BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932325 Length=676 Score E Sequences producing significant alignments: (Bits) Value AT2G23310.1 | Symbols: ATRER1C1 | Rer1 family protein | chr2:99... 1029 0.0 > AT2G23310.1 | Symbols: ATRER1C1 | Rer1 family protein | chr2:9917520-9919258 FORWARD LENGTH=1107 Length=1107 Score = 1029 bits (557), Expect = 0.0 Identities = 642/682 (94%), Gaps = 10/682 (1%) Strand=Plus/Plus Query 2 ACACAGAGAGTATCCACCGATGGAATCCGCAGCTACGGCTGGTGTTCCCACTCCGGTAGC 61 ||| ||||||||||||||||||||||||||||| ||||||| || | | |||||| ||| Sbjct 105 ACAGAGAGAGTATCCACCGATGGAATCCGCAGCAACGGCTGTTG-T-AC-CTCCGGCAGC 161 Query 62 CGCCGCCACCA---CCA---TCACCGATGATAATCTCCAATCGATCGACTCATCATCTCC 115 ||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||| Sbjct 162 CGCCGCCACCACCGCCACCGCCACCGATGATAATCTCCAATCAAGCGACTCATCATCTCC 221 Query 116 CGCCGACGCCGTTAACCGATTGATCCACGCCGTTTCGCAGCGACAACAACACCTTCTCGA 175 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct 222 CGCCGACGCCGTTAACCGATTGATCCACGCCTTTTCGCAGCGACAACAACATCTTCTCGA 281 Query 176 CAAAACGGTGCCTCACGTTCTCTATCGGTGGATCGGTTGCCTCTGTGTCGTATTGATCTA 235 ||||||||| ||||||||||||||||| ||||||| || |||||||| ||||||||||| Sbjct 282 CAAAACGGTTCCTCACGTTCTCTATCGATGGATCGCATGTCTCTGTGTTGTATTGATCTA 341 Query 236 CTTCGTTCGTGTTTACTTTGTGGAAGGCTTCTACATCATCACTTACGCCATCGGAATCTA 295 | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 342 CATCGTTCGTGTTTACTTTGTGGAAGGCTTCTACATCATCACTTACGCCATCGGCATCTA 401 Query 296 CCTTTTGAATCTCATCATTGCTTTTCTTTCTCCTCAAGAAGATCCTGAAGCTTCTCTCAC 355 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 402 CCTTTTGAATCTCATCATTGCTTTTCTATCTCCTCAAGAAGATCCCGAAGCTTCTCTCAC 461 Query 356 TACCGGTGGTTCTCTTCCTACTCGGAGATCCGATGAGTATCGTCCTTTTGTTCGCCGTCT 415 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 462 TTCCGGTGGTTCTCTTCCTACTCGGAGATCCGATGAGTATCGTCCTTTCGTTCGCCGTCT 521 Query 416 CCCTGAGTTCAAATTCTGGTTATCGATCATAAGGGCATTCATCATCGGATTTATGATGAC 475 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 522 CCCTGAGTTCAAATTCTGGTTATCGATCATAAGGGCTTTCATCATCGGATTTATGATGAC 581 Query 476 GTTCTTCGACGTGTTTGATGTACCTGTTTTCTGGCCAATACTTCTTTTCTACTGGGTGAT 535 ||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 582 GTTCTTCGAGGTGTTTGATGTACCTGTATTCTGGCCAATACTTCTCTTCTACTGGGTGAT 641 Query 536 GTTGTTTTTCCTTACGATGAGGAAACAGATACAACATATGATCAAATACAGATATGTTCC 595 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 642 GTTGTTTTTCCTTACGATGAGGAAACAGATACAGCATATGATCAAATACAGATATGTCCC 701 Query 596 TTTCTCTTTCGGGAAAAAGCAGTATGGAAAGAAACCGGCTCCAACAGAGAGCAGTGAATG 655 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 702 TTTCTCTTTTGGGAAAAAGCAGTATGGAAAGAAACCGGCTCCAACAGAGAGCAGTGAATG 761 Query 656 ATCGATCAAA-CTGTTCAGGTC 676 ||| |||||| ||||||||||| Sbjct 762 ATCAATCAAAACTGTTCAGGTC 783 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32702429697 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5