BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927565 Length=1227 Score E Sequences producing significant alignments: (Bits) Value AT3G01910.1 | Symbols: SOX, AT-SO, AtSO | sulfite oxidase | chr... 1995 0.0 > AT3G01910.1 | Symbols: SOX, AT-SO, AtSO | sulfite oxidase | chr3:314694-317431 REVERSE LENGTH=1564 Length=1564 Score = 1995 bits (1080), Expect = 0.0 Identities = 1164/1206 (97%), Gaps = 0/1206 (0%) Strand=Plus/Plus Query 22 AAGAATGCCTGGAATTCGAGGTCCTTCCGAGTACTCGCAGGAACCACCTCGTCACCCTTC 81 |||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||| Sbjct 154 AAGAATGCCTGGAATTAGAGGTCCTTCGGAATACTCGCAGGAACCACCTCGTCACCCTTC 213 Query 82 TCTCAAGGTCAACGCCAAGGAACCTTTCAACGCTGAGCCTCCCCGCTCGGCCTTAGTCTC 141 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 214 TCTCAAGGTCAACGCCAAGGAACCTTTCAACGCCGAGCCTCCCCGCTCGGCCTTAGTCTC 273 Query 142 ATCTTATGTCACTCCCGTCGACCTTTTCTACAAGCGAAATCATGGTCCCATACCCATTGT 201 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 274 ATCTTATGTCACTCCCGTCGACCTTTTCTACAAGCGAAATCATGGTCCCATCCCCATTGT 333 Query 202 TGATCATCTTCAAAGCTACTCCGTCACCCTTACTGGATTGATCCAGAACCCGACAAAGCT 261 |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 334 TGATCACCTTCAAAGCTACTCCGTCACCCTTACTGGATTGATCCAGAACCCGAGAAAGCT 393 Query 262 CTTTATCAAAGACATCAGGTCCCTCCCTAAGTACAATGTTACTGCTACTCTACAGTGTGC 321 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 394 CTTTATCAAAGACATCAGGTCCCTCCCAAAGTACAATGTTACTGCTACTCTTCAGTGTGC 453 Query 322 CGGTAACAGAAGAACTGCCATGAGCAAAGTTAGGAATGTTAGAGGTGTTGGATGGGATGT 381 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 454 CGGTAACAGAAGGACTGCCATGAGCAAAGTTAGGAATGTTAGAGGTGTTGGATGGGATGT 513 Query 382 TTCTGCTATTGGCAACGCTGTCTGGGGTGGGGCCAAATTGGCCGATGTTCTTGAGCTTGT 441 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct 514 TTCTGCTATTGGCAACGCTGTCTGGGGTGGGGCGAAACTGGCCGATGTTCTTGAGCTTGT 573 Query 442 GGGGATACCAAAGCTGTCTGCTTCTACCAATTTAGGTGGCAGACATGTTGAGTTCGTCAG 501 |||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| || Sbjct 574 GGGGATACCAAAGCTGACTGCTTCTACCAATTTAGGAGCCAGACATGTTGAGTTCGTTAG 633 Query 502 TGTTGATCGCTGTAAGGAGGAAAATGGGGGCCCTTATAAGGCCTCAATCCCTCTAAGTCA 561 |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 634 TGTTGATCGCTGTAAGGAGGAAAATGGGGGCCCTTATAAGGCGTCAATCACTCTAAGTCA 693 Query 562 AGCCACTAATCCTGAAGCGGATGTTCTACTCGCTTATGAGATGAATGGAGAGACCCTGAA 621 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 694 AGCCACAAATCCTGAAGCGGATGTTCTACTCGCTTATGAGATGAATGGAGAGACCCTGAA 753 Query 622 CAGGGATCACGGATTTCCGTTAAGGGTGGTTGTCCCAGGTGTGATTGGTGCTCGTTCCGT 681 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 754 CAGGGATCACGGATTTCCGTTAAGGGTGGTTGTCCCTGGTGTGATTGGTGCTCGTTCGGT 813 Query 682 CAAATGGCTTGATTCCATCAATGTCATCGCTGAAGAAAGCCAGGGATTCTTCATGCAAAA 741 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 814 CAAATGGCTTGATTCCATCAATGTCATCGCTGAAGAAAGCCAGGGATTCTTCATGCAAAA 873 Query 742 AGATTACAAAATGTTCCCACCCTCTGTCAATTGGGATAACATCAACTGGTCCTCAAGGAG 801 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 874 AGATTACAAAATGTTTCCACCCTCTGTCAATTGGGATAATATCAACTGGTCCTCTAGGAG 933 Query 802 ACCGCAAATGGATTTCCCTGTTCAGAGTGCAATCTGCTCTGTGGAGGACGTGCAAATGGT 861 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 934 ACCGCAAATGGATTTCCCTGTTCAGAGTGCAATCTGCTCTGTGGAGGATGTGCAAATGGT 993 Query 862 GAAGCCTGGAAAGGTAAGCATCAAAGGATACGCTGTTTCAGGAGGTGGACGTGGGATAGA 921 |||||||||||||||||| ||||||||||| || ||||||||||||||||| |||||||| Sbjct 994 GAAGCCTGGAAAGGTAAGTATCAAAGGATATGCGGTTTCAGGAGGTGGACGCGGGATAGA 1053 Query 922 GCGAGTGGACATATCCCTGGATGGAGGCAAAAACTGGGTGGAAGCTTCTAGAACGCAGAA 981 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1054 AAGAGTGGACATATCCCTGGATGGAGGCAAAAACTGGGTGGAAGCTTCTAGAACGCAGGA 1113 Query 982 ACCAGGAAAGCATTACATCTCAGAACACAACTCCAGCGAAAAATGGGCATGGGTGTTGTT 1041 |||||||||||| |||||||||||||||| |||||| || |||||||||||||||||||| Sbjct 1114 ACCAGGAAAGCAGTACATCTCAGAACACAGCTCCAGTGACAAATGGGCATGGGTGTTGTT 1173 Query 1042 TGAAACCACCATTGATGTTTCACAGACTACGGAGGTCATCGCCAAAGCGGTCGATTCGGC 1101 |||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1174 TGAAGCCACCATTGATGTTTCACAGACTACAGAGGTCATCGCCAAAGCGGTTGATTCGGC 1233 Query 1102 GGCGAATGTTCAACCGGAAAATGTGGAGTCGGTGTGGAACCTAAGAGGGGTTCTAAACAC 1161 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1234 GGCGAATGTTCAACCGGAAAATGTGGAGTCGGTGTGGAACCTAAGAGGGGTTCTCAACAC 1293 Query 1162 TTCGTGGCACCGTGTACTTCTCCGGCTTGGCCACTCTAACTTGTAGACCAAGTTACCACT 1221 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1294 TTCGTGGCACCGTGTCCTTCTCCGGCTTGGCCACTCTAACTTGTAGACCAAGTTACCACT 1353 Query 1222 ACGCGT 1227 | |||| Sbjct 1354 ATGCGT 1359 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60290854545 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5