BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg929332 Length=253 Score E Sequences producing significant alignments: (Bits) Value AT3G15353.1 | Symbols: MT3, ATMT3 | metallothionein 3 | chr3:51... 405 1e-112 > AT3G15353.1 | Symbols: MT3, ATMT3 | metallothionein 3 | chr3:5180667-5181400 REVERSE LENGTH=443 Length=443 Score = 405 bits (219), Expect = 1e-112 Identities = 240/250 (96%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 5 TTTTCAAAAACTCAATCATGTCAAGCAACTGCGGAAGCTGCGACTGTGCTGACAAGACCC 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59 TTTTCAAAAACTCAATCATGTCAAGCAACTGCGGAAGCTGCGACTGTGCTGACAAGACCC 118 Query 65 AGTGCGTGAAGAAGGGAACCAGCTACACCTTCGACATCGTCAAGACTCAGGAGAGCTACA 124 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 119 AGTGCGTAAAGAAGGGAACCAGCTACACCTTCGACATCGTCGAGACTCAGGAGAGCTACA 178 Query 125 AGGAGGCCATGATCATGGACGTTGGTGCAGAGGAGAACGACGCGAATTGCAACTGCAAGT 184 |||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||| Sbjct 179 AGGAGGCCATGATCATGGACGTTGGTGCCGAGGAGAACAACGCAAATTGCAAGTGCAAGT 238 Query 185 GCGGCTCCACTTGCAGCTGCGTCAACTGCACTTGCTGCCCCAACTAAA-AATGCTTCTTT 243 |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 239 GCGGCTCCTCTTGCAGCTGCGTCAACTGCACTTGCTGCCCCAACTAATGAA-GCTTCTTT 297 Query 244 AATCAAAATG 253 |||||||||| Sbjct 298 AATCAAAATG 307 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11511314521 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5