BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932476 Length=1276 Score E Sequences producing significant alignments: (Bits) Value AT2G24360.1 | Symbols: | Protein kinase superfamily protein | ... 2087 0.0 AT4G31170.1 | Symbols: | Protein kinase superfamily protein | ... 1118 0.0 > AT2G24360.1 | Symbols: | Protein kinase superfamily protein | chr2:10364451-10366902 REVERSE LENGTH=1882 Length=1882 Score = 2087 bits (1130), Expect = 0.0 Identities = 1225/1272 (96%), Gaps = 2/1272 (0%) Strand=Plus/Plus Query 2 AATCCTAGATTGGGGGAAGATGCTTGAGGGAGCAAAGTTCAACGTGCTTGCTGTTGGGAA 61 |||| |||||| ||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 339 AATCTTAGATT--GGGAAGATGCTAGAAGGAGCAAAGTTCAACGTGCTTGCTGTTGGGAA 396 Query 62 TCATCACAACAACGACAACAATTACTATGCTTTTACGCAGGAGTTTTATCAGAAACTTAA 121 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 397 TCATCACAACAACGACAACAATTACTATGCTTTTACGCAAGAGTTTTATCAAAAACTTAA 456 Query 122 TGAAGGTTCAAACATGTCCATGGAGAGTATGCAGACTAGTAACGCTGGAGGATCTGTCTC 181 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 457 TGAAGGTTCAAACATGTCCATGGAGAGTATGCAGACGAGTAACGCTGGAGGATCTGTCTC 516 Query 182 AATGTCTGTGGATAACAGTAGTGTTGGTTCCAGCGATGCTCTTATTGGCCACCCGGGTTT 241 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 517 AATGTCTGTGGATAACAGTAGCGTTGGTTCCAGCGATGCTCTTATTGGCCACCCGGGTTT 576 Query 242 GAAGCCTGTGCGTCATTACTCACTCTCTGTTGGACAAAGCGTGTTTCGCCCGGGAAGAGT 301 ||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 577 GAAGCCTGTACGCCATTACTCACTCTCGGTTGGTCAAAGCGTGTTTCGCCCGGGAAGAGT 636 Query 302 TACCCATGCGTTGAATGATGATGCCTTGGCTCAAGCACTGATGGATACCAGGTATCCAAC 361 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 637 TACCCATGCGTTGAATGATGATGCTTTGGCTCAAGCACTGATGGATACCAGGTATCCAAC 696 Query 362 TGAAGGGCTGGCGAACTATGATGAGTGGACGATTGATCTGAGGAACCTCAACATGGGTCC 421 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 697 TGAAGGGCTGACGAACTATGATGAGTGGACGATTGATCTGAGGAAACTCAACATGGGTCC 756 Query 422 TGCCTTTGCTCAAGGGGCTTTCGGTAAATTGTACAAAGGGACTTACAATGGAGAGGATGT 481 ||||||||||||||||||||| |||||||| ||||||||||| ||||| || || ||||| Sbjct 757 TGCCTTTGCTCAAGGGGCTTTTGGTAAATTATACAAAGGGACATACAACGGTGAAGATGT 816 Query 482 AGCGATCAAGATACTGGAGTGGCCAGAGAACAGCCCAGAAAAGGCACAGTTCATGGAACA 541 ||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 817 AGCTATCAAAATACTTGAGCGGCCAGAGAACAGCCCAGAAAAGGCACAGTTCATGGAACA 876 Query 542 ACAGTTTCAGCAAGAGGTGTCTATGCTTGCCAATTTGAAGCACCCAAACATCGTGAGGTT 601 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 877 ACAGTTTCAGCAAGAGGTGTCTATGCTTGCTAATTTGAAGCACCCAAACATTGTGAGGTT 936 Query 602 CATTGGTGCGTGCCGCAAGCCAATGGTGTGGTGTATAGTGACTGAATACGCCAAAGGAGG 661 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 937 CATTGGTGCATGTCGCAAGCCAATGGTGTGGTGTATAGTGACTGAATACGCCAAAGGAGG 996 Query 662 CTCTGTGAGGCAGTTTCTGACAAAGAGACAGAACCGAGCCGTCCCTTTGAAGTTAGCTGT 721 || |||||||||||| |||| | |||||||||||||||||||||||||||||||||||| Sbjct 997 TTCAGTGAGGCAGTTTTTGACTAGGAGACAGAACCGAGCCGTCCCTTTGAAGTTAGCTGT 1056 Query 722 TAAACAGGCTTTAGATGTTGCTAGGGGTATGGCTTATGTCCATGGACGCAACTTCATACA 781 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1057 TAAACAGGCTTTGGATGTTGCTAGGGGTATGGCTTATGTCCATGGACGCAACTTCATACA 1116 Query 782 CAGAGATCTCAAGTCAGATAACCTTCTCATCTCAGCAGATAAGTCCATCAAGATTGCAGA 841 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1117 CAGAGATCTCAAGTCAGATAACCTTCTCATCTCAGCAGATAAGTCCATCAAGATTGCAGA 1176 Query 842 TTTTGGTGTTGCAAGAATTGAAGTTCAAACTGAAGGAATGACACCAGAAACCGGAACTTA 901 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1177 TTTTGGTGTTGCAAGAATTGAAGTTCAAACCGAAGGAATGACACCAGAAACTGGAACTTA 1236 Query 902 CAGATGGATGGCTCCAGAGATGATACAGCATAGAGCCTACAATCAAAAAGTGGATGTCTA 961 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1237 CAGATGGATGGCTCCAGAGATGATACAGCATAGAGCCTACAATCAAAAAGTGGATGTGTA 1296 Query 962 TAGTTTCGGGATCGTGCTGTGGGAGTTAATCACAGGACTGTTACCGTTCCAGAACATGAC 1021 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1297 TAGTTTCGGGATTGTGCTGTGGGAGTTAATCACAGGACTCTTACCGTTCCAGAACATGAC 1356 Query 1022 AGCTGTACAGGCAGCGTTTGCGGTTGTAAACCGAGGAGTGCGTCCAACAGTTCCAAACGA 1081 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct 1357 AGCTGTACAGGCAGCGTTTGCGGTTGTAAACAGAGGAGTGCGTCCAACAGTCCCAAACGA 1416 Query 1082 TTGTCTCCCGGTGCTGAGTGACATCATGACTAGATGTTGGGATGCTAATCCAGAAGTCCG 1141 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 1417 TTGTCTCCCGGTGCTGAGTGACATTATGACTCGATGTTGGGATGCTAATCCAGAAGTCCG 1476 Query 1142 TCCATGTTTTGTGGAGGTTGTGAAGCTGCTTGAAGCTGCGGAAACAGAGATAATGACGAC 1201 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1477 TCCATGTTTTGTGGAGGTTGTGAAGCTGCTTGAAGCTGCAGAAACAGAGATAATGACGAC 1536 Query 1202 AGCGAGAAAAGCCCGTTTCAGATGTTGCTTGAGCCAGCCGATGACGATTGACTAAATAAT 1261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1537 AGCGAGAAAAGCCCGTTTCAGATGTTGCTTGAGCCAGCCGATGACGATTGACTAAATAAT 1596 Query 1262 CCTCCCCTCAAG 1273 || ||||||||| Sbjct 1597 CCCCCCCTCAAG 1608 > AT4G31170.1 | Symbols: | Protein kinase superfamily protein | chr4:15153182-15155703 REVERSE LENGTH=1844 Length=1844 Score = 1118 bits (605), Expect = 0.0 Identities = 1048/1259 (83%), Gaps = 41/1259 (3%) Strand=Plus/Plus Query 20 GATGCTTGAGGGA-GCAAAGTTCAACGTGCTTGCTGTTGGGAATCATCACAACAACGACA 78 ||||||||| | | |||||||| | ||| |||||| || | ||||||||||||||| Sbjct 288 GATGCTTGA-GAATCCAAAGTTCGATTTGCACGCTGTT-GGCA--ATCACAACAACGACA 343 Query 79 ACAATTACTATGCTTTTACGCAGGAGTTTTATCAGAAA-CT----TAATGAAGGTTCAAA 133 ||||||||||||| || || || || |||||||| ||| || || |||||| |||| Sbjct 344 ACAATTACTATGCCTTCACCCAAGACTTTTATCA-AAAGCTCGGGGAA-GAAGGTACAAA 401 Query 134 CATGTCCATGGAGAGTATGCAGACTAGTAACGCTGGAGGATCTGTCTCAATGTCTGTGGA 193 |||||| | || ||||||||||| ||||| |||||||| ||||| ||||||||||| || Sbjct 402 CATGTCTGTTGACAGTATGCAGACAAGTAATGCTGGAGGGTCTGTGTCAATGTCTGTCGA 461 Query 194 TAACAGTAGTGTTGGTTCCAGCGATGCTCTTATTGGCCACCCGGGTTTGAAGCCTGTGCG 253 ||||||||| |||||||| || ||||||||||||||||| || |||||||||||| |||| Sbjct 462 TAACAGTAGCGTTGGTTCGAGTGATGCTCTTATTGGCCATCCTGGTTTGAAGCCTATGCG 521 Query 254 TCAT---TACTCACTCTCTGTTGGACAAAGCGTGTTTCGCCCGGGAAGAGTTACCCATGC 310 ||| ||||| ||||| | ||| |||||||| ||||| || |||| |||||| ||||| Sbjct 522 CCATCCCTACTCTCTCTCGGATGGCCAAAGCGTATTTCGGCCAGGAAAAGTTACTCATGC 581 Query 311 -GTTGAATGATGATGCCTTGGCTCAAGCACTGATGGATACCAGGTATCCAACTGAAGGG- 368 || || ||||||||||| || ||||| ||||||||| | ||||||||| | |||| Sbjct 582 ACTT-AACGATGATGCCTTAGCACAAGCGTTGATGGATAGTAAGTATCCAACCG-AGGGA 639 Query 369 CTGGCGAACTATGATGAGTGGACGATTGATCTGAGGAACCTCA-ACATGGGTCCTGCCTT 427 |||| ||||||||| |||||||| || ||||||||||| || | | ||||||||||| || Sbjct 640 CTGGTGAACTATGAAGAGTGGACAATAGATCTGAGGAAACT-ACATATGGGTCCTGCTTT 698 Query 428 TGCTCAAGGGGCTTTCGGTAAA-TTGTACAAAGGGACTTACAATGGAGAGGATGTAGCGA 486 ||||||||||||||| || ||| || |||| |||||||||||| ||||| |||||||| | Sbjct 699 TGCTCAAGGGGCTTTTGG-AAAGTTATACAGAGGGACTTACAACGGAGAAGATGTAGCCA 757 Query 487 TCAAGATACTGGAGTGGCCAGAGAACAGCCCAGAAAAGGCAC-AGTTCATGGAACAACAG 545 | ||| |||| ||| || |||| | || ||| |||||||||| || | | ||||| ||| Sbjct 758 TTAAGCTACTCGAGAGGTCAGATAGCAACCCTGAAAAGGCACAAG-CCCTCGAACAGCAG 816 Query 546 TTTCAGCAAGAGGTGTCTATGCTTGCCA-ATTTGAAGCACCCAAACATCGTGAGGTTCAT 604 |||||||| || || |||||||||| || ||||||||| || |||||||| ||||| || Sbjct 817 TTTCAGCAGGAAGTTTCTATGCTTG-CATTTTTGAAGCATCCTAACATCGTTAGGTTTAT 875 Query 605 TGGTGCGTGCCGCAAGCCAATGGTGTGGTGTATAGTGACTGAATACGCCAAAGGAGGCTC 664 |||||||||| || || ||||||||||| || ||||||||||| || |||||||| || Sbjct 876 TGGTGCGTGCATTAAACCGATGGTGTGGTGCATCGTGACTGAATATGCAAAAGGAGGGTC 935 Query 665 TGTGAGGCAGTTTCTGACAAAGAGACAGAACCGAGCCGTCCCTTTGAAGTTAGCTGTTAA 724 ||| || ||||||||||| |||||||| |||||||| || ||||||||||||||||||| Sbjct 936 TGTCAGACAGTTTCTGACTAAGAGACAAAACCGAGCTGTGCCTTTGAAGTTAGCTGTTAT 995 Query 725 ACAGGCTTTAGATGTTGCTAGGGGTATGGCTTATGTCCATGGA-CGCAACTTCATACACA 783 ||||| || |||||||| |||||||||||||| |||||| || |||||||| |||||| Sbjct 996 GCAGGCGTTGGATGTTGCCAGGGGTATGGCTTACGTCCAT-GAGCGCAACTTTATACACC 1054 Query 784 GAGATCTCAAGTCAGATAACCTTCTCATCTCAGCAGATAAGTCCATCAAGATTGCAGATT 843 | ||||| |||||||||||||| ||||| ||||| ||| ||||||||||||||| |||| Sbjct 1055 GGGATCTAAAGTCAGATAACCTCCTCATATCAGCTGATCGGTCCATCAAGATTGCTGATT 1114 Query 844 TTGGTGTTGCAAGAATTGAAGTTCAAACTGAAGGAATGACACCAGAAACCGGAACTTACA 903 |||||||||||||||||||||||||||| ||||| ||||||||||| || |||||||||| Sbjct 1115 TTGGTGTTGCAAGAATTGAAGTTCAAACCGAAGGGATGACACCAGAGACTGGAACTTACA 1174 Query 904 GATGGATGGCTCCAGAGATGATACAGCATAGAGCCTACAATCAAAAAGTGGATGTCTATA 963 |||||||||| ||||||||||| ||||| ||| |||||| |||||||||||| || |||| Sbjct 1175 GATGGATGGCACCAGAGATGATCCAGCACAGACCCTACACTCAAAAAGTGGACGTGTATA 1234 Query 964 GTTTCGGGATCGTGCTGTGGGAGTTAATCACAGGACTGTTACCGTTCCAGAACATGACAG 1023 |||| || ||||||||||||||||| || ||||| ||||||||||||||||||||||| | Sbjct 1235 GTTTTGGAATCGTGCTGTGGGAGTTGATTACAGGTCTGTTACCGTTCCAGAACATGACGG 1294 Query 1024 CTGTACAGGCAGCGTTTGCGGTTGTAAACCGAGGAGTGCGTCCAACAGTTCCAA-ACGAT 1082 | || ||||| || ||||| || || ||| ||||||| ||||||||||| ||| | ||| Sbjct 1295 CGGTTCAGGCTGCATTTGCAGTGGTGAACAGAGGAGTCCGTCCAACAGTCCCAGCA-GAT 1353 Query 1083 TGTCTCCCGGTGCT-GAGTGACATCATGACTA-GATGTTGGGATGCTAATCCAGAAGTCC 1140 ||||| || ||||| | | || |||||||| | | || |||||||| | || ||||||| Sbjct 1354 TGTCTTCCTGTGCTTG-GAGAGATCATGAC-ACGTTGCTGGGATGCGGACCCTGAAGTCC 1411 Query 1141 GTCCATGTTTTGTGGAGGTTGTGAAGCTGCTTGAAGCTGCGGAAACAGAGATAATGACGA 1200 |||| ||||||| ||| |||| || || || || || |||||||| ||||||||||||| Sbjct 1412 GTCCTTGTTTTGCAGAGATTGTCAATCTTCTGGAGGCGGCGGAAACTGAGATAATGACGA 1471 Query 1201 CA-GCGAGAAAAGCCCGTTTCAGATGTTGCTTGA-GCCAGCCGATGACGATT-GACTAA 1256 | | ||||||||||||||||||||||||| ||| || | || ||||| | | |||||| Sbjct 1472 -ATGTGAGAAAAGCCCGTTTCAGATGTTGCATGACGCAA-CCAATGAC-AGTCGACTAA 1527 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62750681250 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5