BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934168 Length=1170 Score E Sequences producing significant alignments: (Bits) Value AT2G35490.1 | Symbols: | Plastid-lipid associated protein PAP ... 1652 0.0 > AT2G35490.1 | Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr2:14912144-14913877 REVERSE LENGTH=1376 Length=1376 Score = 1652 bits (894), Expect = 0.0 Identities = 1083/1173 (92%), Gaps = 17/1173 (1%) Strand=Plus/Plus Query 8 ACACAGAGATCTGCCATGGTTACGCTCTTCACC-AC-CTC-TCGTGCTTCCCTCCTCT-T 63 ||||| ||||| ||||||| ||||||||||||| | ||| || | |||| ||||||| | Sbjct 66 ACACAAAGATCGGCCATGGCTACGCTCTTCACCGTCGCTCGTCCTTCTTCACTCCTCTAT 125 Query 64 CGCTTCCTCTGTAAA-CACAAGCAAGAGCTTCTCTCCTTCTATCTCCCTAAAACCCAATT 122 | |||||| |||| | ||||||||| |||||||||||||||||||||||||| || | Sbjct 126 -GTTTCCTCCATAAATC-CAAGCAAGACCTTCTCTCCTTCTATCTCCCTAAAACTTAACT 183 Query 123 CTCTCTCTTTCTCTTTTGGTCATCGTCCC-AGACCACTCCGGTTTTCTAAAATCCGATCT 181 |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct 184 CTCTCTCTTTCTCTTTTGGTTATCGTCCCAAG-CCACTCCGGTTTTCTAAAATCCGATCT 242 Query 182 TCTCTGCCCTCGGAGTCCGAATCCGAATCCGACCTAGATGCGTCT-AATGTTACAGATGA 240 |||||||||||||| || ||||| ||||||||||||||||||||| | ||||||||||| Sbjct 243 TCTCTGCCCTCGGAATCTGAATCGGAATCCGACCTAGATGCGTCTGCA-GTTACAGATGA 301 Query 241 ATGGGGTGAGAAACCTGGAGATGCAAGTGAGCCCCAATCTCAGCCGGAT-ATTTCTCTGG 299 |||||||||||||||||||||||||| ||||||| | |||||||| ||| || | | | Sbjct 302 ATGGGGTGAGAAACCTGGAGATGCAAATGAGCCCGACTCTCAGCCAGATAATGTGAC-CG 360 Query 300 TGAATGTGACTACGGACGAATGGGGAGAGAAATCTGGACCCGAATC-TGAGGAATCCGGG 358 ||||||||| ||||||||||||||| |||||||| ||||||||| | ||||||||||||| Sbjct 361 TGAATGTGATTACGGACGAATGGGGCGAGAAATCCGGACCCGAA-CTTGAGGAATCCGGG 419 Query 359 ACCCGGTTTACGGAATCGGATCCTCCAAGGAACGAGGACGAGT-GGGAGGAAGAAATTGG 417 |||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||| Sbjct 420 ACCCGGTTTATGGAATCGGATCCTCCAAGGAACGAAGACGAGTGGGGAGG-AGAAATTGG 478 Query 418 AAAAGAAGTTGAAATCGACGCCGGAAATGGAAGTGCGGTGTCTGACCCGACTTGGGAGCT 477 | |||| |||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 479 AGGAGAAACTGAAGCCGACGCTGGAAATGGAAGTGCGGTGTCTGACCCGACTTGGGAGCT 538 Query 478 GAAAAGGTGTTTGGCGGATTCTGTGTACGGAACTGAATTAGGTTTCCGGGCTGGCTCAGA 537 ||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| Sbjct 539 GAAAAGGTGTTTGGCGGATTCGGTGTACGGAACTGAATTAGGTTTCAAAGCTGGGTCAGA 598 Query 538 TGTTCGAGCGGAGGTGTTAGAGCTTGTGAATCAATTGGAAGCTCTGAATCCTACGCCGGC 597 || ||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||| Sbjct 599 AGTCCGAGCGGAGGTTTTGGAGCTTGTGAATCAACTGGAAGCTCTGAATCCTACTCCGGC 658 Query 598 TCCGGTAGAGAATCCGGAGCTTCTCGACGGCAACTGGGTTTTGCTGTACACTGCTTTCTC 657 |||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 659 TCCGTTAGAGAATCCAGAACTTCTCGACGGCAACTGGGTTTTGCTGTACACTGCTTTCTC 718 Query 658 TGAGTTGATTCCTCTACTAGCTGCGGGTTCGACACCTTTGTTGAAAGTGAAAAGCATAAG 717 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 719 TGAGTTGATTCCTCTACTAGCTGCGGGTTCGACACCTTTGTTGAAAGTTAAAAGCATAAG 778 Query 718 TCAGTCGATAGACACAAACAATCTCACTATCGACAACTCCACTACACTCTCCAGCCCTTT 777 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 779 TCAGTCAATAGACACAAACAATCTCATTATCGACAACTCCACTACACTCTCCAGCCCTTT 838 Query 778 TGCAGACTTCTCATTCAGTGCTACTGCTTCATTTGAAGTTCGAAGCCCTTCAAGAATTGA 837 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 839 TGCAGACTTCTCCTTCAGTGCTACTGCTTCATTTGAAGTTCGAAGCCCTTCAAGAATTGA 898 Query 838 GGTTTCTTTCAAAGAAGGTACGCTAAAACCCCCGGAGATCAAATCAAGTGTTGATCTCCC 897 |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| Sbjct 899 GGTTTCTTTCAAAGAAGGCACGCTAAAACCCCCGGTGATCAAATCAAGTGTAGATCTCCC 958 Query 898 AGAGAGTGTGGGCGTCTTTGGGCAGCAGATTAGCCTTTCGTTATTGAAGCAATCTTTGAA 957 |||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct 959 AGAGAGTGTGGGCGTCTTTGGGCAGCAGATTAGCCTTTCGTTGTTAAAGCAGTCTTTGAA 1018 Query 958 CCCTTTACAAGATGTGGCAGCAAACATTTCACGGGGACTCTCTGGTCAGCCACCTCTTAA 1017 ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 1019 CCCCTTACAAGATGTGGCAGCAAACATTTCACGGGCACTCTCTGGTCAGCCACCTCTCAA 1078 Query 1018 GCTTCCGTTTCCAGGAAACCGAGGCAGCTCTTGGCTCTTGACCACTTATCTCGACAAGGA 1077 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1079 GCTTCCGTTTCCAGGAAACCGAGGCAGCTCTTGGCTCTTGACCACTTATCTCGACAAGGA 1138 Query 1078 TCTCAGGATTTCAAGAGGAGACGGTGGGCTTTTCGTACTTGCCAGAGAAGGAAGCTCTCT 1137 |||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct 1139 TCTCAGGATTTCTAGAGGAGATGGTGGCCTTTTCGTGCTTGCCAGAGAAGGAAGCTCTCT 1198 Query 1138 GCTTGAGCTCTGATATATTTGAGAAGGTATATA 1170 ||||||||||||| |||||||| || ||||||| Sbjct 1199 GCTTGAGCTCTGAAATATTTGATAAAGTATATA 1231 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57429423480 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5