BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932290 Length=1047 Score E Sequences producing significant alignments: (Bits) Value AT2G23080.1 | Symbols: | Protein kinase superfamily protein | ... 1585 0.0 > AT2G23080.1 | Symbols: | Protein kinase superfamily protein | chr2:9827113-9829537 FORWARD LENGTH=1311 Length=1311 Score = 1585 bits (858), Expect = 0.0 Identities = 979/1038 (94%), Gaps = 6/1038 (1%) Strand=Plus/Plus Query 9 TTTTCAGATCAAAATTGATGTCGAAATCTAGGGTTTATACAGATGTTAACGTTGTTCGTC 68 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 99 TTTTCAGATCGAAATTGATGTCGAAAGCTAGGGTTTATACAGATGTTAACGTTGTTCGTC 158 Query 69 CCAAAGAGTATTGGGACTACGAGTCTCTCGTTGTTCAATGGGGTCATCAAGATGATTATG 128 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 159 CTAAAGAGTATTGGGACTACGAGTCTCTCGTTGTTCAATGGGGTCATCAAGATGATTATG 218 Query 129 AGGTTGTGAGGAAAGTTGGTAGAGGAAAATACAGTGAAGTTTTCGAAGGCAAAAACGTCA 188 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 219 AGGTTGTGAGAAAAGTTGGTAGAGGAAAATACAGTGAAGTTTTCGAAGGCAAAAACGTCA 278 Query 189 ATACGAATGAACGCTGCGTTATCAAGATCCTCAAACCCGTAAAAAAGAAGAAGATAAAGA 248 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 279 ATACGAATGAGCGTTGCGTTATCAAGATCCTCAAACCCGTAAAAAAGAAGAAGATAAAGA 338 Query 249 GGGAGATCAAAATACTTCAGAACCTCTGTGGTGGACCAAATATTGTTAAGCTGTATGATA 308 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 339 GAGAGATCAAAATACTTCAGAACCTATGTGGTGGACCAAATATTGTTAAGCTGTATGATA 398 Query 309 TTGTCAGAGATGAGCACTCAAAAACACCTAGCTTGATATTTGAGTTTGTCAACAGTGTGG 368 |||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 399 TTGTTAGAGATGAGCACTCCAAAACACCTAGCTTGGTATTTGAGTTTGTCAACAGTGTGG 458 Query 369 ACTTTAAAGTATTGTATCCTACATTGACTGATTACGATATCCGGTACTATATTTATGAGC 428 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 459 ACTTTAAAGTATTGTATCCAACATTGACTGATTACGATATCCGGTACTATATTTATGAGC 518 Query 429 TTCTGAAGGCACTGGATTTCTGCCATTCTCAAGGAATAATGCATAGGGATGTTAAGCCTC 488 ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 519 TTCTGAAGGCATTGGATTTCTGTCACTCTCAAGGAATAATGCATAGGGATGTTAAGCCTC 578 Query 489 ATAATGTCATGATAGATCATCAGCTGCGTAAACTTCGTCTGATAGATTGGGGCCTTGCTG 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 579 ATAATGTCATGATAGATCATCAGCTGCGTAAACTTCGTCTGATAGATTGGGGCCTTGCTG 638 Query 549 AGTTCTACCATCCCGGAAAAGAGTATAATGTTCGAGTTGCTTC-ACGATACTTCAAGGGT 607 |||| ||||||||||||||||||||||||||||| || || || | |||||||||||||| Sbjct 639 AGTTTTACCATCCCGGAAAAGAGTATAATGTTCGCGTGGCCTCGA-GATACTTCAAGGGT 697 Query 608 CCCGAGCTGCTAGTGGATCTACAGGATTATGACTATTCTTTAGACATGTGGAGCCTTGGC 667 |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 698 CCCGAGCTTTTAGTTGATCTACAGGATTATGACTATTCTTTAGACATGTGGAGTCTTGGT 757 Query 668 TGCATGTTTGCTGGCATGATATTTCGCAAGGAACCGTTCTTCTATGGTCATGATAATCAT 727 ||||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||| Sbjct 758 TGCATGTTTGCTGGCATGATATTCCGTAAGGAACCGTTCTTTTATGGCCATGATAATCAT 817 Query 728 GATCAACTTGTCAAAATCGCCAAGGTGTTGGGAACCGATGAGTTAAA-CACTTACCTTAA 786 ||||||||||||||||| |||||||||||||||||| |||||||| | || |||||| || Sbjct 818 GATCAACTTGTCAAAATTGCCAAGGTGTTGGGAACCAATGAGTTAGATCA-TTACCTAAA 876 Query 787 TAAATATCAGCTGGATCTTGAACCTCAACTGGAAGCACTTGTTGGGAGGCATAACAGGAA 846 ||||||||||| |||||||| ||||||||||||||||||||||| || ||| | || Sbjct 877 CAAATATCAGCTAGATCTTGACCCTCAACTGGAAGCACTTGTTGGAAGACATGTCCCCAA 936 Query 847 ACCATGGTCCAAGTTTATTAATGCCGACAATCAACACTTGGTCTCGCCAGAGGGCA-TTG 905 |||||||||||||||||| || || ||||| ||||| |||||||| || |||| || ||| Sbjct 937 ACCATGGTCCAAGTTTATCAACGCGGACAACCAACATTTGGTCTCACCTGAGG-CAATTG 995 Query 906 ATTTTCTCGATAAGCTTCTTCGGTATGATCATCAAGACAGATTGACCGCAAGAGAAGCCA 965 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 996 ATTTTCTCGATAAGCTTCTTCAGTATGATCATCAAGACAGATTAACCGCAAGAGAAGCCA 1055 Query 966 TGGATCATCCTTACTTCGCTCAAGTTAAAGCCGCAGAGAGCAGCAGACTACGAACTCAGT 1025 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1056 TGGATCATCCATACTTCGCTCAAGTTAAAGCCGCAGAGAGCAGCAGACTACGAACTCAGT 1115 Query 1026 GAAACCGAAGCTTGATTG 1043 ||||||||||||||||| Sbjct 1116 AAAACCGAAGCTTGATTG 1133 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51339298234 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5