BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932956 Length=1571 Score E Sequences producing significant alignments: (Bits) Value AT2G26640.1 | Symbols: KCS11 | 3-ketoacyl-CoA synthase 11 | chr... 2281 0.0 > AT2G26640.1 | Symbols: KCS11 | 3-ketoacyl-CoA synthase 11 | chr2:11329870-11331858 FORWARD LENGTH=1823 Length=1823 Score = 2281 bits (1235), Expect = 0.0 Identities = 1441/1543 (93%), Gaps = 4/1543 (0%) Strand=Plus/Plus Query 17 AAGCTATGGATGTTGAGCATAAGAAGCCGTTGATCGAATCATCGGATCGTAACCTTCCTG 76 ||||||||||||| ||||| ||||| ||||| ||||||||||| |||||||| || |||| Sbjct 54 AAGCTATGGATGTAGAGCAAAAGAAACCGTTAATCGAATCATCAGATCGTAATCTACCTG 113 Query 77 ATTTCAAAAAATCAGTGAAGCTTAAGTATGTGAAGCTTGGTTACCATTACCTTATCACAC 136 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 114 ATTTCAAAAAATCAGTGAAGCTTAAATATGTGAAGCTTGGTTACCATTACCTTATCACTC 173 Query 137 ATGGAATGTACCTCTTCCTCTCCCCATTGGTGCTTGTGATCGCTGCGCAGATTTCGACAT 196 ||||||||||||| |||||||||||||| || ||||| |||||||| |||||||| || | Sbjct 174 ATGGAATGTACCTTTTCCTCTCCCCATTAGTACTTGTAATCGCTGCACAGATTTCAACTT 233 Query 197 TCTCTATCAGCGATATTCGCAACCTCTGGGAGCATCTTCAGTACAATCTTATCTCAGTGA 256 ||||| ||| |||| |||| | ||||||||||||||||||||||||||||||||||||| Sbjct 234 TCTCTGTCACCGATCTTCGTAGCCTCTGGGAGCATCTTCAGTACAATCTTATCTCAGTGG 293 Query 257 TTGTTTGTTCTATGCTTCTTGTGTTT-TTAATGACTATTTACTTCATGACTCGGCCGCGT 315 |||||||||||||||| ||||| ||| |||||||||||||||||||||||||| || ||| Sbjct 294 TTGTTTGTTCTATGCTGCTTGT-TTTCTTAATGACTATTTACTTCATGACTCGACCACGT 352 Query 316 CCTGTGTACTTGGTGGACTTCTCGTGCTTTAAACCCGATGAGTCCCGTAAATGCACTAAA 375 ||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||| Sbjct 353 CCTGTCTACTTGGTGAACTTCTCGTGCTTTAAACCCGATGAGTCACGAAAATGCACTAAA 412 Query 376 AAGATCTTTATGGATCGTTCTAAACTCACTGGTTCTTTCACAGAGGAGAATCTTGAGTTC 435 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 413 AAGATCTTTATGGATCGTTCTAAACTCACTGGCTCTTTCACAGAGGAGAATCTTGAGTTC 472 Query 436 CAGCGCAAGATTCTACAACGTTCGGGGCTTGGTGAATCTACTTATTTACCTGAGGCTGTT 495 ||||| ||||||||||||||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 473 CAGCGTAAGATTCTACAACGTTCGGGGCTCGGGGAATCGACTTACTTACCCGAGGCTGTA 532 Query 496 CTCAATGTTCCTCCTAACCCGTGTATGAAAGAAGCTCGAAAAGAGGCGGAGACTGTGATG 555 || |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 533 CTTAATGTTCCGCCTAACCCGTGTATGAAAGAAGCTCGAAAAGAGGCCGAGACTGTTATG 592 Query 556 TTTGGAGCTATTGATGAACTTCTTGCCAAGACGAATGTCAACCCGAAGGATATTGGGATC 615 ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| Sbjct 593 TTTGGAGCTATTGATGAGCTTCTTGCGAAGACGAATGTGAACCCGAAGGATATTGGGATC 652 Query 616 TTGATTGTTAATTGTAGTTTGTTCAACCCGACACCTTCGTTATCTGCTATGGTTGTTAAT 675 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 653 TTGATTGTTAACTGTAGTTTGTTTAACCCGACACCTTCGTTATCTGCTATGGTTGTTAAT 712 Query 676 CACTATAAGCTCCGTGGGAACATACTCAGTTACAACTTGGGAGGAATGGGTTGCAGTGCT 735 |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 713 CACTATAAGCTCCGCGGGAATATACTTAGTTACAACTTGGGAGGAATGGGTTGCAGTGCT 772 Query 736 GGTTTGATCTC-AGTTGATCTTGCTAAACATCTTCTTCACTCCATTCCTAACACTTATGC 794 |||||||| || | |||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 773 GGTTTGATTTCTA-TTGATCTTGCTAAACATCTTCTTCACTCTATTCCCAACACTTATGC 831 Query 795 AATGGTGATTAGCATGGAGAATATTACATTGAACTGGTATTTCGGGAATGACCGCTCGAA 854 |||||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||| Sbjct 832 AATGGTGATTAGTATGGAGAACATTACGTTGAACTGGTATTTCGGGAATGACCGGTCGAA 891 Query 855 GCTTGTTTCCAATTGTCTTTTTAGAATGGGAGGTGCAGCGATTCTTCTCTCTAACAAACG 914 ||||||||| |||||||| ||||||||||||||||||||||||||||| || |||||| | Sbjct 892 GCTTGTTTCTAATTGTCTGTTTAGAATGGGAGGTGCAGCGATTCTTCTTTCGAACAAAAG 951 Query 915 ATGGGACAGAAGAAGATCGAAATACGAGCTTGTTGATACGGTTAGAACCCACAAGGGAGC 974 |||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct 952 ATGGGACAGAAGAAGATCGAAATATGAGCTTGTTGATACGGTTAGGACTCACAAGGGAGC 1011 Query 975 TGATGATAAGTGCTTTGGTTGCATAACTCAAGAAGAGGATTCCGCAAGTAAGATTGGTGT 1034 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1012 TGATGATAAGTGTTTTGGTTGCATAACTCAAGAAGAGGATTCCGCAAGTAAGATTGGTGT 1071 Query 1035 TACCCTGTCGAAAGAACTAATGGCTGTTGCTGGTGATGCTCTAAAGACAAACATCACAAC 1094 |||| ||||||||||||| ||||||||||| |||||||||||||||||||| || || || Sbjct 1072 TACCTTGTCGAAAGAACTTATGGCTGTTGCGGGTGATGCTCTAAAGACAAATATTACGAC 1131 Query 1095 GTTAGGACCACTGGTTCTGCCGACATCTGAACAGCTTCTATTCTTTGCAACATTAGTGGG 1154 |||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| Sbjct 1132 GTTAGGACCACTGGTTTTACCGACATCTGAACAGCTTCTGTTCTTTGCAACGTTAGTGGG 1191 Query 1155 ACGAAAACTCTTCAAGATGAAGATCAAGCCATACATCCCAGACTTCAAACTAGCGTTTGA 1214 | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1192 AAGAAAACTCTTCAAGATGAAGATCAAGCCTTACATCCCAGACTTCAAACTAGCGTTTGA 1251 Query 1215 GCATTTCTGCATCCACGCGGGAGGAAGAGCTGTTCTTGATGAATTGGAGAAGAACTTGAA 1274 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 1252 GCATTTCTGCATCCACGCAGGAGGGAGAGCTGTTCTTGATGAATTGGAGAAGAACTTGAA 1311 Query 1275 ACTCACAGATTGGCACATGGAACCATCAAGAATGACACTCTACCGTTTTGGTAACACATC 1334 ||||||||| ||||| ||||| || || || |||||||||||||||||||||||||| || Sbjct 1312 ACTCACAGAGTGGCATATGGAGCCCTCGAGGATGACACTCTACCGTTTTGGTAACACGTC 1371 Query 1335 CAGTTCTTCTTTGTGGTATGAATTAGCATATAGTGAGGCAAAAGGAAGGATCAAGAAAGG 1394 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1372 CAGTTCTTCTTTGTGGTATGAATTAGCATATAGTGAGGCCAAAGGAAGGATCAAGAAAGG 1431 Query 1395 CGATAGAATTTGGCAGATAGCTTTTGGTTCTGGTTTCAAGTGCAACAGCTCAGTTTGGCG 1454 ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||| | Sbjct 1432 TGATAGAATTTGGCAGATAGCTTTTGGTTCGGGGTTCAAGTGCAACAGCTCGGTTTGGAG 1491 Query 1455 AGCGGTAAGGTCAGTCAACCCTAAAAAAGAGAAGAACCCGTGGATGGATGAAATTCATGA 1514 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1492 AGCGGTAAGGTCGGTAAACCCTAAGAAAGAGAAGAACCCATGGATGGATGAAATTCATGA 1551 Query 1515 GTTCCCAGTTGATGTCCCCAAGGTCTCAACAATCTAGAAACCA 1557 |||||||||||| |||||||||||||| ||||||||||||||| Sbjct 1552 GTTCCCAGTTGAAGTCCCCAAGGTCTCCACAATCTAGAAACCA 1594 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77559842025 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5