BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg932186
Length=1574
Score E
Sequences producing significant alignments: (Bits) Value
AT2G22240.1 | Symbols: ATMIPS2, MIPS2, ATIPS2 | myo-inositol-1-... 2579 0.0
AT4G39800.1 | Symbols: MI-1-P SYNTHASE, MIPS1, ATMIPS1, ATIPS1 ... 1687 0.0
> AT2G22240.1 | Symbols: ATMIPS2, MIPS2, ATIPS2 | myo-inositol-1-phosphate
synthase 2 | chr2:9451605-9454094 REVERSE LENGTH=1985
Length=1985
Score = 2579 bits (1396), Expect = 0.0
Identities = 1505/1559 (97%), Gaps = 2/1559 (0%)
Strand=Plus/Plus
Query 17 AGAAAATGTTCATCGAGAGCTTTAAAGTAGAGAGCCCAAATGTCAAATACACAGAGAATG 76
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 152 AGAAAATGTTCATCGAGAGCTTCAAAGTAGAGAGTCCAAATGTCAAATACACAGAGAATG 211
Query 77 AGATTC-ATTCGGTGTACGATTACGAAACAACAGAGGTCGTCCATGAGAATCGTAACGGT 135
||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 212 AGA-TCAATTCGGTGTACGATTACGAAACAACAGAGGTCGTCCACGAGAATCGTAACGGT 270
Query 136 ACATATCAATGGATTGTGAAGCCAAAGTCTGTCAAATACGATTTCAAAACAGACACTCGT 195
|||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 271 ACATATCAATGGGTCGTGAAGCCAAAGACTGTCAAATACGATTTCAAAACAGACACTCGT 330
Query 196 GTCCCCAAATTAGGGGTTATGCTTGTTGGTTGGGGAGGAAACAATGGATCAACACTAACC 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 331 GTCCCCAAATTAGGGGTTATGCTTGTTGGTTGGGGAGGAAACAATGGATCAACACTAACC 390
Query 256 GCTGGTGTCATTGCTAACAAAGAAGGAATCTCGTGGGCGACTAAAGACAAAGTGCAACAA 315
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 391 GCTGGTGTCATTGCTAACAAAGAAGGAATATCGTGGGCGACTAAAGACAAAGTGCAACAA 450
Query 316 GCTAATTACTTTGGTTCACTTACTCAAGCTTCTTCGATTCGTGTTGGTTCTTACAATGGT 375
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 451 GCTAATTACTTTGGTTCACTTACTCAAGCTTCATCGATTCGTGTTGGCTCTTACAATGGT 510
Query 376 GAAGAGATTTACGCTCCTTTCAAGAGTCTTCTTCCAATGGTGAATCCTGATGATGTTGTG 435
|||||||| || ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 511 GAAGAGATCTATGCTCCTTTCAAGAGTCTTCTTCCAATGGTGAATCCAGAGGATGTTGTG 570
Query 436 TTTGGTGGTTGGGATATAAGTGACATGAACTTAGCTGATGCTATGGCTAGAGCTAGAGTT 495
||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct 571 TTTGGTGGTTGGGATATAAGTGACATGAATTTAGCAGACGCTATGGCTAGAGCTAGAGTT 630
Query 496 CTTGACATTGATTTGCAGAAACAACTTAGACCTTACATGGAGACCATGATCCCACTTCCT 555
||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 631 CTTGATATTGATCTGCAGAAACAACTTAGACCTTACATGGAGAACATGATCCCACTTCCT 690
Query 556 GGAATCTATGACCCTGATTTCATTGCTGCGAATCAAGGGTCACGTGCTAATAGCGTGATC 615
|| |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||
Sbjct 691 GGTATCTATGACCCTGATTTCATCGCTGCTAATCAAGGTTCACGTGCTAATAGCGTGATC 750
Query 616 AAAGGTACCAAGAAGGAACAAGTTGATCACATCATCAAGGACATGAGGGAGTTTAAGGAG 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 AAAGGTACCAAGAAGGAACAAGTTGATCACATCATCAAGGACATGAGGGAGTTTAAGGAG 810
Query 676 AAGAACAAAGTGGATAAGTTGGTTGTGTTATGGACTGCAAACACAGAGCGTTATAGCAAT 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 AAGAACAAAGTGGATAAGTTGGTTGTGTTATGGACTGCAAACACAGAGCGTTATAGCAAT 870
Query 736 GTGATTGTAGGGCTTAATGATACAATGGAGAATCTATTGGCTTCTGTTGAAAAGGACGAG 795
||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||||||
Sbjct 871 GTGATTGTAGGACTTAACGATACGACGGAGAATCTATTGGCTTCTGTTGAAAAGGACGAG 930
Query 796 TCTGAGATCTCGCCGTCTACTTTGTATGCTATTGCTTGTGTTCTTGAAGGTATCCCTTTC 855
|||||||||||||||||||| |||||||| |||||||||||||||||||| || ||||||
Sbjct 931 TCTGAGATCTCGCCGTCTACGTTGTATGCGATTGCTTGTGTTCTTGAAGGCATTCCTTTC 990
Query 856 ATCAATGGGAGTCCTCAGAATACTTTTGTCCCCGGTCTTATCGAGTTGGCTATATCGAAG 915
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 991 ATCAATGGGAGTCCTCAGAATACTTTTGTCCCCGGTCTTATCGAATTGGCTATATCGAAG 1050
Query 916 AATTGTTTGATTGGTGGAGATGATTTCAAGAGTGGTCAGACTAAGATGAAATCCGTTTTG 975
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1051 AATTGTTTGATTGGTGGGGATGATTTCAAGAGTGGTCAGACTAAGATGAAATCCGTTTTG 1110
Query 976 GTCGATTTCCTTGTTGGAGCTGGCATCAAGCCTACTTCGATTGTGAGCTATAATCATTTG 1035
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1111 GTTGATTTCCTTGTTGGAGCTGGCATTAAGCCTACTTCGATTGTGAGCTATAATCATTTG 1170
Query 1036 GGAAATAACGACGGGATGAACCTCTCAGCGCCGCAGACTTTCCGCTCTAAGGAGATTTCA 1095
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1171 GGAAACAACGACGGGATGAACCTCTCAGCGCCACAGACTTTCCGCTCTAAGGAGATTTCA 1230
Query 1096 AAGAGCAATGTTGTAGACGACATGGTAGCTAGTAATGGCATCCTCTTTGAGCCCGGTGAA 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1231 AAGAGCAATGTTGTAGACGACATGGTAGCTAGTAATGGCATCCTCTTTGAGCCTGGTGAA 1290
Query 1156 CACCCTGACCATGTCGTTGTCATCAAGTATGTACCATATGTTGCGGATAGTAAAAGAGCA 1215
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1291 CACCCTGACCATGTCGTTGTCATCAAGTATGTGCCATATGTTGCGGATAGTAAAAGAGCA 1350
Query 1216 ATGGACGAGTACACGTCTGAGATATTCATGGGAGGGAGGAACACAATTGTGATGCATAAC 1275
||||| |||||||||||||||||||||||||||||||||||||| || ||| ||||||||
Sbjct 1351 ATGGATGAGTACACGTCTGAGATATTCATGGGAGGGAGGAACACTATAGTGTTGCATAAC 1410
Query 1276 ACTTGTGAGGACTCACTCTTGGCTGCTCCAATTATCTTGGATCTTGTTCTTCTCGCTGAA 1335
|||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1411 ACTTGTGAGGACTCTCTCTTGGCTGCACCAATTATCTTGGATCTTGTCCTTCTCGCTGAA 1470
Query 1336 CTCAGCACCAGGATCCAATTCAAAGCCGAAGGAGAGGGGAAGTTTCACTCTTTCCACCCG 1395
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1471 CTCAGCACCAGAATCCAATTTAAAGCTGAAGGAGAGGGGAAGTTTCACTCTTTCCACCCG 1530
Query 1396 GTAGCTACCATACTCAGTTACCTCACAAAGGCACCTCTTGTACCGCCTGGAACACCGGTG 1455
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1531 GTAGCTACCATACTCAGTTACCTCACAAAGGCACCTCTTGTACCGCCCGGAACACCGGTG 1590
Query 1456 GTTAACGCTCTGTCGAAGCAGCGGGCAATGCTGGAAAACATTCTTAGGGCCTGCGTTGGG 1515
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1591 GTTAACGCTCTGTCGAAGCAGCGGGCAATGCTGGAAAACATTCTTAGGGCATGTGTTGGG 1650
Query 1516 CTTGCGCCAGAGAACAACATGATCATGGAGTACAAGTGAAGGATGAGGAAGAAGAAGTA 1574
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1651 CTTGCGCCAGAGAACAACATGATCATGGAGTACAAGTGAAGGATGAGGAAGAAGAAGTA 1709
> AT4G39800.1 | Symbols: MI-1-P SYNTHASE, MIPS1, ATMIPS1, ATIPS1
| myo-inositol-1-phosphate synthase 1 | chr4:18469348-18471967
REVERSE LENGTH=1921
Length=1921
Score = 1687 bits (913), Expect = 0.0
Identities = 1350/1562 (86%), Gaps = 26/1562 (2%)
Strand=Plus/Plus
Query 19 AAAATGTTCATCGAGAGCTTTAAAGTAGAGAGCCCAAATGTCAAATACACAGAGAATGAG 78
|||||||| || |||||||| ||||| |||||||| || || || |||||||||||||||
Sbjct 72 AAAATGTTTATTGAGAGCTTCAAAGTTGAGAGCCCGAACGTGAAGTACACAGAGAATGAG 131
Query 79 ATTCATTCGGTGTACGATTACGAAACAACAGAGGTCGTCCATGAG-A-ATCGT-AACGGT 135
||||| || |||||||||||||| || || ||||| || |||||| | | ||| || ||
Sbjct 132 ATTCACTCTGTGTACGATTACGAGACGACGGAGGTTGTTCATGAGAAGACCGTCAATGGC 191
Query 136 ACATATCAATGGATTGTGAAGCCAAAGTCTGTCAAATACGATTTCAAAACAGACACTCGT 195
|| || ||||||||||||||||||||| |||||||||||||||||||||| || | ||||
Sbjct 192 ACTTACCAATGGATTGTGAAGCCAAAGACTGTCAAATACGATTTCAAAACCGATATTCGT 251
Query 196 GTCCCCAAATTAGGGGTTATGCTTGTTGGTTGGGGAGGAAACAATGGATCAACACTAACC 255
|||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||
Sbjct 252 GTCCCCAAATTAGGGGTTATGCTTGTGGGTTTGGGAGGAAACAATGGATCAACTCTCACC 311
Query 256 GCTGGTGTCATTGCTAACAAAGAAGGAATCTCGTGGGCGACTAAAGACAAAGTGCAACAA 315
|||||||| ||||| ||||||||||||||||||||||| || || |||||||||||||||
Sbjct 312 GCTGGTGTGATTGCGAACAAAGAAGGAATCTCGTGGGCAACGAAGGACAAAGTGCAACAA 371
Query 316 GCTAATTACTTTGGTTCACTTACTCAAGCTTCTTCGATTCGTGTTGGTTCTTACAATGGT 375
|| |||||||| || ||||| ||||||||||| ||||||||||| || |||| || |||
Sbjct 372 GCGAATTACTTCGGGTCACTAACTCAAGCTTCATCGATTCGTGTCGGATCTTTTAACGGT 431
Query 376 GAAGAGATTTACGCTCCTTTCAAGAGTCTTCTTCCAATGGTGAATCCTGATGATGTTGTG 435
|||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 432 GAAGAGATCTATGCTCCTTTCAAGAGTCTCCTTCCAATGGTGAATCCGGATGATGTTGTG 491
Query 436 TTTGGTGGTTGGGATATAAGTGACATGAACTTAGCTGATGCTATGGCTAGAGCTAGAGTT 495
||||| || |||||||||||||||||||||||||| ||||| ||||||||||| || |||
Sbjct 492 TTTGGAGGATGGGATATAAGTGACATGAACTTAGCAGATGCCATGGCTAGAGCCAGGGTT 551
Query 496 CTTGACATTGATTTGCAGAAACAACTTAGACCTTACATGGAGACCA-TGATCCCACTTCC 554
||||| || || ||||||||||| || || ||||||||||||| || || | ||||| ||
Sbjct 552 CTTGATATCGACTTGCAGAAACAGCTCAGGCCTTACATGGAGAACATTG-TGCCACTCCC 610
Query 555 TGGAATCTAT-GACCCTGATTTCATTGCTGCGAATCAAGGGTCACGTGCTAA-TAGCGTG 612
||| |||| | || ||||||||||| ||||| |||||||||||||||||||| | ||||
Sbjct 611 TGGGATCT-TCGATCCTGATTTCATAGCTGCTAATCAAGGGTCACGTGCTAACCA-CGTG 668
Query 613 ATCAAAGGTACCAAGAAGGAACAAGTTGATCACATCATCAAGGACATGAGGGAGTTTAAG 672
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 669 ATCAAAGGTACCAAGAAGGAACAAGTCGACCACATCATCAAGGACATGAGGGAGTTTAAG 728
Query 673 GAGAAGAACAAAGTGGATAAG-TTGGTTGTGT-TATGGACTGCAAACACAGAGCGTTATA 730
|||||||| || ||||||||| ||| | || | | ||||| || ||||||||||||||||
Sbjct 729 GAGAAGAATAAGGTGGATAAGGTTG-TGGT-TCTCTGGACGGCTAACACAGAGCGTTATA 786
Query 731 GCAATGTGATTGTAGGGCTTAATGATACAATGGAGAATCT-ATTGGCTTCTGTTGAAAAG 789
|||||||| | || ||| | || ||||||||||||||||| || || ||||| || | |
Sbjct 787 GCAATGTGGTCGTTGGGATGAACGATACAATGGAGAATCTCAT-GGAGTCTGTGGATAGG 845
Query 790 GACGAGTCTGAGATCTCGCCGTCTACT-TTGTATGCTATTGCTTGTGTTCTTGAAGGTAT 848
|| ||| |||||||||| || || || || ||||| ||||||||||||||||| || ||
Sbjct 846 GATGAGGCTGAGATCTCTCCTTCAACACTT-TATGCGATTGCTTGTGTTCTTGAGGGAAT 904
Query 849 CCCTTTCATCAATGGGAGTCCTCAGAATACTTTTGTCCCCGGTCTTATCGAGT-TGGCTA 907
||| ||||||||||| || ||||| || || ||||| || ||||| || || | |||| |
Sbjct 905 CCCGTTCATCAATGGAAGCCCTCAAAACACCTTTGTTCCAGGTCTAATTGA-TATGGCGA 963
Query 908 T-ATCGAAGAATTGTTT-GATTGGTGGAGATGATTTCAAGAGTGGTCAGACTAAGATGAA 965
| | ||| ||| |||| ||| |||||||||||||||||||||||||| || ||||||||
Sbjct 964 TCAG-GAACAAT-GTTTTGATCGGTGGAGATGATTTCAAGAGTGGTCAAACCAAGATGAA 1021
Query 966 ATCCGTTTTGGTCGATTTCCTTGTTGGAGCTGGCATCAAGCCTACTTCGATTGTGAGCTA 1025
||| || ||||| |||||||| ||||| || || |||||||||||||| |||||||||||
Sbjct 1022 ATCTGTCTTGGTTGATTTCCTAGTTGGCGCAGGAATCAAGCCTACTTCAATTGTGAGCTA 1081
Query 1026 TAATCATTTGGGAAATAACGACGGGATGAACCTCTCAGCGCCGCAGACTTTCCGCTCTAA 1085
||||| |||||||| ||||| || ||||| |||||||| || ||||||||| | |||||
Sbjct 1082 CAATCACTTGGGAAACAACGATGGAATGAATCTCTCAGCTCCACAGACTTTCAGATCTAA 1141
Query 1086 GGAGATTTC-AAAGAGCAATGTTGTAGACGACATGGTAGCTAGTAATGGCATCCTCTTTG 1144
|||||| || ||| |||||||| || ||||| ||||| ||||| ||||| ||||||||||
Sbjct 1142 GGAGATCTCCAAA-AGCAATGTCGTGGACGATATGGTTGCTAGCAATGGTATCCTCTTTG 1200
Query 1145 AGCCCGGTGAACACCCTGACCATGTCGTTGTCATCAAGTATGTACCATATGTTGCGGATA 1204
|||| || |||||||| |||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1201 AGCCTGGGGAACACCCGGACCATGTTGTTGTCATCAAGTATGTACCGTATGTTGCGGATA 1260
Query 1205 GTAAAAGAGCAATGGACGAGTACACGTCTGAGATATTCATGGGAGGGAGGAACACAATTG 1264
|||| |||| |||||||||||||| || ||||||||||||||||||| |||||||||||
Sbjct 1261 GTAAGCGAGCCATGGACGAGTACACATCAGAGATATTCATGGGAGGGAAGAACACAATTG 1320
Query 1265 TGATGCATAACACTTGTGAGGACTCACTCTTGGCTGCTCCAATTATCTTGGATCTTGTTC 1324
||||||| || || || |||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct 1321 TGATGCACAATACCTGCGAGGACTCTCTCTTAGCTGCTCCAATCATCTTGGATCTTGTTC 1380
Query 1325 TTCTCGCTGAACTCAGCACCAGGATCCAATTCAAAGCCGAAGGAGAGGGGAAGTTTCACT 1384
| ||||| || ||||||||||||||||| |||||| |||| |||||||| ||||||||||
Sbjct 1381 TCCTCGCGGAGCTCAGCACCAGGATCCAGTTCAAATCCGAGGGAGAGGGAAAGTTTCACT 1440
Query 1385 CTTTCCACCCGGTAGCTACCATACTCAGTTACCTCACAAAGGCACCTCTTGTACCGCCTG 1444
||||||| || || || ||||||||||| |||||||| |||||||| ||||||||||| |
Sbjct 1441 CTTTCCATCCTGTGGCCACCATACTCAGCTACCTCACCAAGGCACCACTTGTACCGCCGG 1500
Query 1445 GAACACCGGTGGTTAACGCTCTGTCGAAGCAGCGGGCAATGCTGGAAAACATTCTTAGGG 1504
|||| |||||| ||||||| ||||||||||||||||| |||||||| || ||| | ||||
Sbjct 1501 GAACTCCGGTGATTAACGCACTGTCGAAGCAGCGGGCTATGCTGGAGAATATTATGAGGG 1560
Query 1505 CCTGCGTTGGGCTTGCGCCAGAGAACAACATGATCATGGAGTACAAGTGAAGGATGAGGA 1564
| |||||||| || || || |||||||||||||||||||| | |||||||| |||| ||
Sbjct 1561 CGTGCGTTGGACTGGCTCCGGAGAACAACATGATCATGGAATTCAAGTGAAC-ATGAAGA 1619
Query 1565 AG 1566
||
Sbjct 1620 AG 1621
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77710443660
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5