BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932816 Length=1104 Score E Sequences producing significant alignments: (Bits) Value AT2G26060.1 | Symbols: emb1345 | Transducin/WD40 repeat-like su... 1797 0.0 AT4G32990.1 | Symbols: | Transducin/WD40 repeat-like superfami... 627 9e-179 > AT2G26060.1 | Symbols: emb1345 | Transducin/WD40 repeat-like superfamily protein | chr2:11102301-11105355 FORWARD LENGTH=1386 Length=1386 Score = 1797 bits (973), Expect = 0.0 Identities = 1051/1090 (96%), Gaps = 0/1090 (0%) Strand=Plus/Plus Query 15 TCATAGATGGATTTGATGGAGAAGAACTTGGAGTTAGTGGAGATTCAGAAACTTGAAGGC 74 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 94 TCATAGATGGATTTGATGGAGAAGAACTTGGAGTTAGTGGAGATTCAGAAACTAGAAGGC 153 Query 75 CACACCGATCGGGTTTGGAGCGTAGCTTGGAACCCTGTCTCTTCTCACGCCGACGGTGTT 134 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 154 CACACCGATCGTGTTTGGAGCGTAGCTTGGAACCCCGTTTCTTCTCACGCCGACGGTGTT 213 Query 135 TCACCGATTCTTGCTTCTTGCAGTGGCGATAGCACCGTTCGAATCTGGGAACAAAGCTCT 194 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 214 TCACCGATTCTTGCTTCTTGCAGTGGCGATAACACTGTTCGAATCTGGGAACAAAGCTCT 273 Query 195 CTCTCTCGCTCCTGGACTTGCAAGACAGTTTTGGATGAAACGCATACAAGAACTGTGAGG 254 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 274 CTCTCTCGCTCCTGGACTTGCAAGACAGTTTTGGAAGAGACGCATACAAGAACTGTGAGG 333 Query 255 TCATGTGCTTGGTCACCCTCAGGACAGTTATTGGCCACTGCAAGTTTTGATGGTACCACT 314 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 334 TCGTGCGCTTGGTCACCCTCAGGACAGTTATTGGCCACTGCAAGTTTTGATGGTACCACT 393 Query 315 GGCATTTGGAAGAAATATGGTTCTGAGTTTGACTGTATTTCCACTTTAGAGGGACATGAA 374 |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||| Sbjct 394 GGCATTTGGAAGAATTACGGTTCTGAGTTTGAGTGTATTTCCACTTTGGAGGGACATGAA 453 Query 375 AACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCACACCTTGCAACATGTAGTAGA 434 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 454 AACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCATGCCTTGCAACATGTAGTAGA 513 Query 435 GATAAGTCTGTTTGGATTTGGGAAGTGCTTGAAGGGAATGAGTATGATTGTGCTGCGGTG 494 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 514 GATAAGTCTGTTTGGATTTGGGAAGTGCTTGAAGGGAATGAATATGACTGTGCTGCGGTA 573 Query 495 TTAACTGGGCATACACAAGATGTGAAGATGGTTCAATGGCATCCTACCATGGATGTTTTA 554 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 574 TTAACTGGGCATACACAAGATGTGAAGATGGTTCAGTGGCATCCCACCATGGATGTTTTA 633 Query 555 TTTTCTTGCAGTTATGATAACACCATAAAGGTTTGGTGGTCTGAAGATGATGATGGTGAG 614 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 634 TTTTCTTGCAGTTATGATAACACCATCAAGGTTTGGTGGTCTGAAGATGATGATGGTGAG 693 Query 615 TATCAATGTGTCCAAACCTTAGGTGAATCTAACAACGGTCACTCTTCTACGGTGTGGTCC 674 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 694 TATCAATGTGTCCAAACCTTAGGTGAATCTAACAACGGTCACTCTTCAACGGTATGGTCC 753 Query 675 ATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAGTGATGATCTAACATTGAAG 734 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 754 ATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAGTGATGATCTAACCTTGAAG 813 Query 735 ATATGGGGGACGGATATTGCCAGGATGCAGTCTGGTGAAGATTATGCACCTTGGATTCAT 794 ||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct 814 ATATGGGGGACAGATATTGCCAAGATGCAGTCTGGTGAAGAATATGCACCTTGGATTCAT 873 Query 795 CTTTGTACTCTCTCTGGTTATCATGACCGTACCATATACTCTGCTCACTGGTCAAGGGAT 854 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 874 CTTTGTACTCTCTCTGGCTATCATGACCGTACCATATACTCAGCTCACTGGTCAAGGGAC 933 Query 855 GACATTATTGTCAGTGGAGCAGGCGATAATGCTATACGGTTGTTTGTGGAGAGCAAACAT 914 |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 934 GACATTATTGCCAGTGGAGCAGGCGATAATGCTATACGGTTGTTTGTGGACAGCAAACAT 993 Query 915 GACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAAGAAGAATAAAGCACATGAAAAT 974 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 994 GACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAAGAAGAATAAAGCACATGAAAAT 1053 Query 975 GATGTAAATTCTGTCCAATGGTCACCCGGTGAGGGGAACCGGTTACTTGCCTCGGCTAGT 1034 |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 1054 GATGTAAACTCTGTCCAATGGTCACCCGGTGAGGGGAACCGGTTGCTTGCGTCGGCTAGT 1113 Query 1035 GACGATGGGATGGTCAAGATTTGGCAGCTTGCAACTAAACAGTGACTGGTGTTGGTTTGG 1094 || ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 1114 GATGATGGGATGGTCAAGATTTGGCAGCTTGCAACTAAACCGTGACTGCTGTTGGTTTGG 1173 Query 1095 ATAGGTTCTG 1104 |||||||||| Sbjct 1174 ATAGGTTCTG 1183 > AT4G32990.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr4:15920230-15922658 FORWARD LENGTH=987 Length=987 Score = 627 bits (339), Expect = 9e-179 Identities = 594/716 (83%), Gaps = 22/716 (3%) Strand=Plus/Plus Query 365 GGGACATGAAAACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCACACCTTGCAAC 424 ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 267 GGGACATGAAAGCGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCGTTGCTTGCAAC 326 Query 425 ATGTAGTAGAGATAAGTCTGTTTGGATTTGGGAAGT---GCTTGAAG-GGA--ATGAGTA 478 ||| ||||||| |||||||| |||||||||||| | | || | ||| |||| | Sbjct 327 TTGTGGTAGAGACAAGTCTGTCTGGATTTGGGAAATACAACCAGAGGAGGACGATGAATT 386 Query 479 TGATTGTGCTGCGGTGTTAACTGGGCATACACAAGATGTGAAGATGGTTC-AATGGCATC 537 |||| | ||| ||||||||||| ||| || ||||||| ||||||| || ||||||| Sbjct 387 TGATACTATTGCAGTGTTAACTGGTCATTCAGAAGATGTTAAGATGG-TCTTGTGGCATC 445 Query 538 CTACCATGGATGTTTTATTTTCTTGCAGTTATGATAACACCATAAAGGTTTGGTGGTCTG 597 | |||||||||||||| || |||||||||||||||||||| || ||| ||||||| |||| Sbjct 446 CCACCATGGATGTTTTGTTCTCTTGCAGTTATGATAACACTATCAAGATTTGGTGCTCTG 505 Query 598 AAGATGATGATGGTGAGTATCAA-TGTGTCCAAACCTTAGGTGAATC-TAACAACGGTCA 655 | ||||| |||||||| ||| || ||||| ||||||||| ||||| | |||||| ||||| Sbjct 506 AGGATGAAGATGGTGATTAT-AATTGTGTACAAACCTTAAGTGAA-CTTAACAATGGTCA 563 Query 656 CTCTTCTACGGTGTGGTCCATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAG 715 |||||||| || ||| ||||| ||||| ||||||||||||||||||||||||||||| Sbjct 564 TTCTTCTACCGTCTGGAGTATCTCTTTTAATGCTGCAGGGGACAAGATGGTCACTTGTAG 623 Query 716 TGATGATCTAACATTGAAGATATGGGGGACGGATATTGCCAGGATGCAGTCTGGTGAAG- 774 |||||||||| || |||| |||||| ||| |||||| | |||||||| |||||||||| Sbjct 624 TGATGATCTAGCAGTGAAAATATGGAAGACAGATATTTCAAGGATGCAATCTGGTGAAGG 683 Query 775 ATTATGCACCTTGGATTCATCTTTGTACTCTCTCTGGTTATCATGACCGTACCATATACT 834 || ||| ||| |||| |||| ||||||| |||||||||| ||| || ||||||||||| | Sbjct 684 AT-ATGTACCCTGGACTCATGTTTGTACACTCTCTGGTTTTCACGATCGTACCATATATT 742 Query 835 CTGCTCACTGGTCAAGGGATGACATTATTG-TCAGTGGAGCAGGCGATAATGCTATACGG 893 | | ||| ||||||||||| | |||||| | ||||||||||||||| || |||||| | Sbjct 743 CAGTTCATTGGTCAAGGGACGGTGTTATTGCT-AGTGGAGCAGGCGATGATACTATACAG 801 Query 894 TTGTTTGTGGAGAGCAAACA-TGACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAA 952 || |||||||| ||| | || |||||||||||||||||||||||| || |||||| | || Sbjct 802 TTATTTGTGGACAGCGA-CAGTGACTCTGTTGATGGACCTTCATACAAACTTTTGGTTAA 860 Query 953 GAAGAATAAAGCACATGAAAATG-ATGTAAATTCTGTCCAATGGTCACCCGGTGAGGGGA 1011 |||| | ||||||||||||| || |||||||||| ||||||||| |||| | | ||| | Sbjct 861 GAAGGAGAAAGCACATGAAA-TGGATGTAAATTCGGTCCAATGGGCACCTGATAAGGA-A 918 Query 1012 A-CCGGTTACTTGCCTCGGCTAGTGACGATGGGATGGTCAAGATTTGGCAGCTTGC 1066 | |||||| ||||||||||| || |||||| ||||| ||||||||| | ||||| Sbjct 919 AGCCGGTTGCTTGCCTCGGCCAGCGACGATAAAATGGTTAAGATTTGGAAACTTGC 974 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54116187510 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5