BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933291 Length=536 Score E Sequences producing significant alignments: (Bits) Value AT2G27580.1 | Symbols: | A20/AN1-like zinc finger family prote... 614 3e-175 > AT2G27580.1 | Symbols: | A20/AN1-like zinc finger family protein | chr2:11776411-11777529 REVERSE LENGTH=1002 Length=1002 Score = 614 bits (332), Expect = 3e-175 Identities = 466/527 (88%), Gaps = 23/527 (4%) Strand=Plus/Plus Query 22 GTTATGGCGGAAGAACACAGGCTTCAAGAACCACGATTATGTGCTAAGAATTGTGGTTTC 81 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct 279 GTTATGGCGGAAGAACACAGACTTCAAGAACCACGATTATGTGCTAACAATTGTGGCTTC 338 Query 82 TTTGGAAGCACCGCTACACAAAATCTTTGTTCTAAATG-TTTCAGAGATGTTCAACATCA 140 || |||||||| |||||||||||||| ||||| ||||| |||| ||||| |||||||||| Sbjct 339 TTCGGAAGCACAGCTACACAAAATCTCTGTTCCAAATGTTTTC-GAGATCTTCAACATCA 397 Query 141 AGAACAAAACTCTTCCACCGCTAAACACGCTCTTAACCAAACCTTAGCCGCCGTTTCTAC 200 ||||||||||||||||||||| ||||| ||||||| |||| |||||||||||| | Sbjct 398 AGAACAAAACTCTTCCACCGCCAAACATGCTCTTACCCAATCCTTAGCCGCCG----T-- 451 Query 201 AGGTGGCGGTACCGCGTCCTCCTCCGTAT---CA---CCACCGCCTCAAGCTGATTCGAA 254 ||||| | | ||||| |||||||| | || || ||||||| |||||||||||| Sbjct 452 ---TGGCGCTGCTGCGTCTTCCTCCGTGTCGCCACCGCCTCCGCCTCCAGCTGATTCGAA 508 Query 255 AGAAATCGTCGAAGCGAATTCGA-AGAAACGAGCGGCGGCTGAGGAGGAGGAAGCGG--C 311 ||||||||| |||||||| || | ||||||||||||||||||| |||||| |||| Sbjct 509 AGAAATCGTTGAAGCGAAATC-AGAGAAACGAGCGGCGGCTGAACCGGAGGAGGCGGATG 567 Query 312 G-CCGTCGCAAGATCCGAAGCGGTGTTTGACTTGTCGGCGGCGGGTGGGAATAACGGGGT 370 | ||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 568 GTCCGCCGCAAGATCCGAAGCGGTGTTTGACTTGTCGGCGGCGCGTGGGAATCACGGGGT 627 Query 371 TTCGGTGTAGGTGTGGCTTCGTTTTCTGTGGGACACATAGGTACGCGGAGCTGCATGAAT 430 |||||||||||||||| ||||||||||| ||||| |||||||||||||||| ||||||| Sbjct 628 TTCGGTGTAGGTGTGGTTTCGTTTTCTGCGGGACGCATAGGTACGCGGAGCAACATGAAT 687 Query 431 GTTCGTTTGATTTCAAGAGGATTGGGAAGGATAAGATCGCTAAGGCGAATCCGATTGTGA 490 ||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||| Sbjct 688 GTTCGTTTGATTTCAAGCGGATGGGGAAGGATAAGATCGCTAAAGCGAATCCGATTGTGA 747 Query 491 AAGCTGATAAGCTTGAGAAGATTTGAgtttgttgtttgttgtt-gtt 536 |||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct 748 AAGCTGATAAGCTTGAGAAGATTTGACTTTGTTGTTTGTTGTTTGTT 794 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25669649117 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5