BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927952 Length=219 Score E Sequences producing significant alignments: (Bits) Value AT3G04140.1 | Symbols: | Ankyrin repeat family protein | chr3:... 246 5e-65 > AT3G04140.1 | Symbols: | Ankyrin repeat family protein | chr3:1086877-1089229 FORWARD LENGTH=2280 Length=2280 Score = 246 bits (133), Expect = 5e-65 Identities = 149/157 (95%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 39 AGTCCAGACAGAGAGAGTTTTGATGGAATCAGTGAGTGTTCGACTGAAATCTCGACGCAT 98 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct 1564 AGTCCAGACAGAGAGAGTTTTGATGGAATTAGTGAGTGTTCAACTGAAATTTCGACGCAT 1623 Query 99 TCGAAACGCAAACGCCGCGGTGGTGGCGGTACAGGAGCGCGTCTTAAGCTTCTTTTACGG 158 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1624 TCGAAACGCAAACGCCGCGGTGGCGGCGGTACAGGAGCGCGTCTTAAGCTTCTTTTACGG 1683 Query 159 TGGGCGAAGAGGGAAGAATCGGAGGAGAATCGCCGTT 195 |||||||||||||||||||| || || ||||| |||| Sbjct 1684 TGGGCGAAGAGGGAAGAATCAGAAGAAAATCGTCGTT 1720 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9802211055 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5