BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934753 Length=872 Score E Sequences producing significant alignments: (Bits) Value AT2G39805.2 | Symbols: | Integral membrane Yip1 family protein... 1411 0.0 > AT2G39805.2 | Symbols: | Integral membrane Yip1 family protein | chr2:16609915-16612554 REVERSE LENGTH=1333 Length=1333 Score = 1411 bits (764), Expect = 0.0 Identities = 834/868 (96%), Gaps = 4/868 (0%) Strand=Plus/Plus Query 7 TTTTCTCGTTGTTCAATGGATGAGTCGTTCGCTAATCTACAAACGAGCCATTTGCTTGGT 66 ||||||| ||| || ||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 187 TTTTCTCTTTGATCGATGGATGAGTCGTTCGCTAATCTACAATCAAGCCATTTGCTTGGT 246 Query 67 TCAGTTCCGGCTGTGATCAGCGACGACAAGAGAAGCACAAATGTACCAATAGCAAGCGTA 126 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 247 TCAGTTCCGGCTGTGATCAGCGACGACAAGAGAAGCACAAATGTACCAATAGCAAGCGTC 306 Query 127 AATGAAGGTCCTTCTGCTAA-CATGCAAATATTTCCACCAAATCTAGGAAACAATACAAA 185 |||||||| |||||||| || |||||||||||||||||| |||||||||||||||||||| Sbjct 307 AATGAAGGCCCTTCTGC-AAGCATGCAAATATTTCCACCGAATCTAGGAAACAATACAAA 365 Query 186 GGGTTATCAAACTCTTGAGAGTCCAACAGTAGAAGGACCAGAACTACAGCCATCAAACAA 245 ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| Sbjct 366 GGGTTATCAAACTCTTGAGAGCCCAACAGTAGAAGGACCAGCACAACAGCCATCAAACAA 425 Query 246 CTGGAAGGGATTTTTTAACGTTTACTCATATACCCAATACTTCGACGTGGACACGGACGT 305 ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 426 CTGGAAGGGCTTTTTTAATGTCTACTCATATACCCAATACTTCGACGTGGACACGGACGT 485 Query 306 TGTATTGAACAGATTGATGAGCTCGTTATATCCTACTAGTGGGGATTTTTTCAACAAGAT 365 ||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 486 TGTTTTGAACAGATTAATGAGCTCTTTATATCCTACTAGTGGAGATTTTTTCAACAAGAT 545 Query 366 TGATGCAAACCCTGATTTGTATGGACTTGTCTGGATCTGCACTACGCTTGTGTTTGTGCT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 546 TGATGCAAACCCTGATTTGTATGGACTTGTCTGGATCTGCACTACGCTTGTGTTTGTGCT 605 Query 426 TGCTTCTCTCGGAAATTGTGCCACGTATCTCGTGAAGAAACGAACCGACAGTAATGCTCC 485 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 606 TGCTTCTCTCGGAAATTGTGCTACATATCTCGTGAAGAAACGAACCGACAGTAATGCTCC 665 Query 486 TTGGATCTTTGATGTGAACTATATGAATTTGGCAGCATCTATAATCTATGGATATGCAAT 545 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 666 TTGGATCTTTGATGTGAACTATATGAATTTGGCAGCATCTATAATATATGGATATGCAAT 725 Query 546 AATTGTGCCTCTGGGATTTTATTTCT-CACTCCGTTATATGGGGTCCAAAGCTGATCTTC 604 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 726 AATTGTGCCTCTGGGATTTTATTT-TGCACTCCGTTATATGGGGTCCAAAGCTGATCTTC 784 Query 605 TAAGATTCTGGTGCCTCTGGGGATACTCTCTCTTCATCTTCGTTCCAACCTCTCTTCCAT 664 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 785 TAAGATTCTGGTGCCTTTGGGGATACTCTCTCTTCATTTTCGTTCCAACCTCTCTTCCAT 844 Query 665 TGCTTATTCCCGTAGAGTTTCTGAGATGGGTGATTATACTCTTAGCTGGTAGTGCATCAT 724 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 845 TGCTTATTCCAGTAGAGTTTCTGAGATGGGTGATTATACTCTTAGCTGGTAGTGCATCAT 904 Query 725 CGTGCTTTGTTGCCCTGAATCTACGGTCCTACCTCGAGACGAACAATGATATCACGGTTG 784 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 905 CGTGTTTTGTTGCCCTGAATCTACGGTCTTACCTCGAGACGAACAATGATATCACGGTTG 964 Query 785 TAATGGCTGCAGCATTTGGTCTGCAAATGGTTCTTTCGATCTTCATCAAGGTCTGGTTCT 844 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 965 TAATGGCTGCAGCATTTGGTCTGCAAATGGTTCTTTCAATCTTCATCAAGGTCTGGTTCT 1024 Query 845 TTCCTTAATCTCCACGACACAGTCAACA 872 |||||||||||||| || || ||||||| Sbjct 1025 TTCCTTAATCTCCATGAGACGGTCAACA 1052 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42548322509 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5