BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg930737 Length=2368 Score E Sequences producing significant alignments: (Bits) Value AT2G04160.1 | Symbols: AIR3 | Subtilisin-like serine endopeptid... 3609 0.0 > AT2G04160.1 | Symbols: AIR3 | Subtilisin-like serine endopeptidase family protein | chr2:1401268-1407745 REVERSE LENGTH=2552 Length=2552 Score = 3609 bits (1954), Expect = 0.0 Identities = 2237/2374 (94%), Gaps = 17/2374 (1%) Strand=Plus/Plus Query 3 aagaagaaga-agaag-agaagaagaaTGAAGCTTACACATACCTTCTCGTTTCTTTTCT 60 |||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||| ||| Sbjct 26 AAGAAGAAGAGAGAAGAAGAAGAAGAATGAAGCTAACACATAACTTCTCGTTTC--TTC- 82 Query 61 TTCTTCTCCTTCTTGTCCACACGAGCTCGAAACCCACTCTTGCTTCTAAAGATTCGTCTT 120 ||||||| |||||||| |||| ||||||||||| || ||||||||||||||||||||||| Sbjct 83 TTCTTCTTCTTCTTGTTCACATGAGCTCGAAACACATTCTTGCTTCTAAAGATTCGTCTT 142 Query 121 CATATGTGGTGTACTTTGGAGCTCACTCTCATGTCGGAGAGATAACTGAAGAAGCCATGG 180 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 143 CATATGTGGTGTACTTCGGAGCTCACTCTCATGTCGGAGAGATAACAGAAGATGCCATGG 202 Query 181 ATCGCGTCAAAGAAACCCACTACGACTTTCTTGGTAT-CTTCATTGGAAGCCGTGAGATT 239 |||| ||||||||||| |||||||||||||||||| | ||||| |||||||||||||| Sbjct 203 ATCGAGTCAAAGAAACTCACTACGACTTTCTTGGT-TCCTTCACTGGAAGCCGTGAGAGA 261 Query 240 GCCACAGACGCCATTTTCTACTCATACACAAAGCACATCAACGGATTCGCTGCTCATCTG 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 262 GCCACAGACGCCATTTTCTACTCATACACAAAGCACATCAACGGATTCGCTGCTCATCTA 321 Query 300 GACCACGACCTCGCATATGCAATCTCCAAACACCCTGAAGTTGTGTCTGTATTCCCAAAC 359 ||||||||||| || |||| |||||||||||||||||||||||||||||| ||||||||| Sbjct 322 GACCACGACCTTGCTTATGAAATCTCCAAACACCCTGAAGTTGTGTCTGTCTTCCCAAAC 381 Query 360 AAAGCCTTGAAGCTTCACACGACTCGATCATGGGACTTCTTGGGTTTGGAACATAACTCT 419 ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 382 AAAGCTTTAAAGCTTCACACGACTCGATCATGGGACTTTTTGGGTTTGGAACATAACTCT 441 Query 420 TACGTTCCTTCCTCTTCCATTTGGAGAAAGGCTAGATTCGGAGAAGATACCATTATCGCA 479 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 442 TACGTTCCTTCCTCTTCCATTTGGAGAAAGGCTAGGTTCGGAGAAGATACCATTATTGCA 501 Query 480 AATCTCGATACGGGTGTGTGGCCAGAATCAAAGAGCTTTAGAGATGAAGGCTTGGGACCA 539 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 502 AATCTCGATACAGGTGTGTGGCCAGAATCAAAGAGCTTTAGAGATGAAGGCTTGGGACCA 561 Query 540 ATTCCTTCAAGATGGAAGGGAATATGTCAAAACCAAAAAGATGCCACTTTCCATTGCAAT 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 562 ATTCCTTCAAGATGGAAGGGAATATGTCAAAACCAAAAAGATGCCACTTTCCATTGCAAT 621 Query 600 AGGAAACTGATCGGAGCAAGGTACTTTC-ACAAGGGCTACGCAGCCGCCGTAGGACCTCT 658 ||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| ||| Sbjct 622 AGGAAACTGATAGGAGCAAGGTAC-TTCAACAAGGGCTACGCAGCCGCCGTAGGACATCT 680 Query 659 AAACTCAACCTTCGAGTCTCCACGTGATCTCGACGGCCATGGCTCCCACACTCTCTCCAC 718 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 681 CAACTCAAGCTTCGACTCTCCACGTGATCTCGACGGCCATGGCTCCCACACTCTCTCCAC 740 Query 719 CGCCGCCGGAGATTTCGTCCCTGGAGTTAGCATCTTCGGCCAAGGCAACGGCACGGCAAA 778 ||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| || Sbjct 741 CGCCGCCGGAGATTTTGTTCCTGGAGTCAGCATCTTCGGCCAAGGCAACGGCACGGCCAA 800 Query 779 AGGTGGCTCTCCTCGGGCCAGAGTAGCCGCATACAAAGTCTGTTGGCCACCAGTCAAAGG 838 ||||||||| ||||| |||||||| ||||| ||||||||||| ||||| ||||||||||| Sbjct 801 AGGTGGCTCCCCTCGCGCCAGAGTGGCCGCGTACAAAGTCTGCTGGCCGCCAGTCAAAGG 860 Query 839 CAATGAGTGCTACGACGCCGACGTCCTCGCCGCTTTTGATGCTGCCATACACGACGGAGC 898 ||| || ||||||||||| ||||||||||| ||||| || |||||||||||||||||||| Sbjct 861 CAACGAATGCTACGACGCAGACGTCCTCGCTGCTTTCGACGCTGCCATACACGACGGAGC 920 Query 899 TGACGTCATATCTGTCTCTCTAGGCGGCGAGCCTACCTCGTTTTTTAACGATAGTGTCGC 958 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 921 TGACGTCATATCCGTCTCTCTAGGCGGCGAGCCTACCTCGTTTTTTAACGACAGTGTCGC 980 Query 959 TATTGGTTCGTTTCACGCCGCTAAGAAGCGGATCGTGGTTGTTTGCTCCGCCGGAAACTC 1018 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 981 TATTGGTTCCTTTCACGCCGCTAAGAAGCGGATCGTGGTTGTTTGCTCTGCCGGAAACTC 1040 Query 1019 TGGACCGGCGGATAGTACGGTTTCCAACGTCGCGCCGTGGCTGATCACCGTCGGAGCTAG 1078 ||||||||| |||||||||||||| || |||||||| |||| ||| ||||| || ||||| Sbjct 1041 TGGACCGGCAGATAGTACGGTTTCTAATGTCGCGCCATGGCAGATTACCGTTGGTGCTAG 1100 Query 1079 CACTATGGACCGTGAGTTTGCTAGCAACCTTGTTCTCGGTAATGGAAAACATTACAAGGG 1138 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1101 CACCATGGACCGTGAGTTTGCTAGCAATCTTGTTCTCGGTAATGGAAAACATTACAAGGG 1160 Query 1139 ACAAAGCTTGTCATCCACAGCATTGCCACATGCTAAGTTCTATCCAATTATGGCATCTGT 1198 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1161 ACAAAGCTTGTCATCCACGGCATTGCCACATGCTAAGTTCTATCCAATTATGGCATCTGT 1220 Query 1199 AAATGCAAAAGCTAAGAACGCTTCAGCTTTGGATGCACAATTGTGCAAACTTGGATCGCT 1258 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1221 AAATGCAAAAGCTAAGAACGCTTCAGCTTTGGATGCACAATTATGCAAACTTGGATCGCT 1280 Query 1259 TGACCCTATAAAGGCAAAGGGGAAGATATTAGTGTGTCTCAGAGGACAGAACCCGAGGGT 1318 ||||||||||||| ||||||| ||||||||||||||||||||||| |||||| |||||| Sbjct 1281 TGACCCTATAAAGACAAAGGGAAAGATATTAGTGTGTCTCAGAGGGCAGAACGGGAGGGT 1340 Query 1319 GGAAAAGGGTCGGGTGGTGGCTTTAGCTGGTGGCGTAGGGATGGTTCTTGAGAACAC-TA 1377 |||||||||||||| |||||||||| |||||| |||||||||||||||||||||| || Sbjct 1341 GGAAAAGGGTCGGGCCGTGGCTTTAGGGGGTGGCATAGGGATGGTTCTTGAGAACACTTA 1400 Query 1378 TTGTCACCGGGAATGATCTAAC-CGCTGATCCGCATGTCCTCCCAGCTACACAGCTCACT 1436 |||||||||||||||| | || |||||| ||||||||||| ||||| |||||||||||| Sbjct 1401 -TGTCACCGGGAATGAT-TTACTCGCTGACCCGCATGTCCTTCCAGCCACACAGCTCACT 1458 Query 1437 TCTAAGGATGGTTTTGCTGTGTCAAGATATATCAGCCAAACCAAGAAGCCGATTGCGCAC 1496 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1459 TCTAAGGATAGTTTTGCTGTGTCAAGATATATCAGCCAAACCAAGAAGCCGATTGCACAC 1518 Query 1497 ATTACTCCTTCTAGGACAGATTTAGGATTAAAACCAGCGCCTGTAATGGCTTCATTTTCT 1556 ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 1519 ATTACTCCTTCAAGGACAGATTTGGGACTAAAACCAGCGCCTGTAATGGCTTCATTTTCT 1578 Query 1557 TCTAAGGGTCCAAGCACAGTGGCTCCTCAGATTCTGAAGCCTGACATAACTGCTCCTGGT 1616 || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1579 TCAAAAGGTCCAAGCATAGTGGCTCCTCAGATTCTGAAGCCTGACATAACTGCTCCTGGT 1638 Query 1617 GTGAGTGTGATCGCTGCCTACACTGCCGCAGTATCTCCAACAGAAC-AACAGTTTGATCC 1675 ||||||||||||||||||||||||| ||||| ||||||||| ||| ||||||||||||| Sbjct 1639 GTGAGTGTGATCGCTGCCTACACTGGAGCAGTCTCTCCAACA-AACGAACAGTTTGATCC 1697 Query 1676 TCGACGACTTCTGTTCAATGCTATTTCAGGAACCTCCATGTCTTGTCCTCATATCTCGGG 1735 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 1698 TCGACGACTTCTGTTCAATGCTATTTCAGGAACCTCTATGTCTTGTCCTCATATCTCTGG 1757 Query 1736 CGTTGCGGGTCTTCTCAAAACCCGTTATCCTTCCTGGAGCCCCGCAGCTATCCGCTCTGC 1795 | ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1758 CATTGCGGGTCTTCTCAAAACTCGTTATCCTTCTTGGAGCCCCGCAGCTATCCGCTCTGC 1817 Query 1796 CATCATGACTACCGCAACAACAATGGATGACATTCCTGGACCTATTCAAAATGCAACCAG 1855 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 1818 CATCATGACTACCGCAACAATAATGGATGACATTCCTGGACCTATCCAAAATGCAACCAA 1877 Query 1856 CATGAAGGCAACGCCTTTCAGTTTCGGGGCAGGACACGTCCAACCAAATCTAGCTGTGAA 1915 |||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 1878 CATGAAGGCAACACCTTTCAGTTTTGGGGCAGGACACGTCCAACCAAATTTAGCTGTGAA 1937 Query 1916 TCCCGGTCTCATATACGATTTAGGCGTCAAGGATTACCTCAACTTCTTATGCTCACTTAG 1975 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1938 TCCCGGTCTCGTATACGATTTAGGCATCAAGGATTACCTCAACTTCTTATGCTCACTTGG 1997 Query 1976 ATACAATGCATCACAAATCTCTGTCTTCTCGGGAAATAACTTTACTTGTTCAAGCCCCAA 2035 |||||||||||||||||||||||| |||||||| || |||||||||||||||||||| || Sbjct 1998 ATACAATGCATCACAAATCTCTGTATTCTCGGGCAACAACTTTACTTGTTCAAGCCCTAA 2057 Query 2036 AACCAGTCTTGTTAACCTCAACTATCCTTCCATCACAGTTCCAAACTTAACATCAAGCAA 2095 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2058 AATCAGTCTTGTTAACCTCAACTATCCTTCCATCACAGTTCCAAACTTAACATCAAGCAA 2117 Query 2096 AGTCACCGTCTCAAGGACCGTTAAAAACGTTGGACGACCTTCGACT-TATACTGTCCGGG 2154 ||||||||| |||||||| ||||||||||||||||||||||||| | ||||| ||| || Sbjct 2118 AGTCACCGTTTCAAGGACTGTTAAAAACGTTGGACGACCTTCGA-TGTATACCGTCAAGG 2176 Query 2155 TGGCTAACCCACAAGGTGTTTATGTCGCGGTTAAGCCAACGAGCTTGAATTTTACCAAAG 2214 || ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 2177 TGAATAACCCACAGGGTGTTTATGTCGCGGTGAAGCCAACGAGCTTGAATTTCACCAAAG 2236 Query 2215 TTGGAGAGCAAAAGACGTTTAAAGTGATCCTTGTGAAAAGTAAGGGAAATGTGGCTAAGG 2274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2237 TTGGAGAGCAAAAGACGTTTAAAGTGATCCTTGTGAAAAGTAAGGGAAATGTGGCTAAGG 2296 Query 2275 GCTATGTGTTTGGAGAATTGGTTTGGTCAGACAAGAAGCATCGTGTGAGAAGTCCCATTG 2334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2297 GCTATGTGTTTGGAGAATTGGTTTGGTCAGACAAGAAGCATCGTGTGAGAAGTCCCATTG 2356 Query 2335 TGGTGAAGCTCTAAATTTGATTTTTAGTGCCAAT 2368 |||||||||||||| ||||| ||| ||||||||| Sbjct 2357 TGGTGAAGCTCTAACTTTGAATTTGAGTGCCAAT 2390 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 117569676390 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5