BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932734 Length=1068 Score E Sequences producing significant alignments: (Bits) Value AT2G25670.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 1642 0.0 AT4G32610.1 | Symbols: | copper ion binding | chr4:15728143-15... 606 1e-172 > AT2G25670.1 | Symbols: | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928 proteins in 1799 species: Archae - 86; Bacteria - 6347; Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses - 259; Other Eukaryotes - 13792 (source: NCBI BLink). | chr2:10928664-10931062 REVERSE LENGTH=1690 Length=1690 Score = 1642 bits (889), Expect = 0.0 Identities = 1019/1079 (94%), Gaps = 19/1079 (2%) Strand=Plus/Plus Query 1 TAGCTGAATCGTGTGTTAAGATGGCTGGAGGTGGAAACAGGAGAGATGAAGGATCGATCA 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 317 TAGCTGAATCGT-TGTTAAGATGGCTGGAGGTGGAAACAGGAGAGATGAAGGATCGATCA 375 Query 61 CGATCCAGAGTACCAATTTGTTTGCAGCTTTGGATACTCGTAAGAAGAAGAAGAAG--T- 117 |||||||||| || |||||||||||||| ||||| ||||||||||||||||||||| | Sbjct 376 CGATCCAGAGCACTAATTTGTTTGCAGCATTGGACACTCGTAAGAAGAAGAAGAAGTCTG 435 Query 118 ------CAGGGAAGAACAAAGGGTCTTCTAAGTCACGAGAGCCAGAGAAGGAGCCTGAGC 171 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 436 ACAAGGCAGGGAAGAGCAAAGGGTCTTCTAAGTCACGAGAGCCAGAGAAGGAGCCTGAGC 495 Query 172 CTCAGGTCTTTTGGGCACCTACTCCGTTGAAAGTTAAGTCTTGGGCTGATATtgatgatg 231 ||||||||| |||||| ||||| || |||||||||||||||||||||||||||||||||| Sbjct 496 CTCAGGTCTATTGGGCTCCTACGCCTTTGAAAGTTAAGTCTTGGGCTGATATTGATGATG 555 Query 232 acgatgatgatgatgaCTATTATGCAACCACTGCTCCTCCTCAGTCTGGTTGGAGCACTT 291 | || || ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 556 AAGACGACGATGATGACTATTATGCAACCACTGCTCCTCCTCAGTCTGGTTGGAGTACTT 615 Query 292 CTGTGCCTTCCCATTCGGATTCGAAAGACGTTCATGTCGAGGAAAGTGAAAGTGAGGACG 351 || ||||||||||| | ||||| |||||||||||||| |||||||||||||||||||| | Sbjct 616 CTCTGCCTTCCCATACTGATTCCAAAGACGTTCATGTTGAGGAAAGTGAAAGTGAGGAAG 675 Query 352 ATATTCTTGATGAAGGTGATGATGATGTGGAGGAAGAGCAGGAACAGGAAACAGAGGTAC 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 676 ATATTCTTGATGAAGGTGATGATGATGTGGAGGAAGAGCAGGAACAGGAAACAGAGGTAC 735 Query 412 AGGTTCATCCAGAGCCTGAGCCTGAGGTGAAGAAAGCTCCTGAAGTTCCTGCACCTCCTA 471 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 736 AGGTTCATCC--A----GAGCCTGAGGTGAAGAAAGCTCCTGAAGTTCCTGCACCTCCTA 789 Query 472 AAGAGGCAGAGAGGCAACTTTCCAAGAAAGAGAGGAAAAAGAAGGAACTTGCTGAGCTTG 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 790 AAGAGGCAGAGAGGCAACTTTCCAAGAAAGAGAGGAAAAAGAAGGAACTTGCTGAGCTTG 849 Query 532 AGGCTTTGTTGGCTGATTTTGGTGTTGCTCCCAAGGAGAATAATGGCCAAGATGAATTTC 591 | |||||||||||||||||||| ||||| ||||||||||| ||||||| ||| |||| || Sbjct 850 AAGCTTTGTTGGCTGATTTTGGAGTTGCCCCCAAGGAGAACAATGGCCTAGAGGAATCTC 909 Query 592 AAGAGGCCAAACATGAAAAGAAAGAAGATGTCAATGGAGAGGGAGAGAAGAAGGAGAATG 651 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 910 AAGAGGCTGGACAAGAAAAGAAAGAAGATGTCAATGGAGAGGGAGAGAAGAAGGAGAATG 969 Query 652 CAGCAGGTGGGGAGTCAAAGGCATcaaaaaagaagaagaagaaggataagcagaaggagg 711 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 970 CAGCAGGTGGGGAGTCAAAGGCATCAAAAAAGAAGAAAAAGAAGGATAAGCAGAAGGAGG 1029 Query 712 taaaagaatctcaagagcagcaagcaaaCAACAATGCTGATGCTGTAGATGAAGCTGCTG 771 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1030 TAAAAGAATCTCAAGAGCAACAAGCAAACAACAATGCCGATGCTGTAGATGAAGCTGCTG 1089 Query 772 GGTCTGAACCAACTGAGGAAGAAACTCCAATTGATGTCAAAGAAAGGCTGAAA-AAGCTT 830 ||||||||||||||||||||||| |||||||||| ||||| |||||| | ||| |||||| Sbjct 1090 GGTCTGAACCAACTGAGGAAGAATCTCCAATTGACGTCAAGGAAAGGAT-AAAGAAGCTT 1148 Query 831 GCATCCATGAAGAAGAAGAAGTCAGGCAAAGAGGTGGATGCTGCAGCTAAAGCTGCTGCG 890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1149 GCATCCATGAAGAAGAAGAAGTCAGGCAAAGAGGTGGATGCTGCAGCTAAAGCTGCTGCG 1208 Query 891 GAGGAAGCAGCTGCAAGACGTAAGAAGCTGGCCGCTGCAAAGAAGAAGGAGAAGAACCAC 950 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 1209 GAGGAGGCAGCTGCAAGACGTAAGAAGCTGGCCGCGGCAAAGAAGAAGGAGAAGAATCAC 1268 Query 951 TATAACCAACAGCCTGTGCGGTAAA-TCCTGAATCATCACCATTTTGATCTTGATGGAAA 1009 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 1269 TATAACCAACAGCCTGTGCGGTAAAATCCTGAATCACCACCATTTTGATCTTGATGGAAA 1328 Query 1010 TGCAAATATGAACATGTATTTCGCCGTATATTGTTCATATGAGTCTCTGTCCTAATAAA 1068 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1329 TGCAAATATGAACATGTATTTCGCCGTATATTGTTCATATGAGTCTCTGTCCTAATAAA 1387 > AT4G32610.1 | Symbols: | copper ion binding | chr4:15728143-15730356 REVERSE LENGTH=1640 Length=1640 Score = 606 bits (328), Expect = 1e-172 Identities = 782/990 (79%), Gaps = 76/990 (8%) Strand=Plus/Plus Query 18 AAGATGGCTGGAGGTGGAAACAGGAGAGATGAAGGATCGAT-CACGATCCAGAGTACCAA 76 ||||||| ||| |||||||||||||||||||| |||||||| | |||| |||| ||||| Sbjct 457 AAGATGGTTGGTGGTGGAAACAGGAGAGATGAGGGATCGATGC-CGATTCAGAACACCAA 515 Query 77 TTTGTTTGCAGCTTTGGATAC-TCGTAAGAAGAAGAAGAAGTC-----A-G--GG-AAGA 126 |||||||| ||||||||||| ||| | ||||||||||||||| | | || |||| Sbjct 516 CTTGTTTGCTGCTTTGGATACTTCG-AGGAAGAAGAAGAAGTCTGATAAGGCTGGTAAGA 574 Query 127 ACAAAGGGTCTTCTAAGTCACG-AGAGCCAGAGAAGGAGCCTGAGCCTCAGGTCTTT-TG 184 ||||| || |||||| | | ||| || |||||||||||||||| ||||| ||| || Sbjct 575 GCAAAGCTTCCTCTAAGAGA-GAAGATTCACAGAAGGAGCCTGAGCCACAGGT-TTTCTG 632 Query 185 GGCACCTACTCCGT-TGAAAGTTAAGTCTTGGGCTGATATtgatga-tgacgatgatgat 242 ||||||||| || | | |||| ||| ||||||||||||| ||| | || ||||| ||| Sbjct 633 GGCACCTACGCC-TCTCAAAGCAAAGGCTTGGGCTGATATCGAT-AGCGATGATGAAGAT 690 Query 243 gatgaCTATTATGCAACCACTGCTCCTCCTCAGT--CTGGTTGGAGCACTTCTG-TGCCT 299 ||||| ||||| || ||||||||||| ||||||| || | ||||||||||||| ||| Sbjct 691 GATGATTATTACGCTACCACTGCTCCACCTCAGTCCCT-G-TGGAGCACTTCTGAAGCC- 747 Query 300 TCCCATTCGGATTCGAAAGACGTTCATGTC-GAGGAAAGTGAAAGTGAGGACGATATTCT 358 |||||||| ||| | |||||||||| | | ||||||| |||||| || || || | ||| Sbjct 748 TCCCATTCAGATGCTAAAGACGTTCCCG-CTGAGGAAATTGAAAGCGAAGAAGACACTCT 806 Query 359 TGATGA---AGGTGATGATGATGTGGAGGAAGAGCAGGAACAGGAAACAGAGGTACAGGT 415 |||||| || ||||||||||||||||||||| || || |||| ||||||| ||| || Sbjct 807 TGATGATGGAGATGATGATGATGTGGAGGAAGATCACGAGCAGGGAACAGAGACACAAGT 866 Query 416 TCATCCAG-AGCCTGAGCCTGAGGTGAAGAAA-GCTCCTGAAGTTCCTGCACCTCCTAAA 473 |||||||| || | |||||||||||||| ||| ||||||||||||| ||| |||||||| Sbjct 867 TCATCCAGAAG-CAGAGCCTGAGGTGAA-AAAGGCTCCTGAAGTTCGTGCTCCTCCTAAG 924 Query 474 GAGGCAGAGAGGCAACTTTCCAAGAAAGAGAGGAAAAAGAAGGAACTTGCTGAGCTTGAG 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 925 GAGGCAGAGAGGCAACTTTCCAAGAAAGAGAGGAAAAAGAAGGAACTTGCTGAGCTTGAG 984 Query 534 GCTTTGTTGGCTGATTTTGGTGTTGCTCCCAAGGA-GAATAATGGCCAAGATGAATTTCA 592 |||||| | || |||||||| ||||| |||| || || ||||| ||| | || | ||| Sbjct 985 GCTTTGCTAGCAGATTTTGGAGTTGCAACCAAAGATGAG-AATGGTCAACAAGACTCTCA 1043 Query 593 AGAGGCCAAACATGAAAAGAAAGAAGATGTCAATGGA-GAGGGAGAGAAGAAGGAGAATG 651 ||| || || |||||||||| || |||| | |||||||||||||||||||| Sbjct 1044 AGAT---AAGGGGGAGAAGAAAGAAG-TG--AATG-ATGAGGGAGAGAAGAAGGAGAA-- 1094 Query 652 CAGCAGGTGGGGAGTCAAAGGCATcaaaaaagaagaagaagaaggataagcagaaggagg 711 || || || || |||||||| ||||| |||||||| |||||||| || ||||||||| Sbjct 1095 CA-CAACCGGAGAATCAAAGGCCTCAAAGAAGAAGAAAAAGAAGGACAAACAGAAGGAGC 1153 Query 712 taaaagaatctcaagagcagcaagcaaaCAACAA-TGCTGATGCTGTA-GATGAAGCTGC 769 |||||||||| || ||| | ||| || | ||| | | ||||||| | | ||| | | | Sbjct 1154 TAAAAGAATCCCA-GAGT-G-AAGTGAAGAGCAACT-CGGATGCTGCAAG-TGA-G-TCC 1206 Query 770 TGGGTCTGAACCAACTGAGGAAGAAA-CT-C--CAATTGATGTCAAAGAAAGGCTGAAA- 824 | |||| | | ||||| | || | | || || ||||||||| |||| ||| Sbjct 1207 -G---CTGAGC-AG--GAGGA-GTCTTCTTCTTCCATCGACGTCAAAGAACGGCT-AAAG 1257 Query 825 AAGCTTGCATCCATGAAGAAGAAGAAGTCAGGCAAAGAGGTGGATGCTGCAGCTAA-AGC 883 ||| ||||||| |||||||||||||| ||| |||| ||||| |||| ||| | || ||| Sbjct 1258 AAGATTGCATCAATGAAGAAGAAGAAATCAAGCAAGGAGGTTGATGGTGCTTC-AACAGC 1316 Query 884 TGCTGCGGAGGAAGCAGCTGCAAG-ACGTAAGAAGCTGGCCGCTGCAAAGAAGAAGGAGA 942 |||||| ||||||||||||| || | | | ||| ||||||| || ||||| || || | Sbjct 1317 TGCTGCAAAGGAAGCAGCTGCGAGGAAGGCA-AAGTTGGCCGCAGCGAAGAAAAAAGAAA 1375 Query 943 AGAACCACTATAACCAACAGCCTGTGCGGT 972 |||| |||| || || || |||||| ||| Sbjct 1376 AGAAAAACTACAATCAGCAACCTGTGAGGT 1405 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52308967890 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5