BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933276 Length=1201 Score E Sequences producing significant alignments: (Bits) Value AT2G27680.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 1808 0.0 > AT2G27680.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr2:11803811-11806013 REVERSE LENGTH=1373 Length=1373 Score = 1808 bits (979), Expect = 0.0 Identities = 1130/1203 (94%), Gaps = 10/1203 (1%) Strand=Plus/Plus Query 1 AGAAGCGAGAGAGTGAGGCCATGCCTGTGTCCGTACATTCCGTTATCGCCACGAACCTAG 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 29 AGAAGCGACAGAGTGAGGCCATGCCTGTGTCCGTACATTCCGTTATCGCCACGAACCTAG 88 Query 61 CGACTACAGTATCATCGAATCGGTTTCACCGGAATGTTTCTCGCCGTCTAATC-AGCTCA 119 | |||||| |||||||||| || |||||||||||||||||||| || | | ||| Sbjct 89 CCACTACACTATCATCGAA-----TT-ACCGGAATGTTTCTCGCCGTAGAA-CTATCTCC 141 Query 120 AGCTCCGTGAAATGCTCGGTGGAGACGAAGGAAGCTGATCGGTGGGTGAAGCTGAAGAAC 179 | ||| ||||| || |||||||||| | ||| |||||||||| |||||| ||||||||| Sbjct 142 ACCTCTGTGAATTGTTCGGTGGAGATTACGGAGGCTGATCGGTCGGTGAAACTGAAGAAC 201 Query 180 GGTAACGATTCACTGGAGATATGCAGAGTTCTTAATGGAATGTGGCAAACGAGTGGAGGA 239 || ||||||||||||||||||||||||||||| || || |||||||||||||| |||||| Sbjct 202 GGGAACGATTCACTGGAGATATGCAGAGTTCTCAACGGGATGTGGCAAACGAGCGGAGGA 261 Query 240 TGGGGGAGGATTGACCGAAACGACGCCGTTGATGCAATGCTTCGACACGCTGATGCTGGT 299 ||||||| |||||| |||||||||||||||||| |||||||||| |||| ||||||||| Sbjct 262 TGGGGGAAGATTGATCGAAACGACGCCGTTGATTCAATGCTTCGTTACGCCGATGCTGGT 321 Query 300 CTCTCTACTTTCGATATGGCTGATCATTATGGTCCTGCTGAAGATCTTTACGGCATTTTT 359 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 322 CTCTCTACTTTCGATATGGCTGATCACTATGGTCCTGCTGAAGATCTTTACGGTATTTTT 381 Query 360 ATCAATAGAGTTCGTCGAGAGCGTCCACCGGAGTATTTGGAGAAGATTAAAGGTTTGACA 419 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 382 ATCAATAGAGTTCGTCGAGAGCGTCCACCGGAGTACTTGGAGAAGATTAAAGGTTTGACA 441 Query 420 AAATGGGTGCCTCCTCCAATAAAGATGACAAGTAGCTATGTTCGTCAGAACATTGATATA 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 442 AAATGGGTGCCTCCTCCAATAAAGATGACAAGTAGCTATGTTCGTCAGAACATCGATATA 501 Query 480 TCGCGGAAGAGAATGGATGTGGCTGCTCTTGATATGCTTCAGTTTCATTGGTGGGATTAT 539 ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 502 TCGAGGAAGAGAATGGATGTGGCTGCTCTTGATATGCTTCAGTTTCACTGGTGGGATTAT 561 Query 540 GCGAATGACGGCTATCTTGATGCACTGAAACATCTCACTGACCTGAAAGAAGAAGGGAAA 599 |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 562 GCGAATGACGGCTATCTTGATGCACTGAAACATCTCACAGACTTGAAGGAAGAAGGGAAA 621 Query 600 ATCAAGACTGTTGCTTTGACAAATTTTGATACAGAGAGACTTCAAAAAATCTTAGAGAAT 659 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 622 ATCAAGACTGTTGCTTTGACTAATTTTGATACAGAGAGACTTCAGAAAATCTTAGAGAAT 681 Query 660 GGAATCCCGGTTGTCAGCAATCAAGTGCAACACTCTATTGTAGATATGCGTCCTCAACAG 719 |||||||| || || |||||||| ||||||||||| || ||||| ||||||||||||||| Sbjct 682 GGAATCCCTGTCGTTAGCAATCAGGTGCAACACTCCATCGTAGACATGCGTCCTCAACAG 741 Query 720 AGAATGGCTCAGCTTTGCGAGCTTACAGGCGTCAAACTTATAACATATGGGACAGTAATG 779 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 742 AGAATGGCTCAGCTTTGCGAGCTTACAGGGGTCAAACTTATAACATATGGGACAGTTATG 801 Query 780 GGTGGTCTCCTGTCAGAGAAGTTTCTTGATACCAATCTAACAATCCCTTTTGCTGGCCCT 839 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 802 GGTGGTCTCTTGTCAGAGAAGTTTCTTGATACCAATCTAACAATCCCTTTTGCTGGCCCT 861 Query 840 CGCTTGAATACTCCTTCTCTGCAAAAGTACAAAAGGATGGTTGATGCATGGGGAGGGTGG 899 |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 862 CGCTTGAATACTCCATCTCTCCAAAAATACAAAAGGATGGTTGATGCATGGGGAGGGTGG 921 Query 900 AATCTATTTCAAGGTCTACTTCGAACAATGAAGAGCATATCCACAAAACATGGAGTCTCT 959 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 922 AATCTATTTCAAGGTTTACTTCGAACAATGAAGACCATATCCACAAAACATGGAGTCTCT 981 Query 960 ATACCAACAGTGGCTGTGAGATATGTACTAGATCAGCAAGGAGTTGGTGGATCAATGATT 1019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 982 ATACCAACAGTGGCTGTGAGATATGTACTAGATCAGCAAGGAGTTGGTGGATCAATGATT 1041 Query 1020 GGGGTGAGGCTCGGGTTAGCGGAACACATACAAGACGCAAACGCTATATTCTCATTGGTA 1079 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1042 GGAGTGAGACTCGGGTTAGCGGAACACATACAAGACGCAAATGCTATATTCTCATTGGTA 1101 Query 1080 TTGGATGAAGAAGATGTGAATAGCATTCAAGAGGTTACCAAGAAAGGTAAAAATCTTCTC 1139 ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||| Sbjct 1102 TTGGATGAAGAAGATGTTAATAGCATACAAGAGGTTACCAAGAAAGGTAAAGATCTTCTC 1161 Query 1140 CAAGTGATTGGTGATTGTGGAGACGAATACCGACGTATATGATGTGGTAG-TATATACTC 1198 |||||||||||||| || |||||||||||||||||||||||||||| ||| ||| ||||| Sbjct 1162 CAAGTGATTGGTGACTGCGGAGACGAATACCGACGTATATGATGTG-TAGCTATGTACTC 1220 Query 1199 TAT 1201 ||| Sbjct 1221 TAT 1223 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58985640375 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5