BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg929544

Length=537
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G17020.1 | Symbols:  | Adenine nucleotide alpha hydrolases-l...   821    0.0  


> AT3G17020.1 | Symbols:  | Adenine nucleotide alpha hydrolases-like 
superfamily protein | chr3:5802536-5804157 REVERSE LENGTH=778
Length=778

 Score =  821 bits (444),  Expect = 0.0
 Identities = 496/522 (95%), Gaps = 0/522 (0%)
 Strand=Plus/Plus

Query  16   agagTGAGTTATGGCGGAGAGTGGTGGACGGAGAATCGGAGTGGCGGTGGATTTCTCGGA  75
            |||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct  85   AGAGAGAGTTATGGCGGAGAGTGGTGGACGAAGGATCGGAGTGGCGGTGGATTTCTCGGA  144

Query  76   GTGTAGCAAGAAGGCTCTGAGCTGGGCGATCGATAACGTGGTTCGCGACGGAGATCATCT  135
             || || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  145  CTGCAGTAAGAAGGCTCTGAGCTGGGCGATCGATAACGTGGTTCGCGACGGAGATCATCT  204

Query  136  AATCCTAATCACCATCGCTCACGATATGAATTACGAGGAAGGAGAGATGCAGCTATGGGA  195
             ||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||
Sbjct  205  GATCCTAATCACTATTGCTCACGATATGAATTACGAGGAAGGCGAGATGCAGCTCTGGGA  264

Query  196  GACCGTTGGATCACCTTTTATTCCTCTGAGTGAATTCTCTGATGCTGCTGTGATGAAGAA  255
            ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||
Sbjct  265  GACCGTTGGATCACCTTTTATTCCTATGAGTGAATTCTCTGACGCTGCTGTGATGAAAAA  324

Query  256  GTATGCAGTGAAGCCAGATGCTGAAACTCTTGACATTGTCAACACTGCCGCTAGGAAGAA  315
            ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct  325  GTATGCATTGAAGCCAGATGCTGAAACCCTTGACATTGTCAATACTGCCGCTAGGAAGAA  384

Query  316  AACGGTTACAGTAGTGATGAAGATATATTGGGGAGATCCTCGTGAGAAGATTTGTGCAGC  375
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  385  AACGATTACAGTAGTGATGAAGATATATTGGGGAGATCCTCGTGAGAAGATTTGTGCAGC  444

Query  376  AGCTGAACAGATTCCTCTTTCAAGCCTTGTGATGGGTAACCGAGGCCTCGGTGGTCTTAA  435
            |||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||
Sbjct  445  AGCTGAACAGATTCCTCTCTCAAGCCTTGTGATGGGTAACAGAGGCCTTGGTGGTCTTAA  504

Query  436  GAGGATGATTATGGGAAGTGTAAGCAACCATGTGGTGAACAACGTTGTATGCCCTGTGAC  495
            ||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||
Sbjct  505  GAGGATGATTATGGGAAGTGTAAGCAACCATGTTGTCAACAACGTTGCATGCCCTGTGAC  564

Query  496  CGTTGTCAAGGCTCACACCTGAGTTTGCTCGGGGAACTCTAA  537
            ||||||||||||||||| |||||||||||||| |||||||||
Sbjct  565  CGTTGTCAAGGCTCACATCTGAGTTTGCTCGGAGAACTCTAA  606



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 25719883264


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5