BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927919 Length=831 Score E Sequences producing significant alignments: (Bits) Value AT3G03870.2 | Symbols: | unknown protein; BEST Arabidopsis tha... 1314 0.0 > AT3G03870.2 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18130.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:995217-997410 FORWARD LENGTH=1334 Length=1334 Score = 1314 bits (711), Expect = 0.0 Identities = 801/843 (95%), Gaps = 12/843 (1%) Strand=Plus/Plus Query 1 CAAGATCGATTAAGGAGAAGATGGATCTCGAGGATTGGGAATTAGTACTCCCCAATAACA 60 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 284 CAAGATCGATCAAGGAGAAGATGGATCTCGAGGATTGGGAATTAGTACTCCCCAAGAACA 343 Query 61 GCTTCAAGGATCTTGATCTTGATCATGACGAGGATCATCATGGAGCGATGGTAATGGACT 120 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 344 GCTTCAAGGATCTTGATCTTGATCATGACGAGGATCATCATGGAGCCATGGTGATGGACT 403 Query 121 ACTTCCTCTGCCCATCTACTAAAGATCCTCTCCCAAAAACAGAGTCTCCTCCAAGAACCA 180 |||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| Sbjct 404 ACTTCCTCTGCCCATCTACTAAAGATCCTCTCCCCAAGACAGAGTCTCCTCCAAGATCCA 463 Query 181 TAGTGGTCCCTAAAAATCTTCTTCAAGTTCCCATAGCTTGGGAAGCCGTTTTGGACCAAG 240 ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct 464 AAGTGGTCCCTAAAAAGATTCTTCAAGTTCCCATAGCTTGGGAAGCCGTGTTGGATCAAG 523 Query 241 ACAACACGAAGAAACCCAATAA-CC-G----TGAACCGGAT-C-CA----GATCCGGATT 288 |||||||||||| ||||||||| || | |||||||||| | || |||||||||| Sbjct 524 ACAACACGAAGATACCCAATAACCCTGATCTTGAACCGGATCCGCATCCGGATCCGGATT 583 Query 289 CAAAACAAACCCTTTCGACGGACTTTGTTTCGTCACCTAGAGTTTCCTTCAAGATAATGA 348 |||||| |||||||||||||||| |||||||||||| ||||||||||||||||| |||| Sbjct 584 CAAAACCGACCCTTTCGACGGACTCTGTTTCGTCACCAAGAGTTTCCTTCAAGATCATGA 643 Query 349 AGGAGACTGAATTTGCCGACATGAAAATTGACCCACCAGCGAGGATCACGAGTCCTCTGC 408 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 644 AGGACACTGAATTTGCCGACATGAAAATTGACCCACCAGCGAGGATCACGAGTCCTCTGC 703 Query 409 CTCAGATCGATGCTGCTGCATCGAAACCCTCTGATTTAGAAGGAGGAGATGACGTGCGAG 468 |||||||||||| |||||| |||||||||||||||||||||||||| |||||| |||||| Sbjct 704 CTCAGATCGATGATGCTGCTTCGAAACCCTCTGATTTAGAAGGAGGGGATGACTTGCGAG 763 Query 469 ACAAGGAAGAAGTTGTTTTGGAGGAAGAAGATGAAGATGGTAGTGGTGGTGAGAGATTGA 528 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 764 ACAAGAAAGAAGTTGTTTTGGAGGAAGAAGATGAAGATGGTAGTGGTGGTGAGAGATTGA 823 Query 529 ATCTGTGGAAGGCTGGTCTCAATGGGATTGGAGCAATCTGTTCTTTTGGGGTCGCAGCTG 588 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 824 ATCTGTGGAAGGCTGGTCTCAATGGGATTGGAGCAATCTGTTCTTTTGGGGTTGCAGCTG 883 Query 589 CTGCTGCTACTGTATGTGTCTTCTTCCTCGGACACAACAATATCAAAATCTGTAAGAACA 648 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 884 CTGCTGCTACCGTATGTGTCTTCTTCCTCGGACACAACAATATCAAAATCTGTAAGAACA 943 Query 649 AGAACCAGATGCTTAGGTTCCAGATTTACTCCGATGATAATAAGAGGATGAAAGAAGTTG 708 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 944 AGAACCAGATGCTTCGGTTCCAGATTTACTCCGATGATAATAAGAGGATGAAAGAAGTTG 1003 Query 709 TGAATCATGCAACAAAGCTCAATGAAGCAAACTTTGGTATGAAAAGTGTTCCTGTCGTAA 768 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1004 TGAATCATGCAACAAAGCTCAATGAAGCAATCTTTGGTATGAAAGGTGTTCCTGTCGTAA 1063 Query 769 GAGCTCAAATATCTTTTGGGGGTCACTACGATGGACTTTGAATCTCAGCCGTCATAATAG 828 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1064 GAGCTCAAATATCTTTTGGGGGTCACTACGATGGACTTTGAATCTCAGCCATCATAATAG 1123 Query 829 TTC 831 ||| Sbjct 1124 TTC 1126 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40488722482 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5