BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg928658 Length=1160 Score E Sequences producing significant alignments: (Bits) Value AT3G09810.1 | Symbols: IDH-VI | isocitrate dehydrogenase VI | c... 1975 0.0 AT5G03290.1 | Symbols: IDH-V | isocitrate dehydrogenase V | chr... 1227 0.0 > AT3G09810.1 | Symbols: IDH-VI | isocitrate dehydrogenase VI | chr3:3008694-3011437 FORWARD LENGTH=1551 Length=1551 Score = 1975 bits (1069), Expect = 0.0 Identities = 1130/1160 (97%), Gaps = 1/1160 (0%) Strand=Plus/Plus Query 2 GAGGCTGGAAGCGATGACCATGGCAGCATTTCTCGCGAGACGGCTTATTGGTAACCGATC 61 |||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| Sbjct 47 GAGGCTGGAAGCGATGACCATGACAGCATTTCTCGCGAGACGGCTTATCGGTAACGGATC 106 Query 62 GAGCCAGATTCTCGGGACTTCGAGTTCTAGCTCCGGTGCGTTCATTTCCGTTTCTAGGGC 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 107 GAGCCAGATTCTCGGGACTTCGAGTTCTAGCTCCGGTCCGTTCATTTCCGTTTCTAGGGC 166 Query 122 TTTCTTCTCCTCCACCACTCCGATCAAAGCAACTCTCTTTCCCGGTGATGGGATCGGTCC 181 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 167 TTTCTTCTCCTCCTCCACTCCGATCAAAGCTACTCTCTTTCCCGGTGATGGGATCGGTCC 226 Query 182 CGAAATCGCTGAATCTGTCAAACAGGTGTTTACTGCCGCTGATGTGACCATTGATTGGGA 241 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 227 CGAAATCGCTGAATCTGTCAAGCAGGTGTTTACTGCCGCTGATGTGGTTATTGATTGGGA 286 Query 242 CGAACAGTTTGTTGGTACTGAAGTAGATCCTAGAACCAATAGTTTCTTGACTTGGGAAAA 301 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 287 CGAACAGTTTGTTGGTACTGAAGTAGATCCTAGAACCAATAGTTTCTTGACATGGGATAA 346 Query 302 TCTTCAATCTGTGCTTAAAAACAAGGTTGGTTTGAAAGGACCAATGGCAACGCCAATTGG 361 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 347 TCTTCAATCTGTGCTTAAAAACAAGGTTGGTTTGAAAGGACCAATGGCTACTCCAATTGG 406 Query 362 AAAGGGTCACCGTTCCTTGAACCTTACTCTTAGGAAAGAGCTGAATTTGTATGCCAATGT 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 407 AAAGGGTCACCGTTCCTTGAACCTTACTCTTAGGAAAGAGCTGAATTTGTATGCCAATGT 466 Query 422 TAGGCCTTGCTACAGTCTTCCTGGTTACAAAACCCGTTATGATGATGTTGATCTCATTAC 481 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 467 TAGGCCTTGTTACAGTCTTCCTGGTTACAAAACCCGTTATGATGATGTTGATCTCATTAC 526 Query 482 CATTCGTGAAAACACCGAAGGAGAGTACAGTGGGCTTGAACACCAGGTCGTCAAGGGTGT 541 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 CATTCGTGAGAACACTGAAGGAGAGTACAGTGGGCTTGAACACCAGGTCGTCAAGGGTGT 586 Query 542 GGTGGAAAGTCTTAAAATTATTACCCGTAAGGCGAGTATGAGAGTTGCTGAGTATGCCTT 601 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 587 AGTGGAAAGTCTTAAAATTATTACCCGTAAGGCGAGTATGAGAGTTGCCGAGTATGCCTT 646 Query 602 TCTTTATGCCAAGACTCACGGAAGGAAGAAAGTTTCAGCAATTCATAAAGCCAACATTAT 661 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 647 TCTTTATGCCAAGACTCACGGAAGGAAGAAAGTTTCTGCAATTCACAAAGCCAACATTAT 706 Query 662 GCAGAAAACTGATGGTCTTTTCCTGCAGTGTTGTGATGAGGTTGCTAAGAAGTATCCTGA 721 ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct 707 GCAGAAAACTGATGGTCTTTTCCTGCAGTGTTGTGATGAAGTTGCTGCGAAGTATCCTGA 766 Query 722 GATATATTACGAGAAGGTTGTTATTGACAATTGCTGTATGATGCTTGTGAAAAACCCAGC 781 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 767 GATATATTACGAGAAGGTTGTTATTGACAATTGCTGTATGATGCTTGTGAAAAACCCAGC 826 Query 782 ACTTTTTGATGTCTTGGTGATGCCAAATCTCTATGGAGATATTATCAGCGATTTGTGTGC 841 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 827 ACTTTTTGATGTCTTGGTGATGCCAAATCTCTATGGAGATATTATCAGCGATTTGTGTGC 886 Query 842 CGGACTTGTTGGGGGACTAGGACTGACTCCTAGTATGAATATTGGGGAGGATGGTATTGC 901 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 887 TGGACTTGTTGGGGGACTAGGACTGACTCCTAGTATGAATATTGGGGAGGATGGTATTGC 946 Query 902 CCTTGCTGAAGCTGTTCACGGCTCTGCACCTGATATTGCTGGAAAGAACCTGGCGAACCC 961 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 947 CCTTGCTGAAGCTGTTCACGGCTCTGCACCTGATATTGCTGGAATGAACCTGGCGAACCC 1006 Query 962 AACAGCTTTGCTACTGAGTGGAGTGATGATGTTGCGGCACCTGAAGCTCAACAAACAAGC 1021 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1007 AACAGCTTTGCTACTGAGTGGAGTGATGATGTTGCGGCACCTGAAGCTCAACAAACAAGC 1066 Query 1022 AGAGCAAATCCACAGTGCCATCATCAACACAATAGCCGAGGGAAAGTATAGAACTGCTGA 1081 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1067 AGAGCAAATCCACAGTGCCATCATCAACACAATAGCCGAGGGAAAGTATAGAACTGCTGA 1126 Query 1082 TCTCGGAGGTACCTCAACCACAACAGATTTCACAAAAGCCATCTGTGATCATCTCTAAAC 1141 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1127 TCTCGGAGGTTCCTCAACTACAACAGATTTCACAAAAGCCATCTGTGATCATCTCTAAAC 1186 Query 1142 ACCCGT-AAAAACCAGAATT 1160 |||||| |||||||| |||| Sbjct 1187 ACCCGTGAAAAACCATAATT 1206 > AT5G03290.1 | Symbols: IDH-V | isocitrate dehydrogenase V | chr5:793974-796182 FORWARD LENGTH=1437 Length=1437 Score = 1227 bits (664), Expect = 0.0 Identities = 1008/1170 (86%), Gaps = 39/1170 (3%) Strand=Plus/Plus Query 5 GCTGGAAGCGATGACCATGGCAGCATTTCTCGCGAGACGGCTTATTGGTAACCGATCGAG 64 ||| ||||||||||||||||||||| ||| ||| ||||||| || || |||||||||| Sbjct 60 GCTTGAAGCGATGACCATGGCAGCAAATCTAGCGCGACGGCTGATCGGAAACCGATCGA- 118 Query 65 C-CAGATTCTCGG-GACTTCGAGTTCTAGCTCCGGTGC-GTTCATTTCCGTTTCTAGGGC 121 | ||||| || || | | | || |||||||| ||||| | | | ||| || ||||||| Sbjct 119 CTCAGATCCTTGGAGCCGT-GAACTCTAGCTCAGGTGCGGCT-AGTTCTGTCGCTAGGGC 176 Query 122 TTTCTTCTCCTCCACCACTCCGATCAAAGCAACTCTCTTTCCC-GGTGATGGGATCGGTC 180 ||||| |||||||||||||||||||| ||||||||| ||||| || ||||||||||||| Sbjct 177 TTTCTGCTCCTCCACCACTCCGATCACCGCAACTCTC-TTCCCTGGCGATGGGATCGGTC 235 Query 181 CCGAAATCGCTGAATCTGTCAAACAGGTGTTTACTGCCGCTGATGTGACC-ATTGATTGG 239 |||| ||||| |||||||||||| |||||||||| | |||| ||| ||| ||||| ||| Sbjct 236 CCGAGATCGCCGAATCTGTCAAAAAGGTGTTTACAACAGCTGGTGT-ACCAATTGAGTGG 294 Query 240 GACGAACAGTTTGTTGGTACTGAAG-TAGATCCTAGAACCA-ATAGTTTCTTGACTTGGG 297 || ||||| | |||||| |||| || ||||||| |||| || | ||||||||||| |||| Sbjct 295 GAAGAACACTATGTTGGGACTG-AGATAGATCCGAGAA-CACAGAGTTTCTTGACATGGG 352 Query 298 AAAATCTTC-AATCTGTGCTTAAAAACAAGGTTGGTTTGAAAGGACCAATGGCAACGCCA 356 ||| || || ||||||||| || |||||| |||||||||||||| |||||||| || ||| Sbjct 353 AAAGTC-TCGAATCTGTGCGTAGAAACAAAGTTGGTTTGAAAGGTCCAATGGCTACTCCA 411 Query 357 ATT-GGAAAGGGTCACCGTTCCTTGAACCTTACTCTTAGGAAAGAGCTGAATTTGTATGC 415 ||| ||||| ||||||||||| |||||||| ||||||||||||||||| ||| | ||||| Sbjct 412 ATTGGGAAA-GGTCACCGTTCTTTGAACCTGACTCTTAGGAAAGAGCTTAATCTATATGC 470 Query 416 CAATGTTAGGCCTTGCTACAGTCTTCCTGGTTACAAAACCCGTTATGATGATGTTGATCT 475 ||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 471 CAATGTTAGACCTTGTTACAGTCTTCCTGGTTACAAAACTCGTTACGATGATGTTGATCT 530 Query 476 CATTACCATTC-GTGAAAACACCGAAGGAGAGTACAGTGGGCTTGAACACCAGGTCGTCA 534 |||||||| || | |||||||| |||||||| |||||||| |||||||| ||||| || Sbjct 531 CATTACCA-TCAGAGAAAACACGGAAGGAGAATACAGTGGCCTTGAACATCAGGTTGT-T 588 Query 535 AG-GGTGTGGTGGAAAGTCTTAAAATTATTACCCGTAAGGCGAGTATGAGAGTTGCTGAG 593 || ||||||||||||||||||||||| ||||||||| |||||||| |||||||||| ||| Sbjct 589 AGAGGTGTGGTGGAAAGTCTTAAAATCATTACCCGTCAGGCGAGTTTGAGAGTTGCAGAG 648 Query 594 TATGCCTTTCTTTATGCCAAGACTCACGGAAGGA-AGAAAGTTTCAGCAATTCATAAAGC 652 ||||| ||||| |||||||||||||| |||| || ||| |||||| || || || ||||| Sbjct 649 TATGCTTTTCTCTATGCCAAGACTCATGGAA-GAGAGAGAGTTTCTGCTATCCACAAAGC 707 Query 653 CAACATTATGCAGAAAACTGATGGTCT-TTTCCTGC-AGTGTTGT-GATGAGGTTGCTAA 709 ||||||||||||||||||||| ||||| ||| || | |||||||| | |||||||||| | Sbjct 708 CAACATTATGCAGAAAACTGACGGTCTCTTT-CT-CAAGTGTTGTCG-TGAGGTTGCTGA 764 Query 710 GAAGTATCCTGAGATATA-TTACGAGAAGGTTGTTATTGACAATTGCTGTATGATGCTTG 768 ||||||||||||||| | ||||||| |||| ||||||||||| |||||||||||||||| Sbjct 765 GAAGTATCCTGAGAT-CACTTACGAGGAGGTCGTTATTGACAACTGCTGTATGATGCTTG 823 Query 769 TGAAAAACCCAGCACTTTTTGATGTCTTGGTGATGCCAAATCTCTATGGAGATATTATCA 828 |||||||||||||||||||||||||||||||||||||||| || || || || ||||| | Sbjct 824 TGAAAAACCCAGCACTTTTTGATGTCTTGGTGATGCCAAACCTGTACGGTGACATTATTA 883 Query 829 GCGATTTGTGTGCCGGACTTG-TTGGGGGACTAGGACTGACTCCTAGTATG-AATATTGG 886 ||||| ||||||||||| ||| |||| ||||||||| ||||||| ||| || |||||||| Sbjct 884 GCGATCTGTGTGCCGGA-TTGGTTGGAGGACTAGGATTGACTCCAAGT-TGTAATATTGG 941 Query 887 GGAGGATGGTATTGCCCTTGCTGAAGCTGTTCACGGCTCTGCACCTGATATTGCTGGAAA 946 || |||||| | |||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct 942 AGAAGATGGTGTAGCCCTTGCTGAAGCAGTTCACGGTTCTGCACCTGATATCGCTGGAAA 1001 Query 947 GAACCTGGCGAACCCAACAGCTTTGCTACTGAGTGGAGTGATGATGTTGCGGCACCTGAA 1006 |||| ||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct 1002 GAACTTGGCGAACCCAACCGCGTTGCTTCTGAGTGGAGTGATGATGTTGCGTCACCTGAA 1061 Query 1007 GCTCAACAAACAAGCAGAGCAAATCCACAGTGCCATCATCAACACAATAGCCGAGGG-AA 1065 | ||||| |||||||||| |||||||||||||| ||||||||||| ||||| ||||| || Sbjct 1062 GTTCAACGAACAAGCAGAACAAATCCACAGTGCAATCATCAACACCATAGCAGAGGGCAA 1121 Query 1066 AGTATAGAACTGCTGATCTCGGAGGTACCTCAACCACAACAGATTTCACAAAAGCCATCT 1125 | || ||||| || ||||| ||||||| || ||||| || || |||||||| || |||| Sbjct 1122 A-TACAGAACCGCGGATCTTGGAGGTAGTTCGACCACCACGGAATTCACAAAGGCAATCT 1180 Query 1126 GTGATCATCTCTAAACACCCGTAAAAACCA 1155 |||||||||||| |||| | |||||| ||| Sbjct 1181 GTGATCATCTCTGAACATC-GTAAAATCCA 1209 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56927418030 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5