BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934625 Length=780 Score E Sequences producing significant alignments: (Bits) Value AT2G38740.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 1273 0.0 > AT2G38740.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:16194327-16196113 REVERSE LENGTH=1165 Length=1165 Score = 1273 bits (689), Expect = 0.0 Identities = 750/779 (96%), Gaps = 5/779 (1%) Strand=Plus/Plus Query 3 TTTCTTCGGGTCTCATCACAATGAATGGCTTTTCTGATCTTAATCCTTCTGAGAGCAGCA 62 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||| Sbjct 99 TTTCTTCGGGTCTCATCACAATGAATGGCTTCTCTGATCTTAATCCTTCT--GAG-AGCA 155 Query 63 AACCTTCTCTGTCACATTTAGCTCCATTAGAAGCCATTCTGTTTGATGTTGATGGAACAC 122 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 156 AACCTTCTCTGTCACAACTAGCTCCATTAGAAGCCATTCTGTTTGATGTTGATGGAACAC 215 Query 123 TCTGTGATTCAGATCCCATCCACCTTATTGCCTTCCAAGAACTGCTTCAAGAGATTGGTT 182 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 216 TCTGTGACTCAGATCCCATCCACCTTATTGCCTTCCAAGAACTGCTTCAAGAGATTGGTT 275 Query 183 TTAACAATGGTGTCCCAATTGATGAGAAATTCTTTGTTGAGAATATTGCTGGAAAACACA 242 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 276 TTAACAATGGTGTCCCAATCGATGAGAAATTCTTTGTTGAGAACATTGCTGGAAAACACA 335 Query 243 ATTCTGAAATTGCTCAAATTCTGTTCCCTGATGATGTTTCAAGAGGGTTAAAATTCTGTG 302 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 336 ATTCTGAAATTGCTCTACTTCTGTTCCCTGATGATGTTTCAAGAGGGTTAAAATTCTGTG 395 Query 303 ATGAGAAGGAAGCTCTTTATCGCAAAATTGTTGCAGAAAAGATAAAGCCACTTGATGGGC 362 |||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 396 ATGAAAAGGAAGCTCTTTACCGCAAAATTGTTGCAGAGAAGATAAAGCCACTTGATGGGC 455 Query 363 TTATAAAACTGACCAAATGGATCGAAGATCGTGGATTGAAACGAGCTGCGGTTACAAACG 422 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 456 TTATAAAACTGACCAAATGGATCGAAGATCGTGGATTGAAACGAGCTGCGGTAACAAACG 515 Query 423 CTCCAAAAGAAAACGCAGAGCTCATGATATCAAAACTTGGTCTGACTGATTTCTTTCAAG 482 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 516 CTCCAAAAGAAAACGCAGAGCTCATGATATCGAAACTTGGTCTGACTGATTTCTTTCAAG 575 Query 483 CAGTGATTCTTGGCTCTGAATGTGAACATCCCAAACCACACCCTGGACCTTACTTGAAGG 542 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 576 CAGTGATTCTTGGCTCTGAATGTGAATTTCCCAAACCACACCCTGGACCTTACTTGAAGG 635 Query 543 CTCTCAAAGTGCTTAACGTGTCAAAGGAGCACACTTTAGTGTTT-GAAGACTCGATCTCT 601 |||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct 636 CTCTTGAAGTGCTTAACGTGTCAAAGGAGCACACGCTAGT-TTTCGAAGACTCGATCTCT 694 Query 602 GGGATAAAAGCTGGAGTTGCAGCTGGAATGCCTGTGATTGGACTCACTACAGGTAATCCA 661 |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct 695 GGGATAAAAGCTGGAGTTGCAGCTGGAATGCCAGTGATTGGACTGACTACAGGGAATCCA 754 Query 662 GCAAGCCTGCTTGTGCAAGCAAAACCCGCTTTTCTCATCGAGAACTATGCGGATCCAAAA 721 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 755 GCAAGCCTGCTTATGCAAGCAAAACCCGCTTTTCTCATCGAGAACTATGCGGATCCAAAA 814 Query 722 CTGTGGGCTGTGTTGGAAGAACTTGATAACAAGTCGTAAGTCTCACTTGTTTGGCTTAT 780 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 815 CTGTGGGCTGTGTTGGAAGAACTTGATAACAAGTCTTAAGTCTCACTTGTTTGGCTTAT 873 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37926780985 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5