BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934176 Length=510 Score E Sequences producing significant alignments: (Bits) Value AT2G35585.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 739 0.0 > AT2G35585.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14936666-14937964 FORWARD LENGTH=785 Length=785 Score = 739 bits (400), Expect = 0.0 Identities = 478/514 (93%), Gaps = 11/514 (2%) Strand=Plus/Plus Query 6 TAATTGAATTCAATAGCATGGTTGGTATTTTCTCCAGATTTTCTGTTGTTAGAGGCGGCC 65 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct 207 TAATCGAATTCAATAGCATGGTTGGTATTTTCTCCAGGTTTTCTGTTGTTAGAGGCAGCC 266 Query 66 ATAGGA-GAACACAGAGTGCCATCGATGGCAGGGAAGTCTTGTCTCCAAGATCTGATCTT 124 ||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 267 ATA-GACGAACACAGAGTGCCATCGATGGCAGGGAAGTATTGTCTCCAAGATCTGATCTT 325 Query 125 GCTCCTTCAGCTAACACCACAACCGCTGCAACTCATGGGATCGAAGTAGCAACAGAGTTT 184 ||||| || |||| ||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 326 GCTCCGGCAACTAATACCACAACCACTGAAACTCATGGGATCGAAGTAGCAACAGAGTTT 385 Query 185 AAACCGGTGGATCACCCGATGGAGCCTTTGGACAACGATCAACCGATCCAATGTCCACTC 244 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 386 AAACCGGTGGATCACCCGATGGAGCCCTTAGACAACGATCAACCGATCCAATGTCCACTC 445 Query 245 CCGGAGCCATCCATTCTCAATGATGGGAGACTCTGGAAAGAGAGAGTGTCGGCTAATTCG 304 || |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 446 CCAGAGCCATCCATTCTCAATGACGGGAGACTCTGGAAAGAGAGAGTGTCGGCTTCTTCG 505 Query 305 ATGAGGAGACG-AGATGATTTGGCGATTGCCCAAGATGGGATGGATGAAGAATCTGATGT 363 ||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 506 ATGAGGAGACGAAG-TGATTTGGCTATTGTCCAAGATGGGATGGATGAAGAATCTGATGT 564 Query 364 TTCTGTGA---CAATTCCATCACGGGCTAGCCAATGCAATACCAACCGTCCTATCTTGCC 420 |||||||| |||||||||| ||| ||||||||||||||||||||||||| |||||||| Sbjct 565 TTCTGTGACGTCAATTCCATCGCGGACTAGCCAATGCAATACCAACCGTCCGATCTTGCC 624 Query 421 TTCACTCAGTGCGCCCGAACACAACTTGCTTAATCTACTAGAAGAATGCAAAGTATCTGG 480 |||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 625 TTCACTTAGTGCGCCGGAACACGACTTGCTTAATCTACTAGAAGAATGCAAAGTATCTGG 684 Query 481 TAGTATCTA---A-GAACCTGCAGGGATGGTCTA 510 ||||||||| | ||||||||| |||||||||| Sbjct 685 TAGTATCTAGCTAAGAACCTGCATGGATGGTCTA 718 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24363561295 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5