BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg930789

Length=226
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G04700.1 | Symbols:  | ferredoxin thioredoxin reductase cata...   200    4e-51


> AT2G04700.1 | Symbols:  | ferredoxin thioredoxin reductase catalytic 
beta chain family protein | chr2:1646807-1648560 FORWARD 
LENGTH=810
Length=810

 Score =  200 bits (108),  Expect = 4e-51
 Identities = 112/114 (98%), Gaps = 0/114 (0%)
 Strand=Plus/Minus

Query  113  TTTCGTGTAAAGTTGGATCCTTTTATATAGCTTGTAATCGTTTTGCAAACAAAAGATCAT  172
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  810  TTTCGTGTAAAGTTGGATCCTTTTATATAGCTTGTAATCGTTTTGCAAACAAAAGATCAT  751

Query  173  ACTAAAGTATATTTTCTTAAGAGTGAAAGAGTTGTACAGAAGAACGAAGAAGAT  226
            ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct  750  ACTAAAGAATATTATCTTAAGAGTGAAAGAGTTGTACAGAAGAACGAAGAAGAT  697



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 10154085298


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5