGACAACTCCACACTCTCACTCGGCCGCAA 361
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||
Sbjct 327 CTGGGACGCCAATCGCAACAACCCCGTCGGAGACAACTCCACACTCTCATTCGGCCGAAA 386
Query 362 CGGCAACCTTGTGCTCGCTGAGTTAAACGGCCACGTCAAGTGGCAGACTAACACAGCCAA 421
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 387 CGGAAACCTTGTGCTCGCTGAGTTAAACGGCCAAGTCAAGTGGCAGACTAACACAGCCAA 446
Query 422 CAAAGGTGTCACCGGATTCGAGATCTTGCCCAACGGCAACATGGTGCTACACGACAAACA 481
|||||| |||||||||||| | ||||||||||| || |||||||||||||||||||||||
Sbjct 447 CAAAGGCGTCACCGGATTCCAAATCTTGCCCAATGGAAACATGGTGCTACACGACAAACA 506
Query 482 TGGAAAATTCGTTTGGCAGAGTTTTGATCA-CCCAACCGATACACTCCTCGTCGGCCAAT 540
|||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||
Sbjct 507 TGGAAAATTCGTTTGGCAGAGTTTCGATCATCCC-ACCGATACACTCCTCGTCGGCCAAT 565
Query 541 CCCTAAAAGTTAACGGTGTTAACAAACTCGTTAGCCGGACATCTGCTATGAACGGCTCCG 600
|||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 566 CCCTAAAAGTTAACGGAGTTAACAAACTCGTTAGCCGTACATCTGATATGAACGGCTCCG 625
Query 601 ATGGTCCGTACAGCATGGTGCTGGAAAACAAAGGTTTAACCATGTACGTTAACAGAACCG 660
|||||||||||||||||||| |||| |||||||| ||||||||||||||||||| |||||
Sbjct 626 ATGGTCCGTACAGCATGGTGTTGGACAACAAAGGCTTAACCATGTACGTTAACAAAACCG 685
Query 661 GTAAGCCGTTAGTTTACGGCGGATGGCCGGATCACGATTTCCGCGGCACCGTCACGTTCG 720
||| ||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||
Sbjct 686 GTACGCCGTTAGTTTACGGGGGATGGACGGATCACGACTTCCGCGGTACCGTCACGTTCG 745
Query 721 CTGTTACAAGAGAGTTCGACAATTTAACGGAGCCGTCAGCTTACGAGCTTCTCCTAGAAC 780
| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 746 CCGTTACAAGAGAGTTCGATAATTTAACGGAGCCGTCAGCTTACGAGCTTCTCTTAGAAC 805
Query 781 CCGCACCACAACCCGCTACGAATCCGGGTAATAACCGCCGGTTACTCCAAGTCCGACCAA 840
|||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 806 CCGCACCACAACCCGCTACGAACCCGGGTAATAACCGCCGGTTACTCCAAGTTAGACCAA 865
Query 841 TCGGAAGCGGAGGAGGAACTTTAAATC-TGAACAAAATCAATTACAACGGAACGATTTCG 899
||||||||||||||||||||||||| | | ||||||||||| ||||| |||||||| |||
Sbjct 866 TCGGAAGCGGAGGAGGAACTTTAAA-CTTAAACAAAATCAACTACAATGGAACGATATCG 924
Query 900 TATCTCAGACTCGGATCTGACGGGAGTCTCAAGG-CTTACTCGTATTTCCCAGCCGCGAC 958
||||| ||||| ||||| ||||| || ||||||| ||| |||||||||||| ||||||||
Sbjct 925 TATCTGAGACTTGGATCCGACGGTAGCCTCAAGGCCTT-CTCGTATTTCCCTGCCGCGAC 983
Query 959 GTATCTCGAATGGGAAGAGAGTTTCTCATTCTTCTCCACTTACTTCGTCCGTCAATGCGG 1018
|||||||||||||||||||| |||| | |||||||||| |||||||||||||||||||||
Sbjct 984 GTATCTCGAATGGGAAGAGACTTTCGCTTTCTTCTCCAATTACTTCGTCCGTCAATGCGG 1043
Query 1019 TTTGCCGACGTTTTGCGGCGATTACGGTTACTGCAATCGAGGAATGTGCGTCGGATGCCC 1078
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 1044 TTTGCCGACGTTTTGCGGCGATTACGGTTACTGCGATCGAGGAATGTGCGTCGGGTGCCC 1103
Query 1079 TACACCGAAAGGTCTGTTAGCTTGGAGTGATAAATGCGCACCACCTAAAACGACGCAGTT 1138
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1104 TACACCGAAAGGTCTGTTAGCTTGGAGTGATAAATGCGCTCCACCTAAAACGACGCAGTT 1163
Query 1139 TTGTAGCGGAGGCAAGGGTAAAACTGTCAATTATTACAAGATAGTCGGTGTTGAGCATTT 1198
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1164 TTGCAGCGGAGGCAAGGGTAAAGCTGTCAATTATTACAAGATAGTCGGTGTTGAGCATTT 1223
Query 1199 TACTGGGCCTTATGTTAATGGTGGACAAGGCCCAACTTCTGTGAACGATTGCAAGGCTAA 1258
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1224 TACTGGGCCGTATGTTAATGATGGACAAGGCCCAACTTCTGTGAACGATTGCAAGGCTAA 1283
Query 1259 ATGCGATCGTGATTGCAAGTGTTTGGGTTACTTCTACAAGGAGAAGGACAAGAAATGTTT 1318
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284 GTGCGATCGTGATTGCAAGTGTTTGGGTTACTTCTACAAGGAGAAGGACAAGAAATGTTT 1343
Query 1319 GCTTGCTCCTCTTCTTGGTACACTTATTAAAGACGCCAACACTTCTTCCATTGCTTACAT 1378
||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||
Sbjct 1344 GCTTGCTCCTCTTCTTGGTACACTTATCAAAGATGCCAACACTTCTTCCGTTGCTTACAT 1403
Query 1379 CAAATATTAGCGAGTTTTAT 1398
|||||||||||||| |||||
Sbjct 1404 CAAATATTAGCGAGATTTAT 1423
> AT1G78830.1 | Symbols: | Curculin-like (mannose-binding) lectin
family protein | chr1:29636955-29638552 REVERSE LENGTH=1598
Length=1598
Score = 1736 bits (940), Expect = 0.0
Identities = 1240/1384 (90%), Gaps = 24/1384 (2%)
Strand=Plus/Plus
Query 17 AATCATGCT-TCGGTTTGATTTCTTAGTAATCACGGCACTCGCCATTTCCACTGTTTCGG 75
||||||| | ||| |||| | ||||||||| | |||||| |||||| ||||||||||||
Sbjct 41 AATCATG-TCTCGATTTGCTATCTTAGTAACCTTGGCACTTGCCATTGCCACTGTTTCGG 99
Query 76 TGGTCATGGCCCAAGTCCCTCCCGAGAAACAATTCAGAGTCCTCAACGAACCCTCCTACG 135
|||| || || ||||||||||| |||||||||||||||||| |||||||| | ||
Sbjct 100 TGGTTATAGCTCAAGTCCCTCCGGAGAAACAATTCAGAGTCGTCAACGAAGGAGAATTCG 159
Query 136 CCCCATACATAACCGAGTACGACGCGAGTTACCGATTCCTC-AACTCACCGAATCAGGA- 193
|||||| || ||||||||||| |||||| ||||| || || ||| | || || ||
Sbjct 160 GTGAATACATCACTGAGTACGACGCAAGTTACAGATTCATCGAA-TCATCAAACCA-GAG 217
Query 194 CTTCTTCACATTTCCTTTCCAGCTCATGTTCTACAATACTACTCCTAGCGCCTACGTTTT 253
||||||||||| || ||||||||| |||| ||||| ||||| |||||||||||| | ||
Sbjct 218 CTTCTTCACATCACCATTCCAGCTCTTGTTTTACAACACTACCCCTAGCGCCTACATCTT 277
Query 254 AGCTCTCCGAGTCGGATC-CAGGCGTGACATGAGT-T-TCACGCGTTGGATCTGGGACGC 310
|||||||||||||||| | |||||||||| |||| | || ||||||||| ||||||||
Sbjct 278 AGCTCTCCGAGTCGGA-CTCAGGCGTGAC--GAGTCTACCATGCGTTGGATATGGGACGC 334
Query 311 CAATCGCAACAACCCCGTCGGTGACAACTCCACACTCTCACTCGGCCGCAACGGCAACCT 370
|||||||||||||||||||| || ||| | ||||||||||||||||| |||||||||||
Sbjct 335 GAATCGCAACAACCCCGTCGGAGAAAACGCTACACTCTCACTCGGCCGTAACGGCAACCT 394
Query 371 TGTGCTCGCTG-AGTTAAACGG-CCACGTCAAGTGGCAGACTAACACAGCCAACAAAGGT 428
|| ||||||| || | |||| | | ||||| ||||||||||||||||| ||||||||
Sbjct 395 CGTCCTCGCTGAAGCT-GACGGACGA-GTCAAATGGCAGACTAACACAGCTAACAAAGGC 452
Query 429 GTCACCGGATTCGAGATCTTGCCCAACGGCAACATGGTGCTACACGACAAACATGGAAAA 488
|||||||||||| | ||||| |||||||| ||||| || |||||||||||| | || |||
Sbjct 453 GTCACCGGATTCCAAATCTTACCCAACGGAAACATCGTCCTACACGACAAAAACGGCAAA 512
Query 489 TTCGTTTGGCAGAGTTTTGATCACCCAACCGATACACTCCTCGTCGGCCAATCCCTAAAA 548
||||| ||||||||||| |||||||| ||||||||||||||| ||||||||| |||||
Sbjct 513 TTCGTATGGCAGAGTTTCGATCACCCCACCGATACACTCCTCACCGGCCAATCGTTAAAA 572
Query 549 GTTAACGGTGTTAACAAACTCGTTAGCCGGACATCTGCTAT-GAACGGCTCCGATGGTCC 607
|||||||| || ||||||||||||||||| ||||||| | | ||||||||| ||||||||
Sbjct 573 GTTAACGGAGTCAACAAACTCGTTAGCCGTACATCTGAT-TCGAACGGCTCAGATGGTCC 631
Query 608 GTACAGCATGGTGCTGGA-AAACAAAGGTTTAACCATGTACGTTAACAGAACCGGTAAGC 666
|||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||
Sbjct 632 GTACAGCATGGTGCTGGACAAA-AAAGGTTTAACCATGTACGTTAACAAAACCGGTACGC 690
Query 667 CGTTAGTTTACGGCGGATGGCCGGATCACGATTTCCGCGGCACCGTCACGTTCGCTGTTA 726
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 691 CGTTAGTTTACGGCGGATGGCCGGATCACGATTTCCGCGGCACCGTCACTTTCGCCGTTA 750
Query 727 CAAGAGAGTTCGACAATTTAACGGAGCCGTCAGCTTACGAGCTTCTCCTAGAACCCGCAC 786
||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 751 CAAGAGAATTCGATAATTTAACGGAGCCGTCAGCTTACGAGCTTCTCTTAGAACCCGCAC 810
Query 787 CACAACCCGCTACGAATCCGGGTAATAACCGCCGGTTACTCCAAGTCCGACCAATCGGAA 846
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 811 CACAACCCGCTACGAACCCGGGTAATAACCGCCGGTTACTCCAAGTCAGACCAATCGGAA 870
Query 847 GCGGAGGAGGAACTTTAAATCTGAACAAAATCAATTACAACGGAACGATTTCGTATCTCA 906
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 871 GCGGAGGAGGAACTTTAAATCTGAACAAAATCAATTACAACGGAACGATTTCGTATCTAA 930
Query 907 GACTCGGATCTGACGGGAGTCTCAAGGCTTACTCGTATTTCCCAGCCGCGACGTATCTCG 966
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 931 GACTCGGATCTGACGGGAGTCTCAAGGCTTACTCGTATTTCCCAGCAGCTACGTATCTCA 990
Query 967 AATGGGAAGAGAGTTTCTCATTCTTCTCCACTTACTTCGTCCGTCAATGCGGTTTGCCGA 1026
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 991 AATGGGAAGAGAGTTTCTCATTCTTCTCCACTTACTTCGTCCGTCAATGTGGCTTGCCGT 1050
Query 1027 CGTTTTGCGGCGATTACGGTTACTGCAATCGAGGAATGTGCGTCG-GATGCCCTACACCG 1085
|||||||||||||||||||||||||| |||| || |||||| || | || ||||||||
Sbjct 1051 CGTTTTGCGGCGATTACGGTTACTGCGATCGTGGGATGTGCAACGCG-TGTCCTACACCA 1109
Query 1086 AAAGG-TCTGTTAGCTTGGAGTGATAAATGCGCACCACCTAAAACGACGCAGTTTTGTAG 1144
||||| | | | | ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1110 AAAGGAT-TACTCGGATGGAGTGATAAATGCGCACCACCTAAAACGACGCAGTTTTGCAG 1168
Query 1145 CGGAGGCAAGGGTAAAACTGTCAATTATTACAAGATAGTCGGTGTTGAGCATTTTACTGG 1204
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1169 CGGAGTCAAGGGTAAAACTGTCAATTATTATAAGATAGTCGGTGTTGAGCATTTTACTGG 1228
Query 1205 GCCTTATGTTAATGGTGGACAAGGCCCAACTTCTGTGAACGATTGCAAGGCTAAATGCGA 1264
|||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1229 GCCTTATGTTAATGATGGACAAGGCCCAACTTCTGTGAACGATTGCAAGGCCAAGTGCGA 1288
Query 1265 TCGTGATTGCAAGTGTTTGGGTTACTTCTACAAGGAGAAGGACAAGAAATGTTTGCTTGC 1324
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1289 TCGTGATTGCAAGTGTTTGGGTTACTTCTACAAAGAGAAAGACAAGAAATGTTTGCTTGC 1348
Query 1325 TCCTCTTCTTGGTACACTTATTAAAGACGCCAACACTTCTTCCATTGCTTACATCAAATA 1384
|||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||
Sbjct 1349 TCCTCTGCTTGGTACACTTATCAAAGATGCCAACACTTCTTCTGTTGCTTACATCAAATA 1408
Query 1385 TTAG 1388
||||
Sbjct 1409 TTAG 1412
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69427353735
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5