BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933024 Length=497 Score E Sequences producing significant alignments: (Bits) Value AT2G26975.1 | Symbols: | Ctr copper transporter family | chr2:... 579 1e-164 > AT2G26975.1 | Symbols: | Ctr copper transporter family | chr2:11512861-11513553 FORWARD LENGTH=693 Length=693 Score = 579 bits (313), Expect = 1e-164 Identities = 416/463 (90%), Gaps = 17/463 (4%) Strand=Plus/Plus Query 3 TCAGAAACTTATCATACAATGGATCATGGTAACATGCATAACATGCCACCACCACTATCA 62 |||||||||||||||| |||||||||| | | ||||||||||||| | |||| Sbjct 114 TCAGAAACTTATCATATAATGGATCAT-G------G--TAACATGCCACCA--TC-ATCA 161 Query 63 CCATCATCATCAATGGCGAATCAAACCAATTCCGACATGATCGTGATGCATATGACCTTC 122 | |||||||||||| ||||| ||||||||| |||||||| ||||||||||||| ||| Sbjct 162 -C--CATCATCAATGGTAAATCATACCAATTCCAACATGATCATGATGCATATGACTTTC 218 Query 123 TTCTGGGGCAAGAACACGGAGATCCTCTTCTCCGGCTGGCCCGGGACAAGTTC-CCGCAT 181 |||||||| |||||||||||||| |||||||||||||||||||||||||| || | |||| Sbjct 219 TTCTGGGGAAAGAACACGGAGATACTCTTCTCCGGCTGGCCCGGGACAAG-TCTCGGCAT 277 Query 182 GTATGCTCTATGTCTCATCGTCGTCTTCCTCCTCGCTGTAATCACCGAGTGGCTTGCCCA 241 ||| | ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| Sbjct 278 GTACGTTCTATGTCTCATCGTCGTCTTCCTCCTTGCTGTTATCGTCGAGTGGCTTGCCCA 337 Query 242 TTCTTCGATCCTTCGTGGCCGTGGCTCCACCAGCCGCGCCGCGGGGCTCGCTCAGACCGC 301 |||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||| Sbjct 338 TTCTTCGATCCTTCGTGGACGTGGCTCCACTAGCCGCGCCAAGGGGCTCGTTCAGACCGC 397 Query 302 CGTGTACACACTCAAGACAGGCCTCGCGTATCTCGTGATGCTGGCCGTTATGTCCTTTAA 361 || |||||||||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct 398 AGTCTACACACTCAAGACAGGCCTTGCTTATCTCGTGATGCTCGCCGTTATGTCCTTTAA 457 Query 362 CGGCGGTGTTTTCATTGTCGCTATCGCCGGATTCGCCGTTGGTTTCATGCTCTTCGGAAG 421 ||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 458 CGGTGGAGTTTTCATTGTCGCTATCGCCGGATTCGCCGTGGGTTTCATGCTCTTCGGAAG 517 Query 422 CACTGCTTTCAAGAACCCCTCTGATGACGAGAAACCCTTCGAA 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 518 CACTGCTTTCAAGAACCCCTCTGATGACGAGAAACCCTTCGAA 560 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23710517384 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5