BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg929605 Length=948 Score E Sequences producing significant alignments: (Bits) Value AT3G17520.1 | Symbols: | Late embryogenesis abundant protein (... 1367 0.0 > AT3G17520.1 | Symbols: | Late embryogenesis abundant protein (LEA) family protein | chr3:5999289-6000370 REVERSE LENGTH=1082 Length=1082 Score = 1367 bits (740), Expect = 0.0 Identities = 867/929 (93%), Gaps = 5/929 (1%) Strand=Plus/Plus Query 14 AGTGTAATAAAAATGGGGGTAACAGAGAGAAGAGTGTACGGTTTGGTTATGGTATCTTTG 73 ||||||| |||||| ||||| | |||| ||| |||||||||||||||||||||||||||| Sbjct 1 AGTGTAACAAAAAT-GGGGTTAGAGAG-GAA-AGTGTACGGTTTGGTTATGGTATCTTTG 57 Query 74 GTACTTATGGCTATTGCAACGATGTGTTGTGTCCAAGCTACGATCGAGGAAGAAGCGGCT 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 GTACTTATGGCTATTGCAACGATGTGTTGTGTCCAAGCTACGATCGAGGAAGAAGCGGCT 117 Query 134 AAGGATGAATCATGGACTGATTGGGCCAAGGAGAAGATCGGTCTCAAGCACGAAGACAAC 193 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 118 AAGGATGAATCATGGACTGATTGGGCAAAGGAGAAGATCGGTCTCAAGCACGAAGACAAC 177 Query 194 ATCCAACCCACTCATACCACCACAACTGTCCAAGACGACGCTTGGAGAGCGAGTGAAAAA 253 |||||||||||||| |||||||| || || |||||||||||||||||||||||| ||||| Sbjct 178 ATCCAACCCACTCACACCACCACGACCGTTCAAGACGACGCTTGGAGAGCGAGTCAAAAA 237 Query 254 GCCGAGGACGCAAAAGAGGCGGTTAAACGCAAAGCAGAGGAAGCGGTTGGAGCCGCAAAG 313 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 238 GCCGAGGACGCAAAGGAGGCGGCTAAACGCAAAGCAGAGGAAGCGGTTGGAGCCGCGAAG 297 Query 314 GAGAAAGTGGGATCGGCTTACGAGACAGCTAAATCGAAAGCTG-GCGAGGGTTTGGGTTC 372 ||||||| ||| ||||| |||||||||||||||||||||| || | |||||||||| ||| Sbjct 298 GAGAAAGCGGGTTCGGCATACGAGACAGCTAAATCGAAAGTTGAG-GAGGGTTTGGCTTC 356 Query 373 CCTGAAAGACAAGGCCTCGCAGGGGTACGACTCAGCTGGTCAAGTTAAGGATGACGTGTC 432 | |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 357 TGTAAAAGACAAGGCCTCGCAGAGTTACGACTCAGCTGGTCAAGTTAAGGATGACGTGTC 416 Query 433 TCACAAGTCAAAGCAAGTTAAAGATAGCTTGTCCGGAGATGAAAACGATGAGTCCTGGAC 492 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| Sbjct 417 TCACAAGTCAAAGCAAGTTAAAGATAGCTTGTCGGGAGACGAAAACGATGAGTCTTGGAC 476 Query 493 TGATTGGGCCAAAGAGAAAATCGGAATCAAGAATGAAGACATCAATAGCCCTAACTTGGG 552 | |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 477 CGGTTGGGCCAAAGAGAAAATCGGAATCAAGAACGAAGACATCAACAGCCCTAACTTGGG 536 Query 553 AGAGACAGTGTCGGAGAAGGCTAAAGACGCTAAGGACGCTGCTAAACGCAAAGCAGGAGA 612 |||||| || || |||||||| ||||| |||||||| || |||||||||||||||||||| Sbjct 537 AGAGACGGTATCTGAGAAGGCAAAAGAAGCTAAGGAAGCGGCTAAACGCAAAGCAGGAGA 596 Query 613 TGCTAAGGAGAAGTTGGAGGAAACGGTTGAGGCCGCGAAAGAGAAGGCGAGCGATATGAC 672 |||||| |||||||||| ||| || |||||| | |||||||||||||||||||||||||| Sbjct 597 TGCTAAAGAGAAGTTGGCGGAGACAGTTGAGACGGCGAAAGAGAAGGCGAGCGATATGAC 656 Query 673 GAGTGCAGCTAAGGAGAAGGCGGAGACGGTGAAGAAGGAAGCagagagagagagTAAGAG 732 |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct 657 GAGTGCAGCTAAGGAGAAGGCGGAGAAGTTGAAGGAGGAAGCAGAGAGAGAGAGTAAGAG 716 Query 733 TGCGAAGGAGACAAGTAAGGAAAGCTACGAGACTGCGAAATCTAAAGCCGATGAGACTTT 792 ||||||||||| || ||| ||||| || |||||||| ||||| ||||||||||||||||| Sbjct 717 TGCGAAGGAGAAAATTAAAGAAAGTTATGAGACTGCAAAATCAAAAGCCGATGAGACTTT 776 Query 793 GGAGTCTGCAAAAGATAAGGCGGCGCAGAGTTACGACTCAGCTGCGCGTAAATCGGAGGA 852 ||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 777 AGAGTCCGCGAAAGATAAGGCGTCGCAGAGTTACGACTCAGCTGCGCGTAAATCGGAGGA 836 Query 853 AGCTAAAGATACCGTGTCTCACAAGTCAAAACGTGTTAAAGAGAGCTTGACCGACGATGA 912 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 837 AGCTAAAGATACCGTGTCTCACAAGTCAAAACGTGTTAAAGAGAGCTTGACCGACGATGA 896 Query 913 TGCTGAGCTCTAAGAAGTTGGGAGAAACT 941 ||||||||||| ||||||||||||||||| Sbjct 897 TGCTGAGCTCTGAGAAGTTGGGAGAAACT 925 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46366117681 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5