BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg928970 Length=651 Score E Sequences producing significant alignments: (Bits) Value AT3G12490.2 | Symbols: ATCYSB, ATCYS6, CYSB | cystatin B | chr3... 933 0.0 > AT3G12490.2 | Symbols: ATCYSB, ATCYS6, CYSB | cystatin B | chr3:3960401-3961915 REVERSE LENGTH=866 Length=866 Score = 933 bits (505), Expect = 0.0 Identities = 604/652 (93%), Gaps = 5/652 (1%) Strand=Plus/Plus Query 1 TTTAGGGTTCTGCAACGACGACATGGCTTTACTCGGTGGCGTTCGCGATGTTCCTGCTAA 60 |||||| ||||||||||| || ||||||||| |||| || ||| ||||||| |||||||| Sbjct 117 TTTAGGCTTCTGCAACGAAGAGATGGCTTTAGTCGGAGGTGTTGGCGATGTCCCTGCTAA 176 Query 61 CCAGAACAGTGGTGAGGTCGAGAGCCTCGCTCGTTTCGCTGTCGATGAGCACAACAAGAA 120 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 177 TCAGAACAGTGGTGAGGTTGAGAGCCTCGCTCGTTTCGCTGTCGATGAACACAACAAGAA 236 Query 121 AGAGAATGCACTTCTTGAGTTTGCTAGAGTGGTGAAAGCTAAAGAACAAGTTGTAGCCGG 180 |||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||| Sbjct 237 AGAGAATGCACTTCTTGAGTTTGCGAGAGTTGTGAAGGCGAAAGAACAAGTTGTAGCCGG 296 Query 181 AACAATGCATCACCTGACTCTGGAGATTCTCGATGCAGGGGAGAAAAAGCTTTACGAAGC 240 |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||| Sbjct 297 AACACTGCATCACCTGACTCTGGAGATTCTCGAGGCAGGACAGAAGAAGCTTTACGAAGC 356 Query 241 CAAAGTGTGGGTGAAGTCATGGTTGAACTTTAAGGAGTTACAGGAGTTCAAGCCTGCCGC 300 |||||||||||| ||| | |||||||||||||| ||||||||||||||||||||| || Sbjct 357 CAAAGTGTGGGTCAAGCCGTGGTTGAACTTTAAAGAGTTACAGGAGTTCAAGCCT---GC 413 Query 301 CAGTGATGCCCCTGCAATCACTCCCTCCGATCTTGGCTGCAAACAAGATGAACATGAATC 360 ||||||||||||||| |||||| ||||||||||||||||||| |||| |||||||||||| Sbjct 414 CAGTGATGCCCCTGCTATCACTTCCTCCGATCTTGGCTGCAAGCAAGGTGAACATGAATC 473 Query 361 TGGATGGAGGGAAGTTCCAGGAGATGATCCAGAAGTGCAGCACGTTGCTGAGCATGCTGT 420 |||||||||||||||||| |||||||||||||||||| |||| ||||||||||| ||||| Sbjct 474 TGGATGGAGGGAAGTTCCCGGAGATGATCCAGAAGTGAAGCATGTTGCTGAGCAGGCTGT 533 Query 421 CAAGACCATCCAGCAGAGGTCTAACTCCTTGTTCCCTTATCAACTTCTGGAGGTTGTGCA 480 ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 534 CAAGACCATTCAGCAGAGGTCTAACTCCTTGTTCCCTTATGAACTTCTGGAGGTTGTGCA 593 Query 481 TGCTAACGCTGAGGTTACCGGCGAGGCTGCCAAATACAACATGCTGCTGAAGTTGAAGAG 540 |||||| |||||||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct 594 TGCTAAAGCTGAGGTAACCGGCGAGGCTGCAAAATACAACATGCTACTGAAGTTGAAGAG 653 Query 541 GGGAGAAAAAGAGGAAAAGTTCAAGGTGGAAGTTCACAAGAACCATGAAGGTGCTCTTCA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 654 GGGAGAAAAAGAGGAAAAGTTCAAGGTGGAAGTTCACAAGAACCATGAAGGTGCTCTTCA 713 Query 601 -CTTCAACCGCATGGAGCAACACCATGACTAGTCCCTCTCCCCTGTTTATGT 651 || ||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct 714 TCT-CAACCACGCGGAGCAACACCATGACTAGTCCCTCTCCTTTGTTTATGT 764 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31446576022 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5