BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933010 Length=1274 Score E Sequences producing significant alignments: (Bits) Value AT2G26900.1 | Symbols: | Sodium Bile acid symporter family | c... 1991 0.0 > AT2G26900.1 | Symbols: | Sodium Bile acid symporter family | chr2:11474952-11477944 REVERSE LENGTH=1508 Length=1508 Score = 1991 bits (1078), Expect = 0.0 Identities = 1206/1269 (95%), Gaps = 3/1269 (0%) Strand=Plus/Plus Query 1 CTAAAACCCTTTCGATCACAA-ATGGCTTCCATTTCCAGAATCTTACCAACAGATGGAAG 59 |||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || Sbjct 53 CTAAAACCCTTTTGATCAAAACATGGCTTCCATTTCCAGAATCTTACCAACAGATGGCAG 112 Query 60 ATTAAGTCAATGCAGAATCAACACTTCTTGGGTTCCTACTACGACCAGACCTCAAACCCA 119 |||||||||||||||||||||||| || ||||||||| |||| |||||| ||||||| || Sbjct 113 ATTAAGTCAATGCAGAATCAACACCTCGTGGGTTCCTTCTACAACCAGAACTCAAACTCA 172 Query 120 CTTAGATTATCCCAAGTTGGTTTCTGTTAGTAAGTCTGGAATTAGTTTGAGGATTCAGAA 179 |||||||| ||||||||| |||||||||||||| ||||| || ||||||||||||||||| Sbjct 173 CTTAGATTTTCCCAAGTTAGTTTCTGTTAGTAACTCTGGGATAAGTTTGAGGATTCAGAA 232 Query 180 TAGTAAACCCATTAGCCCTGTCTTTGCTCTTGAAGCAACAACTTCGAGGAGGGTTGCTTG 239 ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||| Sbjct 233 TAGTAAACCTATTAGCCCTGTCTTTGCTCTTGAAGCAACTTCCTCCAGGAGGGTTGTTTG 292 Query 240 TAAAGCTGCTACAGGTGTGTCTGGTGA-TGTACCTGAGAGTACTCCTAAGGAACTTAGTC 298 ||||||||| | |||||||| ||||| | |||||||||||||||||||||||||||||| Sbjct 293 CAAAGCTGCTGCTGGTGTGTCAGGTGACT-TACCTGAGAGTACTCCTAAGGAACTTAGTC 351 Query 299 AGTATGAGAAGATTATTGAACTTTTGACGACCCTTTTTCCTCTTTGGGTTATTTTGGGAA 358 ||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct 352 AGTATGAGAAGATTATTGAGCTTTTGACAACCCTTTTTCCACTTTGGGTTATTTTGGGAA 411 Query 359 CACTTGTTGGCATCTTCAAGCCCTCTTTAGTTACATGGTTGGAAACAGATCTCTTTACTC 418 |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| Sbjct 412 CACTTGTTGGCATCTTCAAGCCATCCTTGGTTACATGGTTGGAAACAGATCTCTTTACTC 471 Query 419 TAGGTCTTGGATTTCTCATGCTTTCTATGGGATTAACTCTTACGTTTGAAGATTTTAGAA 478 |||||||||||||||| |||||||| ||||| || |||||||||||||||||||| |||| Sbjct 472 TAGGTCTTGGATTTCTTATGCTTTCCATGGGTTTGACTCTTACGTTTGAAGATTTCAGAA 531 Query 479 GATGTTTACGTAATCCATGGACGGTGGGTGTTGGTTTTCTTGCTCAATATATGATCAAGC 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 532 GATGTTTACGTAATCCATGGACGGTGGGTGTTGGTTTTCTTGCTCAATATATGATCAAGC 591 Query 539 CAATTCTAGGTTTTCTCATTGCAATGACTCTTAAGCTTTCGGCACCTCTTGCGACTGGTC 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 592 CAATTCTAGGTTTTCTCATTGCAATGACTCTTAAGCTTTCGGCACCTCTTGCGACTGGCC 651 Query 599 TTATCCTAGTCTCATGCTGCCCTGGAGGACAGGCATCTAACGTTGCTACCTACATTTCCA 658 |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| Sbjct 652 TTATCCTAGTCTCATGCTGCCCTGGAGGACAGGCGTCAAACGTTGCTACTTACATTTCCA 711 Query 659 AGGGGAATGTAGCGCTCTCTGTACTCATGACAACGTGTTCAACCATTGGGGCTATTATAA 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 712 AGGGGAATGTAGCGCTCTCTGTACTCATGACAACGTGTTCAACCATTGGGGCTATTATAA 771 Query 719 TGACTCCACTTCTCACTAAGCTTCTTGCTGGCCAGCTTGTTCCCGTTGATGCTGCTGGAC 778 ||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 772 TGACTCCTCTTCTTACTAAGCTTCTTGCTGGTCAGCTTGTTCCCGTTGACGCTGCTGGAC 831 Query 779 TCGCTATTAGTACTTTCCAAGTAGTGTTGGTGCCTACTATAGTTGGAGTTCTGGCTAATG 838 | ||| ||||||| ||||||||||||||||| ||||| ||| ||||||||||||| |||| Sbjct 832 TTGCTCTTAGTACGTTCCAAGTAGTGTTGGTTCCTACCATAATTGGAGTTCTGGCAAATG 891 Query 839 AGTTCTTTCCTAAATTTACGTCTAAGATCATAACAGTGACGCCTCTAATCGGAGTCATTC 898 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 892 AGTTCTTTCCTAAATTTACGTCTAAGATCATAACAGTGACGCCTCTAATCGGAGTCATTC 951 Query 899 TGACCACTCTGCTGTGTGCCAGCCCTATTGGACAAGTTTCAGAGGTTTTGAAAACCCAAG 958 |||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 952 TGACTACTCTGCTCTGTGCCAGCCCTATTGGACAAGTTGCAGATGTTTTGAAAACCCAAG 1011 Query 959 GAGCTCAACTTATACTCCCGGTGGCACTCCTTCATGCTGCAGCCTTTGCTATTGGCTATT 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1012 GAGCTCAACTTATACTCCCGGTGGCACTCCTTCATGCTGCAGCCTTTGCTATTGGCTATT 1071 Query 1019 GGATTTCAAAGTTTTCTTTCGGCGAGTCCACTTCGCGTACCATATCTATAGAATGTGGCA 1078 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 1072 GGATTTCAAAGTTTTCTTTCGGCGAGTCCACTTCGCGTACCATTTCTATAGAATGTGGAA 1131 Query 1079 TGCAAAGTTCAGCGCTCGGGTTCTTACTTGCACAAAAGCATTTCACAAACCCTCTAGTTG 1138 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1132 TGCAAAGTTCAGCGCTCGGGTTCTTGCTTGCACAAAAGCATTTCACAAACCCTCTAGTTG 1191 Query 1139 CTGTTCCTTCCGCAGTCAGTGTTGTCTGTATGGCGCTTGGCGGGAGCGGCCTGGCCGTGT 1198 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1192 CTGTTCCTTCTGCAGTCAGTGTTGTCTGTATGGCGCTTGGCGGGAGCGGCCTGGCCGTGT 1251 Query 1199 TCTGGAGAAACCTACCAATTCCGGCAGATGACAAGGATGACTTCAAAGAGTAAATGACGT 1258 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 1252 TCTGGAGAAACCTACCGATTCCGGCAGATGACAAGGATGACTTCAAAGAGTAAATGAAGT 1311 Query 1259 AGGAAAGGC 1267 ||||||||| Sbjct 1312 AGGAAAGGC 1320 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62650280160 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5