BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg928723
Length=2166
Score E
Sequences producing significant alignments: (Bits) Value
AT3G10340.1 | Symbols: PAL4 | phenylalanine ammonia-lyase 4 | c... 3190 0.0
AT5G04230.2 | Symbols: PAL3 | phenyl alanine ammonia-lyase 3 | ... 1275 0.0
> AT3G10340.1 | Symbols: PAL4 | phenylalanine ammonia-lyase 4 |
chr3:3204013-3208022 FORWARD LENGTH=2584
Length=2584
Score = 3190 bits (1727), Expect = 0.0
Identities = 2030/2177 (93%), Gaps = 18/2177 (1%)
Strand=Plus/Plus
Query 1 CCGTTTTCTTTAACCGGGTCGGCGCTCATGGAGCTATGCAATCAAAACAACCACATCA-- 58
||| |||||||||||| |||||||| |||||||||||||||||||||||| |||||||
Sbjct 221 CCGGTTTCTTTAACCGAGTCGGCGCGCATGGAGCTATGCAATCAAAACAATCACATCACC 280
Query 59 -----C-C-GGCGATCCGTTGAACTGGAACGCGACGGCGGACGCTTTGAAAGGGAGCCAC 111
| | ||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 281 GCCGTCTCGGGCGATCCGTTGAACTGGAACGCGACGGCCGAAGCTTTGAAAGGGAGCCAC 340
Query 112 TTGGACGAGGTGAAACGAATGGTGGAAGATTATAGGAAAGGGGCGGTGAAGTTAGGAGGT 171
|||| |||||||||||||||||| |||| |||||||||| |||||||||||||||||||
Sbjct 341 CTGGATGAGGTGAAACGAATGGTGAAAGAGTATAGGAAAGAGGCGGTGAAGTTAGGAGGT 400
Query 172 GAGACGTTGACGATTGGTCAAGTCGCCGCCGTCGCTAgaggaggagaaggaggagt-tac 230
||||| ||||||||||||||||| |||||||| ||||||||| | | ||||||| | |||
Sbjct 401 GAGACTTTGACGATTGGTCAAGTAGCCGCCGTGGCTAGAGGA-G-G-AGGAGGA-TCTAC 456
Query 231 ggtggagctggaggaggaggCTCGTGCCGGAGTCAAGGCGAGTAGCGAATGGGTGATGGA 290
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 457 GGTGGAGCTAGCGGAGGAGGCTCGTGCCGGAGTCAAGGCGAGTAGCGAATGGGTGATGGA 516
Query 291 GAGCATGAACCGAGGAACCGACAGTTATGGAGTCACCACAGGGTTTGGTGCTACTTCCCA 350
|||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct 517 GAGCATGAACCGAGGAACGGACAGTTATGGAGTTACCACAGGGTTTGGTGCAACTTCCCA 576
Query 351 TAGAAGAACTAAACAAGGCGGTGCACTTCAAAATGAGCTTATTAGGTTCTTGAACGCCGG 410
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 577 TAGAAGAACCAAACAAGGCGGTGCACTTCAAAATGAGCTTATTAGGTTCTTGAATGCCGG 636
Query 411 AATATTTGGCATCGGCGCCGGAGACACGACACACACGTTGCCAAAGCCGACGACAAGAGC 470
|||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||
Sbjct 637 AATATTTGGCCCCGGCGCCGGGGACACGTCACACACGTTGCCAAAGCCGACAACAAGAGC 696
Query 471 GGCAATGCTCGTCCGTGTCAACACTCTCCTCCAAGGCTACTCCGGTATACGCTTCGAGAT 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 GGCAATGCTCGTCCGTGTCAACACTCTCCTCCAAGGCTACTCCGGTATACGCTTCGAGAT 756
Query 531 TCTCGAAGCCATTACAAAGCTTCTCAACCACGAAATCACTCCGTGCCTCCCTCTTCGTGG 590
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 757 TCTCGAAGCAATTACAAAGCTTCTCAACCACGAAATCACTCCGTGCCTCCCTCTCCGTGG 816
Query 591 CACCATCACGGCCTCCGGTGACCTTATCCCTCTCTCTTACATCGCCGGACTCCTCACCGG 650
||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||| ||
Sbjct 817 CACCATCACCGCCTCCGGTGACCTTGTTCCTCTCTCTTACATCGCCGGACTTCTCACTGG 876
Query 651 CCGTCCTAACTCCAAAGCCGTGGGTCCCT-TCGGTGAGACTCTCACTGCCTCTGAGGCCT 709
|||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 877 CCGTCCCAACTCCAAAGCCGTGGGTCCCTCT-GGTGAGACTCTCACTGCCTCTGAGGCCT 935
Query 710 TTAAGCTCGCGGGAGTATCGTCtttttttGAGCTTCAGCCTAAGGAAGGACTAGCACTTG 769
|||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||
Sbjct 936 TTAAGCTCGCCGGAGTATCGTCCTTTTTCGAGCTGCAGCCTAAGGAAGGACTAGCACTTG 995
Query 770 TGAACGGGACAGCGGTTGGATCGGGTTTGGCCTCGACGGTTCTGTTCGATGCAAATATTT 829
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 996 TGAACGGGACAGCGGTTGGATCGGGTTTGGCCTCAACGGTTTTGTTCGATGCAAATATTT 1055
Query 830 TGGCTGTTTTGTCGGAGGTTATGTCTGCCATGTTCGCAGAGGTTATGCAAGGGAAACCGG 889
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1056 TGGCTGTTTTATCGGAAGTTATGTCTGCCATGTTCGCAGAGGTTATGCAAGGGAAACCGG 1115
Query 890 AGTTTACCGACCATCTTACGCATAAACTCAAGCACCATCCCGGTCAGATCGAAGCAGCGG 949
||||||| || |||||||||||||| ||||||||||||||||||||||||||||| || |
Sbjct 1116 AGTTTACAGATCATCTTACGCATAAGCTCAAGCACCATCCCGGTCAGATCGAAGCCGCCG 1175
Query 950 CGATTATGGAACATATATTGGACGGAAGCTCTTACGTTAAAGAAGCTCAACTTATCCACG 1009
| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 1176 CAATTATGGAACATATATTAGACGGAAGCTCTTACGTTAAAGAAGCTCAACTTCTCCACG 1235
Query 1010 AAATGGATCCTCTTCAAAAACCTAAACAAGATCGGTACGCTTTACGTACATCGCCGCAAT 1069
||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct 1236 AAATGGATCCTCTTCAAAAACCTAAACAAGATCGGTACGCTTTACGTACGTCACCACAAT 1295
Query 1070 GGCTTGGCCCGCAGATTGAAGTGATCAGATCGGCCACTAAAATGATTGAGCGTGAGATCA 1129
||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 1296 GGCTTGGGCCGCAGATTGAAGTGATCAGAGCGGCTACTAAAATGATTGAGCGTGAGATCA 1355
Query 1130 ACTCGGTTAACGATAACCCTTTGATAGATGTGTCAAGGAATAAGGCTTTGCACGGCGGGA 1189
|||| ||||| ||||||||||||||||||||||| ||||| ||||| |||||||| || |
Sbjct 1356 ACTCTGTTAATGATAACCCTTTGATAGATGTGTCGAGGAACAAGGCGTTGCACGGTGGAA 1415
Query 1190 ATTTCCAAGGGACACCAATTGGTGTCGCCATGGATAATTCTCGTCTAGCCATTGCTTCGA 1249
|||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||| |
Sbjct 1416 ATTTCCAAGGGACACCGATCGGTGTTGCCATGGATAATTCCCGTCTAGCCATTGCTTCCA 1475
Query 1250 TAGGGAAACTCATGTTCGCCCAGTTTTCTGAACTAGTGAACGATTTCTACAACAATGGTT 1309
| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1476 TTGGGAAACTCATGTTTGCGCAGTTTTCTGAACTAGTGAACGATTTCTACAACAATGGTT 1535
Query 1310 TGCCTTCTAATCTATCCGGTGGGAGAAACCCTAGTCTTGATTACGGATTTAAAGGCGCGG 1369
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1536 TGCCTTCTAATCTATCTGGTGGGAGAAACCCTAGTCTTGATTACGGGTTTAAAGGCGCGG 1595
Query 1370 AGATAGCCATGGCTTCTTATTGCTCCGAGCTTCAGTTCTTGGCTAATCCGGTGACCAACC 1429
| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1596 AAATAGCCATGGCTTCTTATTGCTCCGAGCTTCAGTTCCTGGCTAATCCCGTGACCAACC 1655
Query 1430 ATGTCCAAAGCGCAGAGCAGCATAACCAAGATGTTAATTCCCTAGGGTTGATCTCAAGCC 1489
||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| |||
Sbjct 1656 ATGTCCAAAGCGCAGAGCAGCATAACCAAGACGTTAATTCCCTAGGGCTAATCTCTAGCA 1715
Query 1490 GGAAAACCGCAGAAGCAGTCGATATCCTCAAGCTAATGTCCACGACCTATTTAGTCGCGC 1549
||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1716 GGAAAACTGCAGAAGCAGTGGATATCCTCAAGCTAATGTCCACAACCTACTTAGTCGCGC 1775
Query 1550 TGTGCCAAGCCATTGATCTAAGACATCTTGAAGAGAATCTGAAGAAAGCAATTAAATCTG 1609
| ||||||||| |||||||||||||||||||||||||||||||||| || ||||||| |
Sbjct 1776 TTTGCCAAGCCGTTGATCTAAGACATCTTGAAGAGAATCTGAAGAAGGCGGTTAAATCAG 1835
Query 1610 CAGTGAGTCAGGTGGCGAAACGGGTCTTAACCGTTGGGGTCAATGGTGAGCTACATCCTT 1669
||||||||||||||||||||||||||||||||||||| | ||| || ||||||||||| |
Sbjct 1836 CAGTGAGTCAGGTGGCGAAACGGGTCTTAACCGTTGGTGCCAACGGGGAGCTACATCCGT 1895
Query 1670 CGAGGTTCACTGAACGCGATGTTCTCCAAGTGGTTGACCGAGAATACGTGTTCTCATACG 1729
| |||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1896 CAAGGTTCACAGAACGTGATGTCCTCCAAGTGGTTGACCGAGAGTACGTGTTCTCATACG 1955
Query 1730 CAGACGATCCCTGCAGCCTCACTTACCCGTTAATGCAGAAACTTAGACACATTCTTGTAG 1789
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1956 CAGACGATCCCTGCAGCCTCACTTACCCGCTAATGCAGAAACTTAGACACATTCTTGTAG 2015
Query 1790 ATCACGCTTTAGCGGATCCAGAACGCGAGGCCAATTCCGCTACATCAGTTTTCCAGAAAA 1849
| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct 2016 ACCACGCTTTAGCGGATCCAGAACGCGAGGCCAATTCCGCGACATCGGTTTTCCACAAAA 2075
Query 1850 TCGGAGCTTTTGA-GTCCGAGCTGAAACTGCTTCTCCCTAAAGAAGTGGAACGTGTCCGG 1908
||||||||||||| | ||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 2076 TCGGAGCTTTTGAAG-CCGAGCTGAAACTGCTTCTCCCTAAAGAAGTAGAACGCGTCCGG 2134
Query 1909 GTTGAGTACGAGGAAGGATCCTCGACTATAGCTAACCGGATTAAGGAATGTCGGTCTTAT 1968
||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||||||
Sbjct 2135 GTTGAATACGAGGAAGGAACATCGGCTATAGCTAACCGGATTAAGGAATGTCGGTCTTAT 2194
Query 1969 CCGCTGTACCGGTTTGTCCGCAACGAGCTAGATACTGAACTGCTCACTGGAGAGAATGTT 2028
|| |||| |||||||||||| | |||||| ||||||||||||| |||||||||||||||
Sbjct 2195 CCATTGTATCGGTTTGTCCGCGATGAGCTAAATACTGAACTGCTTACTGGAGAGAATGTT 2254
Query 2029 CGGTCGCCGGGAGAGGAGTTTGATAAAGTGTTCTCGGCGATTTCTGATGGAAAGCTTATT 2088
|||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 2255 CGGTCGCCAGGAGAGGAGTTTGATAAAGTGTTCTTAGCGATTTCTGATGGAAAACTTATT 2314
Query 2089 GATCCGTTGTTGGAATGTCTCAAGGAGTGGAACGGAGCTCCGATTCCGATCTGTTAAAAA 2148
|||||||||||||||||||||||||||||||||||||||||| || | ||||||| ||||
Sbjct 2315 GATCCGTTGTTGGAATGTCTCAAGGAGTGGAACGGAGCTCCGGTTTCAATCTGTTGAAAA 2374
Query 2149 TCtttttttATAGATCT 2165
||||||| ||||||||
Sbjct 2375 TCTTTTTCGATAGATCT 2391
> AT5G04230.2 | Symbols: PAL3 | phenyl alanine ammonia-lyase 3
| chr5:1160634-1163898 FORWARD LENGTH=2485
Length=2485
Score = 1275 bits (690), Expect = 0.0
Identities = 1670/2128 (78%), Gaps = 127/2128 (6%)
Strand=Plus/Plus
Query 73 AACTGGAACGCGA-CGGCGGACGCTTTGAAAGGGAGCCACTTGGACGAGGTGAA-ACGAA 130
|||||||| | | ||||||| ||||| |||||||||||| |||| |||||||| | | |
Sbjct 243 AACTGGAATG-TAGCGGCGGAGGCTTTAAAAGGGAGCCACCTGGAGGAGGTGAAGAAG-A 300
Query 131 TGGTGGAA-GATTATAGGAAAGGGGCGGTGAAGTTAGGAGGTGAGACGTTGACGATTGGT 189
|||| ||| |||||||||||||| ||||| || |||| || |||||| |||| || |||
Sbjct 301 TGGT-GAAGGATTATAGGAAAGGAACGGTGCAGCTAGGCGGAGAGACGCTGACCATCGGT 359
Query 190 CAAGTCGCCGCCGTCGCTAgaggaggagaaggaggagttacggtggagctggaggaggag 249
|| || || || || || || | | | |||| | || |||||||| ||||||
Sbjct 360 CAGGTTGCGGCAGTAGC--GA-G-TG-G-AGGA-CCG--ACAGTGGAGCTTTCTGAGGAG 410
Query 250 gCTCGTGCCGGAGTCAAGGCGAGTAGCGAATGGGTGATGGAGAGCATGAACCGAGGA-AC 308
||||| | ||| || ||||||||||| || ||||||||||||||||||||||| || ||
Sbjct 411 GCTCGGGGCGGTGTGAAGGCGAGTAGTGACTGGGTGATGGAGAGCATGAACCG-TGATAC 469
Query 309 CGACAGTTAT-GGAGTCACCACAGGGTTTGGTGCTA-CTTCCCATAGAAGAACTAAACAA 366
|||| ||| ||| ||||||| || |||||| | | |||| | ||| || ||| | |||
Sbjct 470 GGACACATATGGGA-TCACCACTGGATTTGGTTC-ATCTTCTCGTAGGAGGACTGACCAA 527
Query 367 GGCGGTGCACTTCAAAATGAGCTTATTAGGT-TCTTGAACGCCGGAATATTTGGC-ATCG 424
|| | ||| |||||||| ||||||||||||| | ||||||||||| ||| || || | ||
Sbjct 528 GGTGCTGCTCTTCAAAAAGAGCTTATTAGGTAT-TTGAACGCCGGGATA-TTCGCTACCG 585
Query 425 GCGCCG--GA-GAC-AC--GACACACACG-TTGCCAAAGCCGACGACAAGAGCGGCAATG 477
|| || || ||| || | || ||||| || || |||| | || ||||| || |||
Sbjct 586 GCAACGAAGATGACGACAGGTCAAACACGCTT-CCCCGGCCGGCTACTAGAGCAGCGATG 644
Query 478 CTCGTCCGTGTCAACACTCTCCTCCAAGGCTACTCCGGTATACGCTTCGAGATTCTCGAA 537
||| ||||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 645 CTCATCCGTGTAAACACCCTCCTCCAAGGCTACTCTGGTATACGCTTTGAGATCCTCGAA 704
Query 538 GCCATTACAA-AGCTTCTCAACCACGAAATCACTCCG-TGCCTCCCTCTTCGTGGCACCA 595
||||| |||| | || |||||| | |||| || ||| | ||| ||||| || |||||||
Sbjct 705 GCCATCACAACA-CTCCTCAACTGCAAAATTACACCGCT-CCTTCCTCTCCGAGGCACCA 762
Query 596 TCACGGCCTCCGGTGA-C-CTTATCCCTCTCTCTTACATCGCCGGACTCCTCACCGGCCG 653
| || |||||||| || | | | ||| | | || || ||||| ||| |||||| ||| ||
Sbjct 763 TTACCGCCTCCGGGGATCTCGT-TCCGT-TATCCTATATCGCTGGATTCCTCATCGGGCG 820
Query 654 TCCTAACTCCAAAGCCGTGGGTCCCTTC-GGTGAGACT-CTCACTGCCTCT-GAGGCCTT 710
|| |||||| | ||||||| ||| || || |||| | |||||||||| | ||||||||
Sbjct 821 CCCCAACTCCCGATCCGTGGG-CCCCTCTGGCGAGA-TCCTCACTGCCT-TGGAGGCCTT 877
Query 711 TAAGCTCGCGGGAGTATCGTCtttttttGAGCTTCA-GCCTAAGGAAGGACTAGCACTTG 769
|||||||| ||||||||||||||||| || | ||| |||||| ||||| || || || |
Sbjct 878 CAAGCTCGCTGGAGTATCGTCTTTTTTCGAAC-TCAGGCCTAAAGAAGGGCTTGCGCTCG 936
Query 770 TGAACGGGACAGCGGTTGGATCGGGTTTGGCCTCGACGGTTCTGTTCGATGCAAATATTT 829
|||| ||||| ||||| || || | ||| ||||| ||||| |||| |||||| || ||||
Sbjct 937 TGAATGGGACTGCGGTGGGGTCTGCTTTAGCCTCTACGGTACTGTACGATGCCAACATTT 996
Query 830 TGGCT-GTTTTGTCGGAGGTT-ATGTCTGCCATGTTCGCAGAGGTTATGCAAGGGAAACC 887
||| | ||||| || || ||| | || |||||||| |||||||||||||| ||||||||
Sbjct 997 TGG-TGGTTTTCTCCGAAGTTGCT-TCCGCCATGTTTGCAGAGGTTATGCAGGGGAAACC 1054
Query 888 GGAGTTTACCGACCATCTTACGCATAAACTCAAGCACCATCCCGGTCAGATCGAAGCAGC 947
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 1055 AGAGTTTACCGATCATCTTACGCATAAACTCAAGCACCATCCTGGTCAGATCGAAGCCGC 1114
Query 948 GGCGATTATGGAACATATAT-TGGACGGAAGCTCTTACGTTAAAGAAGCTCAACTTATCC 1006
|| || ||||| ||||| | | |||||||||||||| || |||||||||| || | |||
Sbjct 1115 CGCTATCATGGAGCATAT-TCTAGACGGAAGCTCTTATGTAAAAGAAGCTCTACATCTCC 1173
Query 1007 ACGAA-ATGGATCCTCTTCAAAAACCTAAACAAGATCGGTACG--CTT--T-ACG-T--- 1056
|| || || ||||| ||||| |||||||||||||||||||| | ||| | ||| |
Sbjct 1174 AC-AAGATTGATCCGCTTCAGAAACCTAAACAAGATCGGTATGTTCTTGGTTACGCTCTG 1232
Query 1057 --A-CATCGCCGCAATGGCTTGGCCCGCAGATTGAAGTGATCAGATCGGCCACTAAAATG 1113
| |||| |||||||||||||| ||||||||||| ||||| ||| | || ||||| |||
Sbjct 1233 CGAACATCTCCGCAATGGCTTGGACCGCAGATTGAGGTGATAAGAGCAGCGACTAAGATG 1292
Query 1114 ATTGAGCGTGAGATCAACTCGGTTAACGATAACCCTTTGATAGATGTGTCAAGGAATAAG 1173
|| || |||||||| ||||| || ||||||||||||||||| ||||| ||||| || ||
Sbjct 1293 ATCGAACGTGAGATAAACTCAGTAAACGATAACCCTTTGATCGATGTTTCAAGAAACAAA 1352
Query 1174 GCTTTGCACGGCGGGAATTTCCAAGGGACACCAATTGGTGTCGCCATGGATAATTCTCGT 1233
||| | || || ||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1353 GCTATCCATGGTGGGAACTTCCAGGGGACACCAATTGGTGTCGCCATGGATAACACTCGT 1412
Query 1234 CTAGC-CATTGCTTCGATAGGGAAACTCATGTTCGCCCAGTTTTCTGAACTAGTGAACGA 1292
||||| | ||||||| || ||||| || |||||||| ||||| ||||||| || || ||
Sbjct 1413 CTAGCAC-TTGCTTCTATCGGGAAGCTAATGTTCGCTCAGTTCACTGAACTCGTAAATGA 1471
Query 1293 TTTCTACAACAATGGTTTGCCTTCTAATCTATCCGGTGGGAGAAACCCTAGTCTTGATTA 1352
|||||||||||| || || || ||||||||||| ||||| ||||||||||||||||||||
Sbjct 1472 TTTCTACAACAACGGGTTACCCTCTAATCTATCTGGTGGTAGAAACCCTAGTCTTGATTA 1531
Query 1353 CGGATTTAAAGGCGCGGA-GATAGCCATGGCTTCTTATTGCTCCGAGCTTCAGTTCTTGG 1411
||| || |||||||| || | | |||||||||||||||||||| |||||||||||| | |
Sbjct 1532 CGGGTTAAAAGGCGCAGAAG-TCGCCATGGCTTCTTATTGCTCAGAGCTTCAGTTCCTAG 1590
Query 1412 CTAATCCGGTGACCAACCATGTCCAAAGCGCAGAGCAGCATAACCAAGATGTTAATTCCC 1471
| ||||| ||||| ||||||||| ||||||| || || || ||||||||||| || |
Sbjct 1591 CAAATCCTGTGACGAACCATGTCGAAAGCGCTTCTCAACACAATCAAGATGTTAACTCTC 1650
Query 1472 TAGGGTTGATCTCAAGCCGGAAA-ACCGCAGAAGCAGTCGATATCCTCAAGCTAATGTCC 1530
| ||| ||||||| ||||| || || |||||||| || | |||||||||||| |||||
Sbjct 1651 TTGGGCTGATCTCGAGCCG-AACGACAGCAGAAGCTGTGGTTATCCTCAAGCTCATGTCA 1709
Query 1531 ACGACCTATTTAGTCGCGCTGTGCCAAGCCATTGATCTAAGACATCTTGAAGAGAAT-CT 1589
||||| || || || || ||||||||||| ||||||| ||||| |||||||| ||| ||
Sbjct 1710 ACGACTTACTTGGTAGCTTTGTGCCAAGCCTTTGATCTGAGACACCTTGAAGA-AATTCT 1768
Query 1590 GAAGAAAGCAATTAAATCTGCAGTGAGTCAGGTG-GCGAAACGGGTCTTAACCGTTGGGG 1648
|||||||| |||| | | || | | | || || | || | | || |||| |
Sbjct 1769 CAAGAAAGCGGTTAA-T--G-AG-GT-T--G-TGAGCCACACTGC-CAAAAGCGTTCTAG 1818
Query 1649 TCAATGGTGAGCTACAT-CCTTCGAGGTTCACTGAACGCGATGTTCTCCAAGTGGTTGAC 1707
|||| | | | ||| || | | ||| || || || |||| ||| || ||
Sbjct 1819 -CAATCGA-A-C--CATTCCG-CAAA---CAC-GA-CG--ATATTCTTGGAGTTGTCAAC 1865
Query 1708 CGAGAATACGTGTTCTCATACGCAGACGATCCCT-GCAGCCTCACTTACCCGTTAATGCA 1766
|| |||||||| ||||| || | || || ||| ||||||||||| |||| ||||||||
Sbjct 1866 CGCGAATACGTCTTCTCCTATGTTGATGA-CCCAAGCAGCCTCACTAACCCTTTAATGCA 1924
Query 1767 GAAACTTAGACACATTCT-TGTAGATCAC-GCTTTAGCGGATCCAGAACGCGAGGCCAAT 1824
||| || ||||| | || | | || || |||||||| || || ||| ||||| |
Sbjct 1925 GAAGCTGAGACATGTCCTCT-TCGA-CAAAGCTTTAGCTGAACCGGAAGGCGAG---A-- 1977
Query 1825 TCCGCTACATCAGTTTTCCAGAAAATCGGAGCTTTTGAGTCCGAGCTGAAACTGCTTCTC 1884
||| ||| | ||||| | |||||||||||| || ||| ||||||||||| | || |||
Sbjct 1978 -CCG--ACA-CGGTTTTTCGGAAAATCGGAGCGTTCGAGGCCGAGCTGAAATTTCTCCTC 2033
Query 1885 CCTAAAGAAGTGGAACGTGTCCGGGTTGAGTACGAGGAA-GGATCC-TCGACTATAGCTA 1942
||||||||||||||||| ||| || ||||||||| || || | | | | | | ||||
Sbjct 2034 CCTAAAGAAGTGGAACGAGTCAGGACAGAGTACGAG-AACGG-TACATTTAATGTGGCTA 2091
Query 1943 ACCGGATTAAGGAA-TGTCGGTCTTATCCGCTGTACCGGTTTGTCCGCAACGAGCTAGAT 2001
|||| || ||| || ||||| || |||||||||||||||||||| || || || || ||
Sbjct 2092 ACCGAATCAAG-AAGTGTCGATCGTATCCGCTGTACCGGTTTGTGCGGAATGAACTCGAG 2150
Query 2002 ACTGAACT-GCTCACTGGAGAGAATGTTCGGTCGCCGGGAGAGGAGTTTGATAAAGTGTT 2060
|| || | ||| || |||||| |||||||||| ||||||||||| ||||| ||||| ||
Sbjct 2151 AC-GAGGTTGCTAACCGGAGAGGATGTTCGGTCACCGGGAGAGGATTTTGACAAAGTCTT 2209
Query 2061 CTCGGCGATTTCTGATGGAAAGCTTATTGATCCGT-TGTTGGAATGTCTCAAGGAGTGGA 2119
| ||| || ||| | ||||| || || ||||| | |||| |||||||| || |||||||
Sbjct 2210 CAGGGCTATATCTCAAGGAAAACTCATAGATCC-TCTGTTTGAATGTCTGAAAGAGTGGA 2268
Query 2120 ACGGAGCTCCGATTCCGATCTGTTAAAA 2147
|||| ||||||||| | ||||| |||||
Sbjct 2269 ACGGTGCTCCGATTTCTATCTGCTAAAA 2296
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107429166300
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5