BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934124 Length=1774 Score E Sequences producing significant alignments: (Bits) Value AT2G35155.1 | Symbols: | Trypsin family protein | chr2:1481899... 2994 0.0 > AT2G35155.1 | Symbols: | Trypsin family protein | chr2:14818994-14821965 REVERSE LENGTH=2263 Length=2263 Score = 2994 bits (1621), Expect = 0.0 Identities = 1730/1782 (97%), Gaps = 10/1782 (1%) Strand=Plus/Plus Query 1 AAGTAGCATTGTAAAAGGAGATGAATTTGGGAGCTTGGGGTCAGAGATTCATCCAAGCAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 289 AAGTAGCATTGTAAAAGGAGATGAATTTGGGAGCTTGGGGTCAGAGATTCATCCAAGCAG 348 Query 61 CAGCTTCTTCTGAATCCGAGGATTCTGCTTTGGATTTGGAGAGAAATCATCACTGCAATC 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 349 CAGCTTCTTCTGAATCGGAGGATTCTGCTTTGGATTTGGAGAGAAATCATCACTGCAATC 408 Query 121 ACTTGAGTCTTCCGTCATCTTCAACTCCATCTCCTCTTCAGCCATTCACACTCAACATCC 180 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 409 ACTTGAGTCTTCCATCATCTTCAAGTCCATCTCCTCTTCAGCCATTCACACTCAACATCC 468 Query 181 AACATGCAGAGAGCAATGCCCCTTACTTCTCGTGGCCTACTCTCAGTAGGCTTAACGATG 240 ||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct 469 AACATGCTGAGAGCAATGCCCCTTACTTCTCCTGGCCTACGCTCAGCAGGCTTAACGACA 528 Query 241 CTGTTGAAGACCGAGCTAACTACTTTGGTAATCTTCAGAAAGGGGTTTTACCAGAAACTG 300 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 529 CTGTTGAAGACCGAGCTAACTACTTTGGTAATCTCCAGAAAGGGGTTTTACCAGAAACTG 588 Query 301 TTGGCAGGTTGCCATCAGGACAACAAGCCACTACTTTGCTTGAGCTCATGACCATCAGAG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 589 TTGGCAGGTTGCCATCAGGACAACAAGCCACTACTTTGCTTGAGCTCATGACCATCAGAG 648 Query 361 CGTTTCATAGTAAAATCCTGCGCCGCTTCAGCCTTGGTACTGCGGTTGGGTTTCGGATCA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 649 CGTTTCATAGTAAAATCCTGCGCCGCTTCAGCCTTGGTACTGCGGTTGGGTTTCGGATCA 708 Query 421 GCCGTGGTGTTCTAACGAATGTTCCAGCAATACTTGTCTTTGTTGCTAGGAAAGTCCATA 480 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 709 GCCGTGGTGTTCTAACGAATGTTCCAGCGATACTTGTCTTTGTTGCTAGGAAAGTCCATA 768 Query 481 GGCAATGGCTAAATCCAATGCAGTGCCTTCCTTCTGCCCTTGAGGGCCCTGGAGGGGTAT 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 769 GGCAATGGCTAAATCCAATGCAGTGCCTTCCTTCTGCCCTTGAGGGTCCTGGAGGGGTAT 828 Query 541 GGTGCGATGTCGATGTTGTGGAATTCCAATATTACGGTGCTCCTGCTGCAACACCAAAGG 600 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 829 GGTGCGATGTAGATGTTGTGGAATTCCAATACTACGGTGCTCCTGCTGCAACACCAAAGG 888 Query 601 AACAAGTTTATAATGAACTTGTAGATGGTTTGAGAGGAAGTGATCCCTGCATTGGCTCTG 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 889 AACAAGTTTATAATGAACTTGTAGATGGTTTGAGAGGAAGTGATCCCTGCATTGGCTCTG 948 Query 661 GTTCTCAGGTTGCAAGCCAAGAAACGTATGGAACCTTGGGAGCCATAGTGAAAAGCAGAA 720 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 949 GTTCTCAGGTTGCAAGCCAAGAAACATATGGAACCTTGGGAGCTATAGTGAAAAGCAGAA 1008 Query 721 CAGGTAACCATCAGGTTGGATTTC-TTACCAATCGGCATGTCGCAGTTGATTTGGATTAT 779 |||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 1009 CAGGTAACCACCAGGTTGG-TTTCCTTACCAATCGGCATGTCGCAGTTGATTTGGATTAT 1067 Query 780 CCAAGCCAGAAAATGTTTCATCCTTTACCTCCAAGCCTTGGACCGGGTGTCTACCTCGGT 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1068 CCAAGCCAGAAAATGTTTCATCCTTTACCTCCAAGCCTTGGACCGGGTGTCTACCTCGGT 1127 Query 840 GCAGTTGAGAGAGCAACATCGTTTATCACAGATGATCAGTGGTACGGCATATTTGCTGGC 899 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1128 GCAGTTGAGAGAGCAACATCGTTTATCACAGATGATCAGTGGTATGGCATATTTGCTGGC 1187 Query 900 ACAAATCCAGAAACATTTGTAAGAGCGGACGGTGCCTTTATTCCTTTTGCAGAAGATTTC 959 |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1188 ACAAATCCAGAAACGTTTGTGAGAGCGGATGGTGCCTTTATTCCTTTTGCAGAAGATTTC 1247 Query 960 AACACGAGCAATGTAACTACCGT-GATAAAGGGCATTGGTGAAATAGGAAATGTACACGT 1018 |||||||||||||||||||| || |||||||||||||||||| |||||| |||| ||||| Sbjct 1248 AACACGAGCAATGTAACTAC-GTTGATAAAGGGCATTGGTGAGATAGGAGATGTGCACGT 1306 Query 1019 TATAGACTTGCAATCCCCAATTGATAGCCTTATTGGGAAACAAGTTGTCAAAGTTGGAAG 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1307 TATAGACTTGCAATCCCCAATTGATAGCCTTATTGGGAAACAAGTTGTCAAAGTTGGAAG 1366 Query 1079 AAGCTCTGGATATACCACCGGAACCATAATGGCTTATGCTTTGGAATACAACGACGAGAA 1138 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1367 AAGCTCTGGATATACCACCGGAACCATAATGGCTTATGCATTGGAATACAACGACGAGAA 1426 Query 1139 AGGGATCTGTTTCCTCACGGATTTTCTGGTCATTGGCGAAAACCAGCAAACTTTTGACCT 1198 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1427 AGGGATCTGTTTCCTCACGGATTTTCTGGTCATTGGTGAAAACCAGCAAACTTTTGACCT 1486 Query 1199 TGAAGGTGACAGTGGAAGCCTAATACTCTTAACGGGTCCAAATGGTCAGAAGCCAAGACC 1258 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1487 TGAAGGTGACAGTGGAAGCCTAATACTCTTAACGGGTCCAAATGGTCAGAAGCCACGACC 1546 Query 1259 AGTTGGGATCATTTGGGGAGGGACAGCCAACCGCGGAAGACTTAAACTCATAGCTGGTCA 1318 ||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||| Sbjct 1547 AGTTGGGATCATTTGGGGAGGAACAGCCAACCGAGGAAGACTTAAACTAATAGCCGGTCA 1606 Query 1319 AGAACCCGAGAACTGGACAAGCGGAGTTGATCTTGGTCGCCTTTTGGATCTCTTGGAGCT 1378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1607 AGAACCCGAGAACTGGACAAGCGGAGTTGATCTTGGTCGCCTTTTGGATCTCTTGGAGCT 1666 Query 1379 TGATCTCATCACATCAAACCATGAGCTTGAAGCAGCAGCA-C-G-A-GA-AC-AAAGAAA 1432 ||||||||||||||| |||||||| ||||||||||||||| | | | || | ||||||| Sbjct 1667 TGATCTCATCACATCCAACCATGAACTTGAAGCAGCAGCAGCAGCACGAGAAGAAAGAAA 1726 Query 1433 CACTTCGGTTACAGCCCTCGATTCAACGGTTAGCCAGTCATCCCCGCCGGACCCGGTTCC 1492 |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct 1727 CACTTCGGTTACAGCCCTTGATTCAACCGTTAGCCAGTCATCCCCGCCTGACCCGGTTCC 1786 Query 1493 ATCAGGAGACAAACAAGATGAGAGCTTTGAGCCATTTATTCCGCCTGAGTTTCATATAGA 1552 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1787 ATCAGGAGACAAACAAGATGAGAGCTTTGAGCCATTTATTCCGCCTGAGTTCCATATAGA 1846 Query 1553 AGAAGCAATCAAACCAACACCTGAAGTAGAGGAACATATCTTCATTGCTCCTATATCGGT 1612 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 1847 AGAAGCAATCAAACCAACACTTGAAGTTGAGGAACATATCTTCATTGCTCCTATATCGGT 1906 Query 1613 TAACGAGTCTACTTCCGCCATTAAAGGGCAAGAGAAACCCAAATTGGATAATCTCATGGC 1672 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1907 TAACGAGTCTACTTCCGCCATTAAAGGGCAAGAGATACCCAAATTGGATAATCTCATGGC 1966 Query 1673 TTTAAAGAACAGTTCCGAAGAAGAGGTTAACGTATCGTTGCATCTAGGTGAGCCCAAACT 1732 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1967 TTTAAAGAACAGTTCCGAAGAAGAGGTTAACATATCGTTGCATCTAGGTGAGCCCAAACT 2026 Query 1733 AAAGAAGCCAAAGtttttttAGCTGAACCAGGAAATTGATCT 1774 |||||||||||||||||||||||||||||||||||||||||| Sbjct 2027 AAAGAAGCCAAAGTTTTTTTAGCTGAACCAGGAAATTGATCT 2068 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87750552660 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5