BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934672 Length=2401 Score E Sequences producing significant alignments: (Bits) Value AT2G39190.2 | Symbols: ATATH8 | Protein kinase superfamily prot... 3594 0.0 > AT2G39190.2 | Symbols: ATATH8 | Protein kinase superfamily protein | chr2:16349968-16355963 FORWARD LENGTH=2835 Length=2835 Score = 3594 bits (1946), Expect = 0.0 Identities = 2218/2345 (95%), Gaps = 35/2345 (1%) Strand=Plus/Plus Query 41 ACACTTCGCTGATGTTGTACGCAATGACGTTGATTTCCTGAAGAACAAAATCGGCATCGG 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 304 ACACTTCGCTGATGTTGTACGCAATGACGTTGATTTCCTGAAGAACAAAATCGGTATCGG 363 Query 101 ACTCCGGTGGGCGAATGAGGCTTTTCGTGTACCGGAAGTGACTAAATCCGCTGAGGAATT 160 |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| | Sbjct 364 ACTCCGTTGGGCTAACGAGGCTTTTCGTGTACCGGAAGTGACTAAATCCGCTGAGGAACT 423 Query 161 GTTTTGGCTTCGGCATCTTGAGGATCATGCTTCTTC-GAATTTGGAGTCACAATCTTGGC 219 |||||||||| ||||||||||||||||| |||| || ||||||| ||||||||||||||| Sbjct 424 GTTTTGGCTTAGGCATCTTGAGGATCATACTTC-TCAGAATTTGAAGTCACAATCTTGGC 482 Query 220 CTCAGCCTTCGTACTCAGGGCTCTCTGGGGTGGACTTGTTCATGGCTGATGTCAAAGCTT 279 |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||| | Sbjct 483 CTCAGCCTTCCTACTCAGGGCTCACTGGGGTGGATTTGTTCATGGCTGATGTCAAAGCCT 542 Query 280 TGGAGGCATATGCTGCTTACTTTTACTGTCTTTCTAAGATGTGGTCAAGACCACTTCCTG 339 ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 543 TGGAGACATATGCTGGTTACTTTTACAGTCTTTCTAAGATGTGGTCAAGACCACTTCCTG 602 Query 340 AAGTTTATGATTCACAAGCTGTTGCAGATTACTTTAATTGCAGGCCGCATGTCGTTGCCT 399 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 603 AAGTTTATGATTCACAAGCTGTTGCAGATTACTTTAATTGCAGGCCTCATGTCGTTGCCT 662 Query 400 TTAGGCTTCTCGAGGTATTTTCTGCGTTCATGGTTGCTGCCATCAGATTACGAACATCAG 459 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 663 TTAGGCTTCTCGAGGTATTTTCTGCGTTCACGATTGCTGCCATCAGATTACGAACATCAG 722 Query 460 CATCAGACAAAAGCAAAAGTTTAGAAGCTTCAGAGCAGAATTTTGGGATGGTGTTGAAAG 519 |||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 723 CATCAGTTAAGGGCAAAAGTTTAGAAGCTTCAGAGCAGATTTTTGGGATGGTGTTGAAAG 782 Query 520 AAACCATGCTACATTTGGGTCCAACTTTTATTAAAGTTGGTCAATCGCTTTCGACGAGGC 579 ||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| Sbjct 783 AAACCATGCTACATTTGGGCCCAACTTTTATCAAAGTTGGTCAATCGCTTTCCACGAGGC 842 Query 580 CAGATATCATTGGGACTGAAATCTCCAAGGCACTATCTGAACTGCATGACCGAATCCCTC 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 843 CAGATATCATTGGGACTGAAATCTCCAAGGCACTATCTGAACTGCATGACCGAATCCCTC 902 Query 640 CCTTTCCCTGGCCTGAGGCTGTAAAAATCATTGAAGAGGAATTAGGTGGTCCTGTCGAGT 699 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | Sbjct 903 CCTTTCCCTGGCCTGAGGCTGTAAAAATCCTTGAAGGGGAATTAGGTGGTCCTGTCGAAT 962 Query 700 CATTCTTTAGCCAGTTTTCTCAAGAAACTGTAGCAGCAGCATCCTTTGGTCAGGTCTACC 759 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 963 CATTCTTTAGTCAGTTTTCGCAAGAAACTGTAGCAGCAGCATCCTTTGGTCAGGTCTACC 1022 Query 760 GAGGAAGGACTCTTGATGGTTCAGATGTTGCAGTGAAAGTTCAGCGCCCTGATCTGAGAC 819 |||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1023 GAGGAAGGACCCTCGATGGTGCAGATGTTGCAGTGAAAGTTCAGCGCCCTGATCTGAGAC 1082 Query 820 ATGCAGTGCTACGCGACATTTACATTTTGCGACTTGGGTTAGGTGTATTACGAAAGGTAG 879 ||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| Sbjct 1083 ATGCAGTGCTACGCGACATCTACATTCTGCGACTTGGGTTAGGTGTATTGCGAAAGGTAG 1142 Query 880 CAAAGAGAGAAAATGACATTCGTGTATATGCTGATGAGCTTGGAATGGGTTTGGCTGGAG 939 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1143 CAAAGAGAGAAAATGACATTCGTGTATATGCTGATGAGCTTGGAATGGGTTTGGCTGGAG 1202 Query 940 AATTGGACTTTACTTTAGAGGCTGCCAATGCCT-TGGAATTTCAGGAAGCTCATTCACGA 998 ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| Sbjct 1203 AATTGGACTTTACTTTAGAGGCTGCCAATGCCTCT-GAATTTCAGGAAGCTCACGCACGA 1261 Query 999 TTTTCCTATATCCGGGTTCCAAAAGTATATAAGCATCTAACGCGCAAAAGAGTTTTGACC 1058 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1262 TTTTCCTATATCCGGGTTCCAAAAGTATATCAGCATCTAACGCGCAAAAGAGTTTTGACC 1321 Query 1059 ATGGAATGGATGGTTGGTGAAAGCCCCACCGATCTACTCGCAATATCTTCTGGTTACTCT 1118 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1322 ATGGAATGGATGGTTGGTGAAAGCCCAACCGATCTACTCGCAATATCTTCTGGTTACTCT 1381 Query 1119 GATCATGACAATGAGAGTCATGA-AAAGCAAAAAATGGAAGCGAGAAGGCGTCTTCTTGA 1177 ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| Sbjct 1382 GATCATGACAATGAGAGTCATGAGAAA-CAAAAAATTGAAGCGAGAAGGCGTCTTCTTGA 1440 Query 1178 TCTAGTGAACAAAGGGGTAGAGGCAACACTAGTTCAACTCCTTGATACAGGTATTTTGCA 1237 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1441 TCTGGTGAACAAAGGGGTAGAGGCAACTCTAGTTCAACTCCTTGATACAGGTATTTTGCA 1500 Query 1238 TGCAGATCCGCATCCTGGAAATCTGCGGTACACAACATCAAGACAAATAGGGTTTTTGGA 1297 ||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 1501 TGCAGATCCGCATCCTGGAAACCTTCGTTACACAACATCAAGACAAATAGGGTTTTTGGA 1560 Query 1298 CTTTGGTTTAGTTTGTCGGATGCAAAGAAAACATCAGCTTGCCATGCTCGCATCAATTGT 1357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1561 CTTTGGTTTAGTTTGTCGGATGCAAAGAAAACATCAGCTTGCCATGCTCGCATCAATTGT 1620 Query 1358 GCATATCGTAAATGGTGATTGGGCCTTTCTTGTTGAATCTTTGACTGATATGGATGTCAT 1417 |||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||| Sbjct 1621 GCATATCGTAAATGGTGATTGGGCCTGTCTTGTTGAATCGTTGATTGATATGGATGTCAT 1680 Query 1418 CACGCCAGGTGTTAATACCCGTCGTTTTACTCTGGATCTGGAATATGCATTGGGAGAGGT 1477 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1681 CACGCCAGGCGTTAATACCCGTCGTTTTACTCTGGATCTGGAATATGCATTGGGAGAGGT 1740 Query 1478 TAAACTTAGAAACGGGATTCCTGATATCGAGTTCACCAAGGTGCTTAGTAAAATAGTCAA 1537 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1741 TAAACTTATAAACGGGATTCCTGATATCGAGTTCACCAAGGTGCTTAGTAAAATAGTCAA 1800 Query 1538 AGTGGCCCTGAAGTATCAGCTACGCATGCCACCATACTTCACACTTGTTCTCCGTTCTCT 1597 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct 1801 TGTGGCCCTGAAGTATCAGCTACGCATGCCACCATACTTCACACTTGTCCTCCG-T-TC- 1857 Query 1598 TGCTTGCTTGGAAGTTATTTGCGTTCTATTTGTCTTCCCAGGTCTGGCTGCAACTGGAGA 1657 | ||||||| | ||| | | ||||||||||||| ||||||| Sbjct 1858 T-CTTGCTT----G---CTTG-G----A-----------AGGTCTGGCTGCAGCTGGAGA 1893 Query 1658 TCCAAACTTTAAGACATTTGAGGCTGCATACCCTTTTGTGGTTCAAAAACTCATCACTGA 1717 |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 1894 TCCAAATTTTAAGACATTTGAGGCAGCATACCCTTTTGTGGTTCAAAAGCTCATCACTGA 1953 Query 1718 AAATTCAGCTGCAACAAGGAAGATTCTTCATTCGGCAGTCCTTAACAGAAAGAAGGAATT 1777 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1954 AAATTCAGCTGCAACAAGGAAGATTCTTCATTCGGCAGTCCTTAACCGAAAGAAGGAATT 2013 Query 1778 CCGATGGGAAAGGGTTGCTCTTTTCCTGAGTAAAAGTTCGACGAGGAAACAATCGCCACT 1837 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2014 CCGATGGGAAAGGGTTGCTCTTTTCCTGAGTAAAAGTTCTACGAGGAAACAATCGCCACT 2073 Query 1838 GGTAACGTTATCGAGGGATGAAACTTCTGTTGATAGTAGTTCCAATCCAACGGAAAAAGA 1897 | ||| |||||| |||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 2074 GCTAAAGTTATCAAGGGATGAAACTTCTGTTGATAGTAGTTCCAATCTAACGGACAAAGA 2133 Query 1898 TGCTGACAATGTAAGTTTGGTCTTGAGACTTTTGGCATCCAAAAACGGTGTGGTTCTTAG 1957 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2134 TGCTGACAATGTAAGTTTGGTCTTGAGACTTTTGGCATCCAAAAATGGTGTGGTTCTTAG 2193 Query 1958 AAGACTCTTGATGGCTGCGAACGGGACTTCACTGATCCGGACATTTATTTCAAGAGAGGC 2017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2194 AAGACTCTTGATGGCTGCGAACGGGACTTCACTGATCCGGACATTTATTTCAAGAGAGGC 2253 Query 2018 ACATGTCATCCGCCAGAAACTTTGCCTGACAATTGCAAATACGATGTACCAATGGATGGT 2077 || |||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||| Sbjct 2254 ACTTGTCATACGCCAGAAACTTTGCATGACGATTGCAACTACGATGTACCAATGGATGGT 2313 Query 2078 CGGAAGCCTCGGAATTGAATCCCTTAAATTCATCTCTCTTTCAGACCCACAACTATCTTC 2137 |||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||| Sbjct 2314 TGGAAGCCTTGGAATTGAATCCCTTAAATTCATTTCTCTTTCAGACCCACCACCATCTTC 2373 Query 2138 AGGAATCAACATTACAGTCAAAGACTTCAAGATTCTGAT-ACGCGACAAACGTGTCAGAG 2196 |||||||||||||||||||||||||||||||||||| || | ||||| || ||||||| Sbjct 2374 AGGAATCAACATTACAGTCAAAGACTTCAAGATTCTAATCAAT-GACAAGCGGGTCAGAG 2432 Query 2197 TGATACTGAGAAAGATACTGGAGTCTGCAAAGAGTGACCGAATTTTGATGCTCAGATTCT 2256 | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2433 TAATACTGAGAAAGATACTGGAGTCTGCAAAGAGTGACCGAGTTTTGATGCTCAGATTCT 2492 Query 2257 GCTGGACTTCTTTTGTCATGTCTCTCACAACCACTGCTCTCGCTTGCCATCGGTTTGTTA 2316 |||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct 2493 GCTGGACTTCCTTTGTCATGTCTCTCACCACCACTGCGCTTGCTTGCCATCGGTTTGTGA 2552 Query 2317 TATCGGTCTCTGAAGGTTACGTCAACTACTTATCTTTGTCTGCTCCAGTTGCACTTCGTA 2376 | ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 2553 TCTCGGTCTCTGAAGGTTACGTCAACTACTTATCTCTGTCTGCTCCAGTCGCACTTCGTA 2612 Query 2377 CCTGA 2381 ||||| Sbjct 2613 CCTGA 2617 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 119226294375 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5