BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932740 Length=385 Score E Sequences producing significant alignments: (Bits) Value AT2G25720.1 | Symbols: | unknown protein; Has 38 Blast hits to... 486 5e-137 > AT2G25720.1 | Symbols: | unknown protein; Has 38 Blast hits to 38 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:10955519-10956052 REVERSE LENGTH=534 Length=534 Score = 486 bits (263), Expect = 5e-137 Identities = 335/368 (91%), Gaps = 11/368 (3%) Strand=Plus/Plus Query 21 ATGTCAGATCCTTACGAGAGAGTGAACGGTGGAAGATTGGCGTTCAAAGGAGGAGATCTA 80 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 36 ATGTCAGACCCTTACGAGAGAGTGAATGGTGGAAGATTGGCGTTCAAAGGAGGAGATCTA 95 Query 81 GCCACAAGGAAATCGATCGACaagaagaataagaagaagcagaagaagaagaaagaaaag 140 || ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct 96 GCGACAAGGAAATCGATCGAAAAGAAGAAGAAGAAGAAGCAGAAGAAGAACAAAGAAAAG 155 Query 141 ctcga--g-g--ga-ga---agtgaagaTGGCTCCCGACGGTTCAGCCACTTCCGCCGCT 191 ||||| | | || || || ||||| ||||| ||||||||| || || |||||||| Sbjct 156 CTCGACGGTGTTGAGGATGGAGCGAAGACAGCTCCTGACGGTTCACCCCCTCCCGCCGCT 215 Query 192 GCCGTTGTAGATGATGATATATACTCAATTGATGCGGCGAAGAAGAAGAAGTACGATGAC 251 |||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 216 GCCGCTGGAGATGAAGATATATACTCAATTGATGCGGCGAAGAAGAAGAAGTACGATGAC 275 Query 252 CTGTTTCCTGTGGAGGCGAAGAAGTTTGGTTACATTCCGAAATCAAATTTCGAATCCATG 311 || ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | Sbjct 276 CTATTTCCTGTGGAGGCGAAGAAGTTCGGTTACATTCCGAAAGCAAATTTCGAATCCAGG 335 Query 312 GAAGATGCTCTTGACGATCGCGTCAAGAAGAAAGCTGATCGTTATTGTAAATAAACTCT- 370 ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 336 GAAGATGCTCTTGACGATCGCGTCAAGAAGAAAGCTGATCGCTACTGTAAATAAACTCTT 395 Query 371 CTT-TTTG 377 ||| |||| Sbjct 396 CTTGTTTG 403 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18146657389 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5