BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932039 Length=1186 Score E Sequences producing significant alignments: (Bits) Value AT2G21170.1 | Symbols: TIM, PDTPI | triosephosphate isomerase |... 2030 0.0 > AT2G21170.1 | Symbols: TIM, PDTPI | triosephosphate isomerase | chr2:9070754-9073233 REVERSE LENGTH=1368 Length=1368 Score = 2030 bits (1099), Expect = 0.0 Identities = 1160/1189 (98%), Gaps = 6/1189 (1%) Strand=Plus/Plus Query 1 ACCACCAACCCTCCTCATCGCCTCTATCTCCTCTGCTACCTTAAGCTGAGAGAGTCACAG 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10 ACCACCAACCCT-CTCATCGCCTCTATCTCCTCTGCTACCTTAAGCTGAGAGAGTCACAG 68 Query 61 TCTCGTCTCTATCTCTCCTCTTTGCCtttttttCCACTCACTACACGCCAAACCCGACGA 120 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 69 TCTCGTCTCTATCTCTCCTCTTTGCC--TTTTTCCACTCACTACACGCCAAACCCGACGA 126 Query 121 CATGGCAGCGACCTCTCTCACTGCCCCTCCTCCTTTCTCCGGTCTCCGCCGCATTTCTCC 180 ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 127 CATGGCAGCTACCTCTCTCACTGCCCCTCCTTCTTTCTCCGGTCTCCGCCGCATTTCTCC 186 Query 181 CAAGCTCGA--C-GCCGCCGTCTCCTCCCACCAATCCTTCTTCCACCGCGTCAATTCCTC 237 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 187 CAAGCTCGACGCTGCCGCCGTCTCCTCCCACCAATCCTTCTTCCACCGCGTCAATTCCTC 246 Query 238 TACCCGTCTCGTTTCTTCCTCTTCTTCTTCTCATCGCTCTCCCAGAGGCGTTGTTGCCAT 297 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 247 TACCCGTCTCGTTTCTTCCTCTTCTTCTTCTCATCGCTCCCCCAGAGGTGTTGTTGCCAT 306 Query 298 GGCTGGATCCGGAAAGTTTTTCGTTGGAGGAAACTGGAAATGTAACGGGACTAAGGACTC 357 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 307 GGCTGGATCCGGAAAGTTTTTCGTTGGAGGAAACTGGAAGTGTAACGGGACTAAGGACTC 366 Query 358 CATCGCCAAGCTTGTCTCTGATCTCAACAGTGCAACCTTGGAAGCAGATGTAGATGTTGT 417 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 367 CATCGCCAAGCTTATCTCCGATCTCAACAGTGCAACCTTGGAAGCAGATGTAGATGTTGT 426 Query 418 TGTGTCACCTCCATTTGTCTACATCGACCAGGTCAAATCCTCGTTGACAGACCGTATTGA 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 427 TGTGTCACCTCCATTTGTCTACATCGACCAGGTCAAATCCTCGTTGACAGACCGTATTGA 486 Query 478 CATATCAGGTCAGAACTCTTGGGTTGGAAAAGGTGGAGCCTTCACTGGTGAAATCAGCGT 537 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 487 CATATCAGGTCAGAACTCTTGGGTTGGGAAAGGTGGAGCCTTCACTGGTGAAATCAGCGT 546 Query 538 GGAACAGCTCAAAGACCTTGGCTGCAAGTGGGTCATTCTTGGGCATTCCGAACGGAGACA 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 547 GGAACAGCTCAAAGACCTTGGCTGCAAGTGGGTCATTCTTGGGCATTCCGAACGGAGACA 606 Query 598 TGTCATCGGAGAAAAAGATGAGTTTATCGGGAAGAAAGCTGCTTACGCATTGAGTGAGGG 657 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 607 TGTCATCGGAGAAAAAGATGAGTTTATCGGGAAGAAAGCTGCATATGCATTGAGTGAGGG 666 Query 658 TCTTGGAGTGATAGCTTGTATTGGGGAAAAGCTAGAAGAGAGGGAAGCAGGCAGGACATT 717 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 667 TCTTGGAGTGATAGCTTGTATTGGGGAAAAGCTAGAAGAGAGGGAAGCAGGCAAGACGTT 726 Query 718 TGATGTTTGCTTCGCGCAACTGAAGGCGTTTGCTGTTGCTGTGCCTAGCTGGGAAAATAT 777 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct 727 TGATGTTTGCTTCGCGCAACTGAAGGCGTTTGCTGATGCTGTGCCTAGCTGGGACAATAT 786 Query 778 AGTTGTTGCATACGAGCCTGTTTGGGCAATTGGAACTGGTAAAGTTGCATCTCCTCAGCA 837 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 787 AGTTGTTGCATACGAGCCTGTATGGGCAATTGGAACTGGTAAAGTTGCATCTCCTCAGCA 846 Query 838 AGCACAAGAAGTCCATGTAGCTGTCCGTGGTTGGCTAAAAAAGAATGTCTCTGAGGAAGT 897 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 847 AGCACAAGAAGTCCATGTAGCTGTCCGCGGTTGGCTAAAGAAGAATGTCTCTGAGGAAGT 906 Query 898 CGCTTCCAAAACAAGAATCATATATGGAGGTTCTGTCAATGGAGGCAACAGTGCAGAGCT 957 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 907 TGCTTCCAAAACGAGAATCATATATGGAGGTTCTGTCAATGGAGGCAACAGTGCAGAGCT 966 Query 958 TGCCAAAGAAGAAGACATTGATGGATTTCTTGTTGGCGGTGCCTCCTTGAAGGGTCCTGA 1017 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 967 TGCCAAAGAAGAAGACATTGATGGATTTCTTGTTGGTGGTGCCTCCTTGAAGGGTCCTGA 1026 Query 1018 GTTTGCAACCATTGTGAACTCAGTCACGTCGAAGAAAGTTGCTGCTTGATTGAGAACTAT 1077 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1027 GTTTGCAACCATTGTGAACTCAGTCACGTCGAAGAAAGTTGCTGCTTGATTGAGAACTAT 1086 Query 1078 CAGTAACGGAAATCGCTAGTCTCCATGGAACAGATGAGATCAGAAATAAAAGGGAGGTTA 1137 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1087 CAGTAACGGAAATCGCTAGTCTCCATGGAACAGATGAGATGAGAAATAAAAGGGAGGTTA 1146 Query 1138 GCGACCttgttgttgttgttgtgttCTTACTTCTTCTTCGTGAACTAAT 1186 |||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 1147 GCGACCTTGTTGTTGTTGTTGTGTTCTTACATCTTCTTCTTGAACTAAT 1195 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58232632200 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5