BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927805 Length=373 Score E Sequences producing significant alignments: (Bits) Value AT3G03070.1 | Symbols: | NADH-ubiquinone oxidoreductase-relate... 584 2e-166 > AT3G03070.1 | Symbols: | NADH-ubiquinone oxidoreductase-related | chr3:696299-698156 REVERSE LENGTH=714 Length=714 Score = 584 bits (316), Expect = 2e-166 Identities = 350/367 (95%), Gaps = 0/367 (0%) Strand=Plus/Plus Query 3 TTTCTCGGTGTTGGAGCAATGGCGTCAAATCTCCTGAAAGCCCTAATCCGATCGCAGATT 62 ||||||| ||||||| |||||||||| |||||||||||||||||||||||||| |||||| Sbjct 70 TTTCTCGTTGTTGGAACAATGGCGTCGAATCTCCTGAAAGCCCTAATCCGATCTCAGATT 129 Query 63 CTTCCATCTTCGAGGAGGAATTTTAGTGTGGCGACCACACAACTCGGCATTCCAACAGAC 122 ||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct 130 CTTCCATCTTCCAGGAGGAATTTCAGTGTGGCGACCACACAGCTTGGCATTCCAACAGAC 189 Query 123 GATCTAGTCGGCAATCACACCGCCAAATGGATGCAGGATAGAAGCAAGAAATCACCTATG 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 190 GATCTAGTCGGCAATCACACCGCCAAATGGATGCAGGATAGAAGCAAGAAATCACCTATG 249 Query 183 GAACTGATCAGTGAGGTTCCACCTATCAAAGTTGATGGAAGGATTGCTGCTTGTGAAGGA 242 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 250 GAACTGATTAGTGAGGTTCCACCTATCAAAGTTGATGGAAGGATTGTTGCTTGTGAAGGA 309 Query 243 GACACCAATCCGGCCCTGGGTCATCCAATCGAGTTCATATGCCTCGACCTAGATGAGCCT 302 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 310 GACACCAATCCGGCCCTAGGTCATCCAATCGAGTTCATATGCCTCGACCTAAATGAGCCT 369 Query 303 GCGATCTGCAAGTACTGCGGCCTTCGCTATGTTCAAGATCATCACCACTAAGCCAAATTC 362 |||||||||||||||||||||||||| |||||||||||||||||||| | || ||||||| Sbjct 370 GCGATCTGCAAGTACTGCGGCCTTCGTTATGTTCAAGATCATCACCATTGAGGCAAATTC 429 Query 363 CGAAAGT 369 |||||| Sbjct 430 TGAAAGT 436 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17543444401 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5