BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932954 Length=2659 Score E Sequences producing significant alignments: (Bits) Value AT5G06350.1 | Symbols: | ARM repeat superfamily protein | chr5... 2416 0.0 AT5G27010.1 | Symbols: | ARM repeat superfamily protein | chr5... 2254 0.0 > AT5G06350.1 | Symbols: | ARM repeat superfamily protein | chr5:1938781-1944357 FORWARD LENGTH=2794 Length=2794 Score = 2416 bits (1308), Expect = 0.0 Identities = 2288/2736 (84%), Gaps = 168/2736 (6%) Strand=Plus/Plus Query 21 ATGGTTCGCTCCAAAGCTCCTGCGAAGAAGCAGC-------A--AATTGATTTCAAGAAA 71 |||||||||||||| |||||||| |||||||||| | |||||||||||||||| Sbjct 1 ATGGTTCGCTCCAAGGCTCCTGCAAAGAAGCAGCAAAAGAAAGGAATTGATTTCAAGAAA 60 Query 72 ATCAAGAGAAAGCTGGGGAGAAAATTACCTCCACCAAAAAATGCAACTAACACAGAGATT 131 || ||||||||||| |||||||||||||| |||||||| |||||||| ||||| |||||| Sbjct 61 ATTAAGAGAAAGCTCGGGAGAAAATTACCACCACCAAAGAATGCAACCAACACTGAGATT 120 Query 132 AAATCCAAAGAAATTATAATTCCTGAGCAAAGTGTGGCAGCAGAAAAGACTGGCTTTGCT 191 |||||||||| ||||||| ||||||||||||||||||| || ||||||| |||||| ||| Sbjct 121 AAATCCAAAGCAATTATACTTCCTGAGCAAAGTGTGGCTGCTGAAAAGAGTGGCTTAGCT 180 Query 192 ACAAGTAATAAAAACTTGACCTTGGAGGAGCTTCTAG-TAC-GAAGTCGTCATCCCAATG 249 |||||||| ||| |||||| ||| |||| ||||| | || || || ||||| ||||| Sbjct 181 ACAAGTAAGAAAGGCTTGACTTTGAAGGAACTTCT-GCCACAGACTTC-TCATCACAATG 238 Query 250 CTAAAGTTCGCAAAAATGCGTTACT-TGGTATCCAAGACCTTTT-AAAAAGTCATCCAGT 307 | |||||||||||| |||| || | ||||||| |||||||||| || || |||||||| Sbjct 239 CCAAAGTTCGCAAAGATGCATT-GTATGGTATCAAAGACCTTTTCAAGAA-TCATCCAGA 296 Query 308 AGAGCTGCAGTCAAAGAAATATACTATCATACA-ATGTCTTAAGGG-ACGCATTAATGAT 365 |||||| |||||| | |||||| |||||||||| | | | |||| |||||||| |||| Sbjct 297 AGAGCTACAGTCACATAAATATGCTATCATACAGA-AAC-TCAGGGAACGCATTAGTGAT 354 Query 366 GATGATAAGCAAGTGAGAAAAGCTTTTTATGAACTATTTGACACTCAGATCTTTCGTTTT 425 |||||||||| ||||||| | | ||||||| |||||||||| | | | ||||||| | || Sbjct 355 GATGATAAGCTAGTGAGAGATGTTTTTTATCAACTATTTGATATTGACATCTTTCCTCTT 414 Query 426 TGTAAACAAGAGGATATCAAGGGACTTATGGTGTCACCTTTGATGCTATCCATATTTCA- 484 ||| | ||||||||| | |||| ||||||||||||| |||||||| || ||||||| | Sbjct 415 TGT--A-AAGAGGATAACCAGGGCCTTATGGTGTCACTTTTGATGCCATACATATTT-AG 470 Query 485 CGCTATGGCTAATTCA-TTGATTGATGTTCGTTTGGAT-GCTTTCGCTTTTTTACACCTT 542 |||||||||| ||||| | |||||||||||||| ||| |||||| ||||| |||||| Sbjct 471 CGCTATGGCTCATTCAGCT-ATTGATGTTCGTTT-GATGGCTTTCAAATTTTTCCACCTT 528 Query 543 GTTGTGGACTACTACCCGCCTTCATTTTCCATGTATCCTGAAGAGATTCTTGAAAACTAC 602 |||||||| | |||||||||| | |||||| || || ||||| ||||||| ||||||||| Sbjct 529 GTTGTGGAGTTCTACCCGCCTACCTTTTCCTTGGATGCTGAAAAGATTCTCGAAAACTAC 588 Query 603 AAGGATATCATTATTCAGAGCAACCATTTTTATGTGCAAGATAAAACCAATCTAAAGGTA 662 |||| || ||||| |||| || |||||||||||| ||||||||| ||| |||||||| Sbjct 589 AAGG--AT-ATTATACAGAAAAATCATTTTTATGTGGAAGATAAAAGCAAGCTAAAGGTG 645 Query 663 GCTCTTTCCGGGTTGTCACATTGCCTCTCGCTGTTGCCATGTGATGAGATCCACACCAAA 722 |||||||| ||||||||||||||||||||| | |||||||||||||||| | |||||||| Sbjct 646 GCTCTTTCTGGGTTGTCACATTGCCTCTCGGTTTTGCCATGTGATGAGAGCGACACCAAA 705 Query 723 TCACAGAAAAAGC-AT-TTCCAACAAAATGAAACCCTACTCGCCTATGAGCAAGATGCTG 780 ||||| |||||| | ||| | || |||||||| |||||| ||||||||||||||||| Sbjct 706 TCACAAAAAAAGGGACCTTC-A-CAGAATGAAACACTACTCACCTATGAGCAAGATGCTA 763 Query 781 CAAAAGAA-G-GTT--TT--GCCCACGTCTCTGTGAGATTGAAGGAGATTGTTGGAGCCT 834 ||||||| | ||| || ||||| |||| | ||||||||||||| |||||| || || Sbjct 764 CAAAAGATTGTGTTCGTTATGCCCATGTCTATCAGAGATTGAAGGAGGTTGTTGCAGTCT 823 Query 835 TAATCAATTGTTTCCAAGATTTCATTCCACTGCTTCGTGCTCCACGAGGATTGGATCCAC 894 ||||||||||||||||||||||||||||| || ||| |||||| |||||||| ||| ||| Sbjct 824 TAATCAATTGTTTCCAAGATTTCATTCCATTGATTCATGCTCCGCGAGGATTCGATGCAC 883 Query 895 AATCATTAATTGATTGCGTGCACCATATCCT-CTGCAGCATATGTTATGCCATCAAGTTT 953 | ||||| | |||||| | || ||||| || | |||||||| ||||||| ||||||||| Sbjct 884 ATTCATT--T-GATTGCATACAACATATACTTC-GCAGCATAGGTTATGCAATCAAGTTT 939 Query 954 TCGCA--C--A--CTCA-G-ACA--CATACTGCA-----AC-TGAAGAAGAAGAAGTTAC 997 || || | | | || | | | || |||||| || || | ||||||||||| Sbjct 940 TC-CATTCGTAGGCACAAGCAAAGACAGACTGCATGGCGACCTGCATCTGAAGAAGTTAC 998 Query 998 TCTGATGAAACTGGATCACCACATTTCATCAATGTTATCAAAAAAGTTACTTGCTTCTTT 1057 |||||||| | ||||||| ||||| |||| ||| | | |||||||||||||| ||| || Sbjct 999 TCTGATGATATTGGATCAGGACATTGCATCGATGCTGTTAAAAAAGTTACTTGGTTCATT 1058 Query 1058 TCCCCTT-ATTCCC-AAAATC--TGCGTTTCTA-AAAGGAATGATGA-AAGCTACTTTAT 1111 |||||| || || |||| | | | ||| | ||||| |||||| ||| ||||||| Sbjct 1059 TCCCCTCGAT-CCAGAAAA-CAAT-C-TTTATGGAAAGGG-TGATGATAAG-TACTTTAA 1112 Query 1112 CCTCAACGGTGTATTGACAGAAATCTTTTTGGAAGTAAGTGAATGGAGCCACCTTCCTTG 1171 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1113 ACTCAACAGTGTATTGACAGAAATCTTTTTGGAAGTAAGTGAATGGAGCCACCTTCCTAC 1172 Query 1172 TGACCTTTCCTATAGATTTCTGGAATTTATTGAGAATACCCTACTAGGCAAGATCATCAG 1231 ||| |||||| |||||| ||||||||||||||||||||| |||||||||||||||| ||| Sbjct 1173 TGATCTTTCCAATAGATATCTGGAATTTATTGAGAATACACTACTAGGCAAGATCACCAG 1232 Query 1232 GAGCATTAGTC--C--ACC--TATTCACGAAAA-AGCTTTGCTTGCACTCGTGCCTTTTG 1284 ||||||||| | | | |||||||||||| | |||| ||||||||| |||| ||| Sbjct 1233 GAGCATTAGGCTTCGTAAAGATATTCACGAAAAGA-CTTTACTTGCACTCTTGCCCTTTC 1291 Query 1285 TTCCAAAACTTACTT-TGAGGGTGGACCGTGATTGGAGAGATAAACTGATGCAGGCGTTC 1343 |||||||||||| || ||||||| |||||||||||||||||||| || || |||| || Sbjct 1292 TTCCAAAACTTA-TTCTGAGGGTAGACCGTGATTGGAGAGATAATCTTCTGGAGGCATTT 1350 Query 1344 ACTATTACTTTAAGCGATTGCAAACCAGAGTCTCCACTTCAA-TTAGCCTGCATTTCAAT 1402 |||||||| || ||||||||||||||||||||| ||| ||| |||||||||||||||| Sbjct 1351 ACTATTACCTTCAGCGATTGCAAACCAGAGTCTAAACT-CAAATTAGCCTGCATTTCAAC 1409 Query 1403 TGTTAGAGA-ACTGATTATCCCTAATGGAAATATCCTTTATCCCAATG-A--T---CCAA 1455 ||||||||| | ||||||||||||||||| |||||||||||||||||| | | |||| Sbjct 1410 TGTTAGAGACA-TGATTATCCCTAATGGAGATATCCTTTATCCCAATGCAAGTGATCCAA 1468 Query 1456 CCGTAGATAACTACCAGCGT-GCTTGGGTCAACAAACTTCCGTCACTGCTTCATCAGTTG 1514 | ||| || |||||||| || |||||||||||||||||||| || |||||| |||||||| Sbjct 1469 CGGTACATTACTACCAG-GTTGCTTGGGTCAACAAACTTCCATCGCTGCTTAATCAGTTG 1527 Query 1515 GGTGATAAGCATCCCGTTTCTACCCAGGTTGTTTTGCAACTTTTGCTTGACCTTGGGCGA 1574 ||| || |||||||||| ||||| |||||||| |||||||| || || |||||||||||| Sbjct 1528 GGTAATGAGCATCCCGTATCTACTCAGGTTGTGTTGCAACTCTTACTCGACCTTGGGCGA 1587 Query 1575 GTTGGGTTTCTGAAGAATACTTCCCCTGCATTTGAAGAAGGCGTCAGAAACTTCTTCAAC 1634 ||||||| |||||| | ||||||| | | |||||| | | ||||||||||||||| | Sbjct 1588 GTTGGGTGTCTGAA---TGCTTCCCCCACCTGTGAAGATGACATCAGAAACTTCTTCAGC 1644 Query 1635 CCTTATCAGGGAGAAGGTGATGTGCCTGGTGGACCATTTGCAAGTCTCCCTAGGGAAGCC 1694 | || |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||| Sbjct 1645 CTTTGTCAGGGAGAAGGTGATGTACCTGGTGGACCTTTTGCAAGTCTCCCTCGGGAAGCC 1704 Query 1695 CAAGAACTTGCTCTCTCTTTCCTTTACTACTTCACCATAGACCATTTCAGCTCCCCTATG 1754 |||||||| ||||||| |||||||||||||||||||| |||| | ||||||||||||||| Sbjct 1705 CAAGAACTGGCTCTCTGTTTCCTTTACTACTTCACCACAGACAAATTCAGCTCCCCTATG 1764 Query 1755 CTGAGAGCAATAGTTTCATGCTGTTTATATGAACAACTTAAACCAGCTGTGTTGTATCGG 1814 ||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 1765 ATGAAAGCAATAGTTTCATGCTGTTTATATCCACAACTTGAACCAGCTGTGTTGTATCGG 1824 Query 1815 ATAGTGGAAATTCTTCACACTGCGTATAGAGATGGATATATTCAGATTACAGATCATTTT 1874 ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| Sbjct 1825 ATAGTGGAAATTCTTCACACTGCCTATAGAGCTGGATATATCCAGATTACAGATCATTTT 1884 Query 1875 AGCTTC-TTCATCACTCT-AATTGCGCGTTTCAAAGTTGTCCCTCCAGAGA-TGGGG--A 1929 |||||| || ||||| || |||||| ||||||||||||||||| ||| | || | | Sbjct 1885 AGCTTCCTT-ATCAC-CTTAATTGCACGTTTCAAAGTTGTCCCAG-AGAAACTGCAGTCA 1941 Query 1930 T---T-GAGTGTGATGAGCGGCGGGAGACA-------ACATTCAAAGCACTTACAAACCT 1978 | | |||||| |||| ||| | || | | ||||| |||| | ||||||| || Sbjct 1942 TCGATAGAGTGTAATGAACGG-GAGACATATTGTGGCACATTTAAAGAAGTTACAAAGCT 2000 Query 1979 TGTGTGCTCATGTTTGTCAGGAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGAGAA 2038 |||||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||| Sbjct 2001 TGTGTGCTCATGTTTGTCAGAAATGGGTGATAGTTCTCTTGTCCTTCAGATTGTAGAGAA 2060 Query 2039 AGCTTTTG-TCGAACAAATAGGCAAATACTTTATTTTGAAGCCTGCTTTGGACAATGGGT 2097 || |||| |||||||||||| | ||| ||||||||| ||||| ||||||| Sbjct 2061 AG-TTTTACTCGAACAAATAG-----T--TTT-----GAAGCCTGCGTTGGATAATGGGT 2107 Query 2098 GTGGCATACTCAGGATGATCTGCACGTTGGACTCTAAACCC-ACCAGACTTTCTGAAAGC 2156 ||| ||||||||||||||||||| ||||||||||| ||| |||| |||||||||||| Sbjct 2108 GTGCCATACTCAGGATGATCTGCGTGTTGGACTCTAC-CCCTACCACACTTTCTGAAAGG 2166 Query 2157 AGTGTAACCACTCTAAGTGAATTCTTGCCGGGGTATTTGATGGATATAGTCAATTGTATA 2216 |||||||||||||||||||| ||||| ||||| ||| |||| | ||||||||||||||| Sbjct 2167 AGTGTAACCACTCTAAGTGAGTTCTTACCGGGATATATGATCAACATAGTCAATTGTATA 2226 Query 2217 CCAGAAGATAAGGAGAAGTCTTCTTACCTTTACATACAAACATGTCTCTACTATTTAGTA 2276 ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 2227 CCAGAGGATAAGGAGAA--CT-CTTACCTTTACATACAAACATGTCTCTACTATTTAGTA 2283 Query 2277 CCTTGCTTTTTGCT-GTTTGACCGGAGCTCCAAACTCACAGAAGAGGTTCTGAAAAGATT 2335 ||||||| ||| || ||| | ||||||||||||||||||||| ||||||||| |||| | Sbjct 2284 CCTTGCTATTT-CTTGTTCAATCGGAGCTCCAAACTCACAGAACAGGTTCTGATAAGAAT 2342 Query 2336 GCGATTGATGGTTAGTGAAAACACTAAAGCGATGCTGGAATC---ACCGGTCTGGGAGAG 2392 ||||| ||| ||||||||||||| |||||| || ||||| || | | ||||||| Sbjct 2343 GCGATCAATGATTAGTGAAAACACAAAAGCG---CTAGAATCGGTACAAGACAGGGAGAG 2399 Query 2393 CAGTCGAAACTTGTTGAATTTGATACAATGCATTGTCTCTGTGATCCTGCTGATGCACAA 2452 | ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 2400 CGGTCGAAACTCATTGAATATGATACAATGCATTATCTCTGTGATCCTGCTGATGCACAA 2459 Query 2453 CGACGTCAGAGTTAGGAAGATAATATCATCATTCAAGTCAGAGATCGATTTGATTCTGCA 2512 |||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||| || Sbjct 2460 CGACGTCAAAGTTAGGAAGATAATATCGTCATTCAAGCCCGAGATCGATTTGATTCTTCA 2519 Query 2513 CAGCGTTGTCACGTTGCAGTCCTC--GA-GCATGA-C---A--GTAGAAGGAAAGCATAT 2563 | |||| |||||||||||||||| || ||| || | | ||||||||||||||||| Sbjct 2520 GAACGTTATCACGTTGCAGTCCTCACGAAGCACGAGCTTGACTGTAGAAGGAAAGCATAT 2579 Query 2564 GATGAAGATTGCAGGAGAGCGACTTAGGATTGCATCCAATAGCTTA---G--TAA----G 2614 |||||| ||||| |||||||||||||||||||| ||||| |||||| | ||| | Sbjct 2580 GATGAAAATTGCGGGAGAGCGACTTAGGATTGCGTCCAAAAGCTTACTCGCGTAATTAAG 2639 Query 2615 TTGTACAACTGTGACAATAGAATGATTTGTGCTCTC 2650 || ||||||||| ||| || |||||||||||||||| Sbjct 2640 TTCTACAACTGTAACA-TAAAATGATTTGTGCTCTC 2674 > AT5G27010.1 | Symbols: | ARM repeat superfamily protein | chr5:9503315-9507569 REVERSE LENGTH=2592 Length=2592 Score = 2254 bits (1220), Expect = 0.0 Identities = 2186/2628 (83%), Gaps = 163/2628 (6%) Strand=Plus/Plus Query 56 AATTGATTTCAAGAAAATCAAGAGAAAGCTGGGGAGAAAATTACCTCCACCAAAAAATGC 115 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 45 AATCGATTTCAAGAAAATCAAGAGAAAGCTCGGGAGAAAATTACCTCCACCAAATAATGC 104 Query 116 AACTAACACAGAGATTAAATCCAAAGAAATTATAATTCCTGAGCAAAGTGTGGCAGCAGA 175 |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| Sbjct 105 AACTAACACAGAGATTAAATCCAAAGCAATTATACTTCATGAGCAAAGTGTGGCAGCAGA 164 Query 176 AA-AGACTGGCTTTGCTACAAGTAATAAAAACTTGACCTTGGAGGAGCTTCTAGTA-CGA 233 || ||| |||||| ||||||||||| ||| ||||||||| |||||| || | ||| Sbjct 165 AAGAGA-TGGCTTCGCTACAAGTAAGAAAGGTTTGACCTTGCTTGAGCTT-AAGAACCGA 222 Query 234 AGTCGTCATCCCAATGCTAAAGTTCGCAAAAATGCGTTACTTGGTATCCAAGACCTTTTA 293 | | | |||||||||||||||||||||||| |||| |||| ||||||| |||| |||||| Sbjct 223 ACTGGGCATCCCAATGCTAAAGTTCGCAAAGATGCATTACATGGTATCAAAGATCTTTTA 282 Query 294 AAA-AGTCATCCAGTAGAGCTGCAGTCAAAGAAATATACTATCATACA-AT-GTCTTAAG 350 ||| | |||||| | |||||||| |||||| |||||| ||| | |||| || ||| || Sbjct 283 AAACA-TCATCCTGCAGAGCTGCTGTCAAATAAATATGCTA-C-TACACATAAACTT-AG 338 Query 351 -GGACGCATTAATGATGATGATAAGCAAGTGAGAAAAGCTTTTTATGA-ACTATTTGACA 408 | || ||||| ||||||||||||| ||| ||| | | ||||||| | |||| ||| | Sbjct 339 AGAACTCATTACTGATGATGATAAGTTAGTAAGAGACGATTTTTAT-ACACTA-TTG--A 394 Query 409 CTCAGATCTTTCGTT-TTTGTAAACAAGAGGATA-T--CAAGGGACTTATGGTGTCACCT 464 || |||||||| || |||| | ||||||||| | |||||| |||||||| ||| | Sbjct 395 CTGGGATCTTTC-TTGCTTGT--A-AAGAGGATATTAACAAGGGTCTTATGGTTTCAAGT 450 Query 465 TTGATGCTATCCATATTTCA-CGCTATGGCTAATTCAT-TGATTGATGTTCGTTTGGAT- 521 ||||||| || ||||||| | ||||||| |||| |||| | ||||| |||||||| ||| Sbjct 451 TTGATGCCATACATATTT-ACCGCTATGACTAAGTCATCT-ATTGAAGTTCGTTT-GATG 507 Query 522 GCTTTCGCTTTTTTACACCTTGTTGTGGACTACTACCCGCCTTCATTTTCCATGTATCCT 581 |||||| ||||| | ||||||| |||| | ||| ||||| | || ||| | ||| || Sbjct 508 GCTTTCAAATTTTTCCGCCTTGTTTTGGAGTTTTACTCGCCTACCTTCTCCTTATATGCT 567 Query 582 GAAGAGATTCTTGAAAACTACAAGGATATCATTATTCAGAGCAACCATTTTTATGTGCAA 641 ||| ||||||| ||||||||||||| || ||||||| | |||||||||||| | ||| Sbjct 568 GAAAAGATTCTCGAAAACTACAAGG--AT-GTTATTCATAATAACCATTTTTATATACAA 624 Query 642 GATAAAACCAATCTAAAGGTAGCTCTTTCCGGGTTGTCACATTGCCTCTCGCTGTTGCCA 701 ||||||| || || ||||||| ||||| |||||| || ||||| | |||||||||||| Sbjct 625 GATAAAAAGAAGCTTAAGGTAGTTCTTTTGGGGTTGGCAGATTGCTTGTCGCTGTTGCCA 684 Query 702 TGTGATGAGATCCACACCAAATCACAGAAAAA-GCA-TTTCCAACAAAATGAAACCCTAC 759 |||||| ||| | ||| ||||| ||||||| | | ||| ||| ||||||| |||| Sbjct 685 TGTGATCAGAGCGACAATGAATCAAAGAAAAAGGGACTTT--TACAGTATGAAACGCTAC 742 Query 760 TCGCCTATGAGCAAGATGCTGCAAAAGAA---G---GTTTTGCCCACGTCTCTGTGAGAT 813 |||||| ||||||||||||||| |||||| | |||||||||| ||||||| || | Sbjct 743 TCGCCTGTGAGCAAGATGCTGCGAAAGAATGTGTTCGTTTTGCCCATGTCTCTGGGATAC 802 Query 814 TGAAGGAGATTGTTGGAGCCTTAATCAATTGTTTCCAAGATTTCATTCCACTGCTTCGTG 873 ||||||||||||||| || ||||||||||||||||||||||||| ||||| | ||| || Sbjct 803 TGAAGGAGATTGTTGCAGTCTTAATCAATTGTTTCCAAGATTTCCTTCCATTAATTCATG 862 Query 874 CTCCACGAGGATTGGATCCACAATCATTAATTGATTGCGTGCACCATAT-CCTCTGCAGC 932 || | | | || | || | ||||| | |||||||| | | |||||| | || | ||| Sbjct 863 CTTCGCAAAGAATCAATAAAGAATCA-T--TTGATTGCATCCGCCATATACTTC-GTAGC 918 Query 933 ATATGTTATGCCATCAAG--TT---TTC----GCACACTC--AGACACA-T-ACT-GC-A 977 ||| ||||||| |||||| || ||| |||||||| ||||||| | | | || | Sbjct 919 ATAGGTTATGCAATCAAGTTTTCCATTCGTAGGCACACTCAAAGACACACTAAATGGCTA 978 Query 978 ACTGAAGAAGAAGAAGTTACTCTGATGAAACTGGATCACCACATTTCATCAATGTTATCA 1037 || | |||||| ||||||||||| |||||||| ||||| ||||||||||||| Sbjct 979 CCTTCACCTGAAGAAAATACTCTGATGATACTGGATCGTGACATTGCATCAATGTTATCG 1038 Query 1038 AAAAAGTTACTTGCTTCTTTTCCCCTTATTC-CCAAAATCTGCGTTTCTAAAAGGAATGA 1096 ||||||||||||| ||||||||| |||| || | |||| | ||||| | | | Sbjct 1039 AAAAAGTTACTTGGTTCTTTTCCACTTAATCACGAAAA-CAATTTTTCT-----G--T-A 1089 Query 1097 TGAAAGCTACTTTATCCTCAACGGTGTATTGACAGAAATCTTTTTGGAAGTAAGTGAATG 1156 | || | | ||| |||||||||||||||||||||||||||||||||||||| Sbjct 1090 -G--AG--A----A----CAATGGTGTATTGACAGAAATCTTTTTGGAAGTAAGTGAATG 1136 Query 1157 GAGCCACCTTCCTTGTGACCTTTCCTATAGATTTCTGGAATTTATTGAGAATACCCTACT 1216 |||||||||||||||||| |||||| |||||||||| ||||||||||||||| || |||| Sbjct 1137 GAGCCACCTTCCTTGTGATCTTTCCAATAGATTTCTAGAATTTATTGAGAATGCCTTACT 1196 Query 1217 AGGCAAGATCATCAGGAGCATTAGTCCACCTATTCACGAAAAAG-CTTTGCTTGCACTCG 1275 ||| ||||||| ||| |||| |||| | || | | ||| |||| ||||||||| Sbjct 1197 AGGAAAGATCACCAGAAGCAATAGT----C--TT---G-ATAAGACTTTACTTGCACTCT 1246 Query 1276 TGCCTTTTGTTCCAAAACTTACTT-TGAGGGTGGACCGTGATTGGAGAGATAAACTGATG 1334 |||| ||||||||||||||| ||| ||||||||||||||||| |||||||||| || ||| Sbjct 1247 TGCCCTTTGTTCCAAAACTT-CTTCTGAGGGTGGACCGTGATCGGAGAGATAATCTTATG 1305 Query 1335 CAGGCGTTCACTATTA-CTTTAAGCGATTGCAAACCAGAGTCTCCACTTCAATTAGCCTG 1393 ||||| || ||||||| ||| || | ||||||||||||||||| ||||| |||||||||| Sbjct 1306 CAGGCATTTACTATTACCTTCAA-CAATTGCAAACCAGAGTCTTCACTTAAATTAGCCTG 1364 Query 1394 CATTTCAATTGTTAGAGAACTGATTATCCCTAATGGAAATATCCTTTATCCCAATGATCC 1453 ||||||| |||||| ||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1365 CATTTCAGTTGTTAAAGATTTGATTATCCCTAATGGAGATATCCTTTATCCCAATGATCC 1424 Query 1454 AACCGTAGATAACTACCAGCGTGCTTGGGTCAACAAACTTCCGTCACTGCTTCATCAGTT 1513 ||||||| ||||||||||||| |||||||||||||||||||| ||||||||| | ||||| Sbjct 1425 AACCGTAAATAACTACCAGCGCGCTTGGGTCAACAAACTTCCATCACTGCTTAACCAGTT 1484 Query 1514 GGGTGATAAGCATCCCGTTTCTACCCAGGTTGTTTTGCAACTTTTGCTTGACCTTGGGCG 1573 |||||||||||||| || |||||| |||||||||||||||||||||| ||||||| ||| Sbjct 1485 GGGTGATAAGCATCATGTATCTACCAAGGTTGTTTTGCAACTTTTGCTCGACCTTGCGCG 1544 Query 1574 AGTTGGGTTTCTGAAGAATACTTCCCCTGCATTTGAAGAAGGCG-TCAGAAACTTCTTCA 1632 |||||| | ||| |||| |||| || ||||||||||| | | | |||| |||||||| Sbjct 1545 AGTTGGATGTCT---GAATGCTTCTCCAACATTTGAAGAA-GAGATAAGAAGCTTCTTCA 1600 Query 1633 ACCCTTATCAGGGAGAAGGTGATGTGCCTGGTGGACCATTTGCAAGTCTCCCTAGGGAAG 1692 ||||| ||| ||||||||||| ||||| |||||||| |||| ||||||||||||||||| Sbjct 1601 TCCCTTTTCATGGAGAAGGTGAGGTGCCAGGTGGACCTTTTGTAAGTCTCCCTAGGGAAG 1660 Query 1693 CCCAAGAACTTGCTCTCTCTTTCCTTTACTACTTCACCATAGACCATTTCAGCTCCCCTA 1752 |||||| | ||||||| ||||||||||||||||| ||||||| ||||||||||||||| Sbjct 1661 TACAAGAAGTGGCTCTCTGTTTCCTTTACTACTTCATCATAGACAATTTCAGCTCCCCTA 1720 Query 1753 TGCTGAGAGCAATAGTTTCATGCTGTTTATATGAACAACTTAAACCAGCTGTGTTGTATC 1812 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1721 TGCTGAAAGCAATAGTTTCATGCTGTTTATATGAACAACTTGAACCAGCTGTGTTGTATC 1780 Query 1813 GGATAGTGGAAATTCTTCACACTGCGTATAGAGATGGATATATTCAGATTACAGATCATT 1872 ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| Sbjct 1781 GGATAGTGGAAATTCTTCAAACTGCCTATAGAGGTGGATATATTCAGATTACAGATCATT 1840 Query 1873 TTAGCTTCTTCATCACTCTA-ATTGCGCGTTTCAAAGTTGTCCCTCCAGAGA-TG----- 1925 ||||||||||||| || || ||| | ||||||||||||||||| ||| | || Sbjct 1841 TTAGCTTCTTCATTAC-CTTGATTTCACGTTTCAAAGTTGTCCCAG-AGAAACTGAACTC 1898 Query 1926 GG-GATTGAGTGTGATGAGCGGCGGG-AGA------CAACATTCAAAGCACTTACAAACC 1977 || |||||||||||||||| || || | | || |||| ||| |||||||||||| Sbjct 1899 GGCGATTGAGTGTGATGAGAGGAAGGCAAATTGTGGCA-CATTTAAAACACTTACAAACC 1957 Query 1978 TTGTGTGCTCATGTTTGTCAGGAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGAGA 2037 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1958 TTGTGTGCTCATATTTGTCAGAAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGAGA 2017 Query 2038 AAGCTTTTGTCGAACAAATAGGCAAATACTTTATTTTGAAGCCTGCTTTGGACAATGGGT 2097 ||| |||||||||||||||| | | ||| ||||||||| ||||||||||||| Sbjct 2018 AAGTTTTTGTCGAACAAATA---A--T--TTT-----GAAGCCTGCGTTGGACAATGGGT 2065 Query 2098 GTGGC-ATACTCAGGATGATCTGCACGTTGGACTCTAAACCCACCAGACTTTCTGAAAGC 2156 ||| | |||||||||||||||||| |||| ||||||||||| || ||||||||||||| | Sbjct 2066 GTG-CTATACTCAGGATGATCTGCGCGTTAGACTCTAAACCTACAAGACTTTCTGAAATC 2124 Query 2157 AGTGTAACCACTCTAAGTGAATTCTTGCCGGGGTATTTGATGGATATAGTCAATTGTATA 2216 |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct 2125 AGTGTAACCACTCTAAGTGAATTCTTACCGGGATATTTGATCGATATAGTCAATTGTATA 2184 Query 2217 CCAGAAGATAAGGAGAAGTCTTCTTACCTTTACATACAAACATGTCTCTACTATTTAGTA 2276 ||||||||||| |||| | | |||||||||| || ||||||||||| ||||||||| || Sbjct 2185 CCAGAAGATAAAGAGA-GA-T-CTTACCTTTATATGCAAACATGTCTGTACTATTTATTA 2241 Query 2277 CCTTGCTTTTTGCTGTTTGACCGGAGCTCCAAACTCACAGAAGAGGTTCTGAAAAGATTG 2336 ||||||| || ||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 2242 CCTTGCTACTTCCTGTTCGACCGGAGCTCCAAACTCACAGAACAGGTTCTGAAAAGAATG 2301 Query 2337 CGAT-TGATGGTTAGTGAAAACACTAAA-GCGATGCTGGAATCAC--CG-GTCTGGGAGA 2391 |||| | |||||||||||||| |||| || || ||||||| | | | |||||| Sbjct 2302 CGATCT-ATGGTTAGTGAAAATG-TAAAAGC-AT--TGGAATCGGTTCAAGACAGGGAGA 2356 Query 2392 GCAGTCGAAACTTGTTGAATTTGATACAATGCATTGTCTCTGTGATCCTGCTGATGCACA 2451 | ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2357 GTGGTCGAGACTCATTGAATTTGATACAATGCATTGTCTCTGTGATCCTGCTGATGCACA 2416 Query 2452 ACGACGTCAGAGTTAGGAAGATAATATCATCATTCAAGTCAGAGATCGATTTGATTCTGC 2511 |||| |||| ||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 2417 ACGATGTCAAAGTTAGGAAGATAATATCATCATCCAAGTCAGAGATTGATTTGATTCTGC 2476 Query 2512 ACAGCGTTGT-CACGTTGCAGTCCTC--GA-GCATGA-C---A--GTAGAAGGAAAGCAT 2561 | | |||| | ||| ||||||||||| || ||| || | | ||||||||||||||| Sbjct 2477 AGAACGTT-TACACATTGCAGTCCTCACGAAGCACGAGCTTGACTGTAGAAGGAAAGCAT 2535 Query 2562 ATGATGAAGATTGCAGGAGAGCGACTTAGGATTGCATCCAATAGCTTA 2609 |||||||| ||||||| |||||||||||| |||||||||||||||||| Sbjct 2536 ATGATGAAAATTGCAGCAGAGCGACTTAGCATTGCATCCAATAGCTTA 2583 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 132039393976 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5