BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927522 Length=932 Score E Sequences producing significant alignments: (Bits) Value AT1G79900.1 | Symbols: ATMBAC2, BAC2 | Mitochondrial substrate ... 1493 0.0 > AT1G79900.1 | Symbols: ATMBAC2, BAC2 | Mitochondrial substrate carrier family protein | chr1:30052297-30053936 REVERSE LENGTH=1455 Length=1455 Score = 1493 bits (808), Expect = 0.0 Identities = 892/933 (96%), Gaps = 4/933 (0%) Strand=Plus/Plus Query 1 GTACAATCCCATCCTTGGGATATGGATTTCTGGCCGGAGTTTATGGCGACCAGCTGGGGA 60 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 319 GTACAATCCCATCCTT-GG-TATGGATTTCTGGCCGGAGTTTATGGCGACCAGCTGGGGA 376 Query 61 CGAGAGTTCGTCGCCGGTGGTTTCGGAGGTGTTGCCGGAATCATCTCCGGCTACCCCTTG 120 ||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||| Sbjct 377 AGAGAGTTCGTCGCCGGTGGTTTCGGTGGCGTCGCCGGCATCATCTCCGGCTACCCCTTG 436 Query 121 GACACCCTCAGAATTCGCCAGCAACAGAGCTCTAAATCGGGATCTGCCTTCTCCATTCTC 180 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 437 GACACCCTCAGAATTCGCCAGCAACAGAGCTCGAAATCTGGATCTGCCTTCTCCATTCTC 496 Query 181 CGGCGGATGCTCGCCGTTGAGGGTCCCACCTCTCTCTACAGAGGCATGGCTGCGCCTTTG 240 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 497 CGGCGGATGCTCGCCATTGAGGGTCCCTCCTCTCTCTACAGAGGCATGGCTGCGCCTTTG 556 Query 241 GCCTCCGTCACTTTTCAGAATGCTATGGTATTCCAGATTTACGCCATATTCTCTCGCTCC 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 557 GCCTCCGTCACTTTTCAGAATGCTATGGTATTCCAGATATACGCCATATTCTCTCGCTCT 616 Query 301 TTTGATTCCTCTGTTCCTCTGGAAGAGCCTCCTTCCTACAGAGGCGTTGCTCTTGGAGGT 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 617 TTTGATTCCTCTGTTCCTCTGGTAGAGCCTCCTTCCTACAGAGGCGTTGCTCTTGGTGGT 676 Query 361 GTTGCCACCGGTGCTGTCCAGAGCCTCTTGCTCACCCCTGTCGAGCTCATCAAGATTCGT 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 677 GTTGCCACCGGTGCTGTACAGAGCCTCTTGCTCACCCCTGTCGAGCTCATCAAGATTCGT 736 Query 421 CTCCAGCTTCAGCAGACCAAGTCTGGTCCCCTCACCTTGGCCAAGAGTATCCTTAGGAGT 480 ||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| Sbjct 737 CTCCAGCTTCAGCAGACTAAGTCTGGTCCCATCACCTTGGCCAAGAGCATCCTTAGGAGA 796 Query 481 CAGGGCC-TCAAGGGGCTTTACAAAGGCCTCACCATCACTGTGCTCCGAGATGCTCCCGC 539 ||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 797 CAGGGCCTTC-AGGGGCTTTACAGAGGCCTCACCATCACCGTGCTCCGAGATGCTCCCGC 855 Query 540 TCATGGCCTCTACTTCTGGACCTATGAGTACGTCAGAGAAAGGCTTCACCCCGGCTGCCG 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 856 TCATGGCCTCTACTTCTGGACCTATGAGTACGTCAGAGAAAGGCTTCACCCCGGCTGCAG 915 Query 600 AAAGACCGGACAAGAAAACCTCAGGACCATGCTGGTCGCTGGTGGCCTTGCTGGAGTGGC 659 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 916 AAAGACCGGACAAGAAAACCTCAGGACCATGCTCGTGGCTGGTGGCCTTGCTGGAGTGGC 975 Query 660 CAGCTGGGTCGCTTGTTATCCTCTTGATGTCGTCAAGACCAGACTGCAGCAAGGTCATGG 719 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 976 CAGCTGGGTCGCTTGTTATCCTCTTGATGTCGTCAAGACCAGACTCCAACAAGGTCATGG 1035 Query 720 GGCTTACGAGGGCATTGCCGATTGTTTTCGCAAGAGCGTCAAACAGGAAGGCTATACCGT 779 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1036 GGCTTACGAGGGCATTGCCGATTGTTTTCGCAAGAGCGTCAAACAGGAAGGCTATACGGT 1095 Query 780 TCTCTGGCGTGGCCTTGGCACTGCAGTTGCCAGGGCCTTTGTGGTCAACGGTGCTATCTT 839 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1096 TCTCTGGCGTGGCCTCGGGACTGCAGTTGCCAGGGCCTTTGTGGTCAACGGTGCTATCTT 1155 Query 840 TGCTGCTTATGAGGTCGCCTTGCGGTGTTTTTTCACTCAATTGCCATCCCCTGATGTTGT 899 ||||||||||||||| |||||||||||| | |||| ||||| ||||||||| ||| |||| Sbjct 1156 TGCTGCTTATGAGGTAGCCTTGCGGTGTCTATTCAATCAATCGCCATCCCCAGATATTGT 1215 Query 900 CAAAGGAGAGTGAGTGAGTAAAGGGCAAAGAAG 932 || |||||| ||||||||||||||||||||||| Sbjct 1216 CACAGGAGATTGAGTGAGTAAAGGGCAAAGAAG 1248 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45562371329 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5