BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg929903 Length=1589 Score E Sequences producing significant alignments: (Bits) Value AT3G19930.1 | Symbols: STP4, ATSTP4 | sugar transporter 4 | chr... 2693 0.0 > AT3G19930.1 | Symbols: STP4, ATSTP4 | sugar transporter 4 | chr3:6934773-6937120 FORWARD LENGTH=2099 Length=2099 Score = 2693 bits (1458), Expect = 0.0 Identities = 1550/1594 (97%), Gaps = 7/1594 (0%) Strand=Plus/Plus Query 1 TTTGATTTTTT-GCAAATCGGAGAAATGGCCGGAGGATTCGTCAGTCAAACGCCGGGTGT 59 |||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 252 TTTG-TTTTTTAGCAAATCAAAGAAATGGCCGGAGGGTTCGTCAGTCAAACGCCGGGTGT 310 Query 60 TCGGAACTACAATTACAAACTGACACCGAAAGTGTTTGTAACATGTTTCATCGGTGCTTT 119 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 311 TCGGAACTACAATTACAAACTGACACCGAAAGTGTTTGTGACATGTTTCATCGGTGCTTT 370 Query 120 TGGTGGTCTCATCTTCGGATACGATCTCGGGATCTCAGGAGGGGTAACCTCAATGGAGCC 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 371 TGGTGGTCTCATCTTCGGATACGATCTCGGGATCTCAGGAGGGGTAACCTCAATGGAGCC 430 Query 180 ATTCTTGGAAGAGTTCTTCCCTGACGTCTACAAGAAGATGAAGAACGCACACGAGAACGA 239 |||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct 431 ATTCTTGGAAGAGTTCTTCCCTTACGTCTACAAGAAGATGAAGAGCGCACATGAGAACGA 490 Query 240 GTACTGTCGATTTGATAGTGAGCTTCTCACTCTCTTCACTTCGTCTCTCTATGTGGCGGC 299 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 491 GTACTGTCGATTTGATAGTCAGCTTCTCACTCTCTTCACTTCGTCTCTCTATGTGGCGGC 550 Query 300 TTTGATATCTTCTCTCTTTGCCTCCACCATTACTCGAGTTTTCGGAAGGAAATGGTCGAT 359 |||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 551 TTTGGTGTCTTCTCTCTTTGCCTCCACCATTACTAGAGTTTTCGGAAGGAAATGGTCGAT 610 Query 360 GTTCCTCGGTGGTTTCACCTTCTTTATCGGGTCTGCCTTCAACGGCTTTGCCCAAAACAT 419 ||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct 611 GTTTCTCGGTGGTTTCACCTTCTTCATCGGTTCTGCTTTCAACGGCTTTGCCCAAAACAT 670 Query 420 CGCTATGCTTCTCATTGGTCGTATTCTACTTGGTTTTGGAGTCGGATTCGCCAATCAATC 479 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 671 CGCTATGCTTCTCATTGGTCGTATCCTACTTGGTTTCGGAGTCGGATTCGCCAATCAATC 730 Query 480 TGTACCGGTTTATTTATCAGAAATGGCTCCTCCGAATCTAAGAGGAGCTTTTAACAACGG 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 731 TGTACCGGTTTATTTATCAGAAATGGCTCCTCCGAATCTAAGAGGAGCTTTCAACAACGG 790 Query 540 GTTTCAAGTAGCGATTATCTTTGGTATTGTTGTTGCAACGATCATCAATTACTTCACCGC 599 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 791 GTTTCAAGTAGCGATTATCTTTGGTATTGTGGTTGCAACGATCATCAATTACTTCACCGC 850 Query 600 ACAGATGAAAGGAAACATCGGATGGAGAATCTCTCTCGG-TCTAGCTTGTGTCCCTGCAG 658 ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 851 ACAGATGAAAGGAAACATCGGATGGAGAATCTCTCTCGGAT-TAGCTTGTGTCCCTGCAG 909 Query 659 TTATGATCATGATCGGAGCTCTGATCCTTCCCGACACTCCGAACTCTCTCATCGAACGTG 718 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 910 TGATGATCATGATCGGAGCTCTGATCCTTCCCGACACTCCCAACTCTCTCATCGAACGTG 969 Query 719 GCTACACCGAAGAGGCCAAGCAAATGCTTCAGTCCATCCGAGGAACCAATGAAGTCGATG 778 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 970 GCTACACCGAAGAGGCCAAGGAAATGCTTCAGTCCATCCGAGGAACCAATGAAGTCGATG 1029 Query 779 AAGAGTTTCAAGATCTCATTGATGCAAGTGAGGAGTCCAAGCAAGTGAAACACCCATGGA 838 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1030 AAGAGTTTCAAGATCTCATTGATGCAAGTGAGGAGTCCAAGCAAGTGAAACACCCATGGA 1089 Query 839 AGAACATCTTGCTTCCTCGTTACAGACCACAATTGATCATGACTTGCTTCATTCCTTTCT 898 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1090 AGAACATCATGCTTCCTCGTTACAGACCACAATTGATCATGACTTGCTTCATTCCTTTCT 1149 Query 899 TTCAACAACTTACCGGAATCAATGTCATTACCTTCTACGCCCCGGTTTTGTTCCAAACCC 958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1150 TTCAACAACTTACCGGAATCAATGTCATTACCTTCTACGCCCCGGTTTTGTTCCAAACCC 1209 Query 959 TCGGGTTCGGTAGCAAAGCTTCCCTCCTATCAGCTATGGTAACGGGTATCATCGAGCTCT 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1210 TCGGGTTCGGTAGCAAAGCTTCCCTCCTATCAGCTATGGTAACGGGTATCATCGAGCTCT 1269 Query 1019 TGTGTACCTTCGTCTCTGTTTTTACAGTGGATAGGTTTGGAAGAAGAGTCTTGTTCCTCC 1078 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1270 TGTGTACCTTCGTCTCTGTTTTTACAGTGGATAGGTTTGGAAGAAGAATCTTGTTCCTCC 1329 Query 1079 AAGGAGGTATCCAGATGCTTATCTCTCAGATCGCTATTGGAGCCATGATTGGGGTCAAAT 1138 |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 1330 AAGGAGGTATCCAGATGCTTGTCTCTCAGATCGCTATTGGAGCCATGATTGGAGTCAAAT 1389 Query 1139 TCGGAGTGGCTGGAACAGGAAACATAGGGAAATCAGATGCCAATCTAATCGTGGCACTGA 1198 | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1390 TTGGAGTGGCTGGAACAGGAAACATAGGGAAAAGTGATGCCAATCTAATCGTGGCACTGA 1449 Query 1199 TCTGCATCTATGTAGCGGGTTTCGCCTGGTCATGGGGACCTTTGGGATGGTTGGTTCCTA 1258 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1450 TCTGCATCTATGTAGCGGGTTTCGCCTGGTCATGGGGACCGTTGGGATGGTTGGTTCCTA 1509 Query 1259 GTGAGATATCTCCACTAGAGATCCGATCAGCAGCTCAAGCCATAAACGTTTCGGTCAACA 1318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1510 GTGAGATATCTCCACTAGAGATCCGATCAGCAGCTCAAGCCATAAACGTTTCGGTCAACA 1569 Query 1319 TGTTCTTCACATTCCTTGTGGCTCAGCTCTTCCTCACTATGCTTTGTCACATGAAATTCG 1378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1570 TGTTCTTCACATTCCTTGTGGCTCAGCTCTTCCTCACTATGCTTTGTCACATGAAATTCG 1629 Query 1379 GACTATTCTTCTTCTTCGCCTTCTTTGTGGTCATAATGACGGTATTCATCTACATGATGT 1438 |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct 1630 GACTATTCTTCTTCTTCGCCTTCTTTGTTGTCATAATGACAATATTCATCTACTTGATGT 1689 Query 1439 TGCCTGAGACAAAGAATGTGCCAATCGAAGAGATGAACAGAGTGTGGAAGGCACATTGGT 1498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1690 TGCCTGAGACAAAGAATGTGCCAATCGAAGAGATGAACAGAGTGTGGAAGGCACATTGGT 1749 Query 1499 TCTGGGGAAAGTTTATTCCTGATGAAGCTGTTAACATGGGTGCTGCTGAGATGCAACAGA 1558 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 1750 TCTGGGGAAAGTTTATTCCTGATGAAGCTGTCAATATGGGTGCTGCTGAGATGCAACAGA 1809 Query 1559 AGTCCGTATGATGAT---CAAGAATGAAGTTTTC 1589 ||||||||||||||| |||||||||||||||| Sbjct 1810 AGTCCGTATGATGATGATCAAGAATGAAGTTTTC 1843 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78463451835 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5