BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933488 Length=374 Score E Sequences producing significant alignments: (Bits) Value AT2G30000.1 | Symbols: | PHF5-like protein | chr2:12803853-128... 531 2e-150 > AT2G30000.1 | Symbols: | PHF5-like protein | chr2:12803853-12804977 REVERSE LENGTH=642 Length=642 Score = 531 bits (287), Expect = 2e-150 Identities = 336/360 (93%), Gaps = 2/360 (1%) Strand=Plus/Plus Query 6 CACTGTTTTGGT-AGCTATGGCGAAGCATCACCCTGATTTGATCATGTGCAGGAAACAAC 64 ||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 104 CACTGTTCCAGTAAGCCATGGCGAAGCATCACCCTGATTTGATCATGTGCCGGAAACAAC 163 Query 65 CCGGAATTGCCATTGGACGACTGTGTGAGAAATGCGACGGGAAATGTGTGATTTGTGATT 124 |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 164 CCGGAATTGCTATTGGACGACTGTGTGAGAAATGCGATGGGAAATGCGTGATTTGTGATT 223 Query 125 CTTATGTGCGTCCATGTACTCTGGTACGTATTTGTGATGAATGCAACTACGGGTCATTCC 184 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 224 CTTATGTGCGTCCGTGTACTCTAGTACGTATTTGTGATGAATGCAACTACGGGTCATTCC 283 Query 185 AAGGTCGGTGTGTGATATGCGGAGGGGTTGGAATCTCCGATGCTTATTACTGTAAAGAGT 244 ||||||||||||| |||||||| || ||||||||||| |||||||||||||| ||||||| Sbjct 284 AAGGTCGGTGTGTTATATGCGGTGGCGTTGGAATCTCAGATGCTTATTACTGCAAAGAGT 343 Query 245 GTACGCAACAAGAGAAAGACAGAGATGGTTGCCCCAAGATTGTTAACCTTGGGAGTGCGA 304 |||| || || ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 344 GTACACAGCAGGAGAAAGACAGAGATGGTTGCCCCAAGATTGTTAACCTTGGCAGTGCGA 403 Query 305 AAACCGATCTGTTCTATGAACGTAAGAAATACGGATTCAAAAAACGATGATATTT-GGTA 363 |||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct 404 AAACCGATCTCTTCTATGAACGCAAGAAATACGGATTCAAAAAACGATGATAGTTCGGTA 463 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17593712150 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5