BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg929555 Length=598 Score E Sequences producing significant alignments: (Bits) Value AT3G17130.1 | Symbols: | Plant invertase/pectin methylesterase... 850 0.0 > AT3G17130.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr3:5844495-5845046 REVERSE LENGTH=552 Length=552 Score = 850 bits (460), Expect = 0.0 Identities = 523/553 (95%), Gaps = 5/553 (1%) Strand=Plus/Plus Query 30 ATGAAGAGATCCTCCACAGTCACATCATTACCGTGTCTCTCCCTATTTCTCC-TCTTGCT 88 ||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| || |||| Sbjct 1 ATGAAAAGATCATCCACCGTCACATCATTACCGTGTCTCTCCCTCTTTCTCCTTC-TGCT 59 Query 89 ACTGCCGTCGGTAGTCCAATCCTCCGACGACCTTATCGACAAAATATGCCAAGCAACGCC 148 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 TCTGCCGTCGGTAGTCCAATCCTCCGACGACCTTATCGACAAAATATGCCAAGCAACGCC 119 Query 149 GTTCTGCGACCTCTGTGAAGCCTCTCTCCGTCCACTCTCTCCCTCACCTTCTGATCCAAA 208 ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||| || Sbjct 120 ATTCTGCGACCTATGTGAAGCCTCTCTTCGTCCATTCTCTCCGTCACCTTCTGATCCCAA 179 Query 209 ATCCTTAGCCGCCGCTATGGCCAGTGTCGTCCTCGGAAACATGACCGATACTTTAGGATA 268 |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 180 ATCCTTAGGTGCCGCTATGGCCAGCGTCGTGCTCGGAAACATGACCGATACTTTAGGATA 239 Query 269 CATTCAATCGCTGATCAAACATTCTCACGATCCTGCGGCAGAGCGCGCGCTGGCTCAGTG 328 ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 240 CATCCAATCGCTGATCAAACATGCTCACGATCCTGCGGCAGAGCGCGCGCTGGCTCAGTG 299 Query 329 CGCCGAGCTGTACCGGCCGGTGGTCAAGTTTAATATTCCTCAGGCGATGGAGGCAATGCA 388 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 CGCTGAGCTGTACCGGCCGGTGGTCAAGTTTAATATTCCTCAGGCGATGGAGGCAATGCA 359 Query 389 GGGCGGCAAATTTGGATTTGCGATATATGTACTCGGAGACGCCGAGAAGCAGACTGATTC 448 |||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 360 GGGCGGCAAATTCGGCTTTGCGATATATGTGCTCGGAGACGCCGAGAAGCAGACTGATTC 419 Query 449 TTGTCAGAAAGGGATCACGAACACCGGCGCCGACGATGAAAGCTCGGTGGCTGTTACGGC 508 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 420 TTGTCAGAAAGGAATCACGAACGCCGGCGCCGACGATGAAAGCTCGGTGGCTGTTACGGC 479 Query 509 TAGAAACAAGCTAGTTAAGAATCTTTGTGACGTGGCGATTTCTGTGCTTAAGTCTCTTAT 568 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 480 TAGAAACAAGCTAGTTAAAAATCTTTGTGACGTGGCGATTTCTGTGCTTAAGTCTCTGAT 539 Query 569 GA--G-TCTTTAA 578 || | ||||||| Sbjct 540 GAATGGTCTTTAA 552 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28784166231 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5