BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934911
Length=2215
Score E
Sequences producing significant alignments: (Bits) Value
AT2G40950.1 | Symbols: BZIP17 | Basic-leucine zipper (bZIP) tra... 3419 0.0
AT3G56660.1 | Symbols: BZIP49 | basic region/leucine zipper mot... 388 9e-107
> AT2G40950.1 | Symbols: BZIP17 | Basic-leucine zipper (bZIP) transcription
factor family protein | chr2:17087620-17090424
REVERSE LENGTH=2467
Length=2467
Score = 3419 bits (1851), Expect = 0.0
Identities = 2099/2212 (95%), Gaps = 43/2212 (2%)
Strand=Plus/Plus
Query 1 CCCTAAATCTCAGTTTCAAAATGGCTGAACCAATCACGGAGGAGCAGCCTCCTCCACCTG 60
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 79 CCCTAAAACTCAGTTTCAAAATGGCTGAACCAATCACCAAGGAGCAGCCTCCTCCACCTG 138
Query 61 CTCCTGACCCTAATTCTACCTTCCCTCCTCCGTCCGATTTTGATTCCATCTCGATCCCTC 120
|||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 139 CTCCGGACCCTAATTCCACCTACCCTCCTCCGTCCGATTTTGATTCCATCTCGATCCCTC 198
Query 121 CGTTCGATGATCATTTCTACCATTCCGGCTCCGATCAGACTCCGATTGGTGAACTCATGT 180
|||| |||||||| | || ||||||||||||||||||||||||||| ||||
Sbjct 199 CGTTAGATGATCA----T----TT----CTCCGATCAGACTCCGATTGGTGAACTAATGT 246
Query 181 CCGATCTGGGGTTTCCCGATGGTGAATTCGAGCTCACTTTCGACGGTATGGACGATCTTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 247 CCGATCTGGGGTTTCCCGATGGTGAATTCGAGCTCACTTTCGACGGTATGGACGATCTTT 306
Query 241 ACTTTCCC-GCTGAGAATGAGTCGTTTCTCATCCCTGTGAATACGTCTAATCAAGAACAG 299
|| ||||| ||||||||||||||||||||||||||| | |||||||| ||||||||||||
Sbjct 307 AC-TTCCCTGCTGAGAATGAGTCGTTTCTCATCCCTATCAATACGTCCAATCAAGAACAG 365
Query 300 TTTGGTGATTTTACGCCGGAGTCTGAAGGTTCTGGAATTTCCGGTGATTGTCTTGTTCTT 359
||||||||||| || |||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct 366 TTTGGTGATTTCACTCCGGAGTCTGAAAGTTCTGGAATTTCCGGTGATTGTATTG---TT 422
Query 360 CCCAAAGATGCCGATAAGGGTATTACAACTTCCGGTTGCATTAACC--G---------G- 407
||||||||||| |||||| |||||||||||||||||||||||||| | |
Sbjct 423 CCCAAAGATGCAGATAAGACTATTACAACTTCCGGTTGCATTAACCGGGAATCTCCTAGA 482
Query 408 GATTCCGATGATCGTTGCTCCGGTGCTGACCGTAGTTTAGATCTACCGACTCCATTGTCG 467
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 483 GATTCCGATGATCGTTGCTCCGGTGCTGACCATAATTTAGATCTACCGACTCCATTGTCC 542
Query 468 TCTCAGGGTTCCGGTAATTGCGGTTCTGATGTTTCGGAAGCTACAAATGAATCGTCGCCT 527
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 TCTCAGGGTTCGGGTAATTGCGGTTCTGATGTTTCGGAAGCTACAAATGAATCGTCGCCT 602
Query 528 AAATCAAGAAACGTTGTC-GTCGACCAGAAGGTTAAAGTGGAAGAAGCTGCCACTACGAC 586
||||| |||||||||| | |||||||||||||||||||||||||||||||| || |||||
Sbjct 603 AAATCGAGAAACGTTG-CGGTCGACCAGAAGGTTAAAGTGGAAGAAGCTGCTACGACGAC 661
Query 587 GTCTAT-TATTACCAAGAGGAAGAAAGAGATCGATGAGGATTTGACTGACGAGTCTAGGA 645
| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 662 GAC-GTCTATTACCAAGAGGAAGAAAGAGATCGATGAGGATTTGACTGACGAGTCTAGGA 720
Query 646 ACAGTAAGTACAGGAGATCAGGAGAGGATGCAGACGCTAGTGCTGTTACCGGTGAAGAAG 705
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 721 ACAGTAAGTACAGGAGATCGGGAGAGGATGCTGACGCTAGTGCTGTTACCGGTGAAGAAG 780
Query 706 ATGAGAAAAAGAAAGCTAGACTCATGAGAAACCGTGAAAGTGCTCAGCTTTCTAGGCAGA 765
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 ATGAGAAAAAGAGAGCTAGACTCATGAGAAACCGTGAAAGTGCTCAGCTTTCTAGGCAGA 840
Query 766 GGAAGAAGCATTACGTCGAGGAGCTGGAAGAGAAGGTTAGGAATATGCATTCTACCATTA 825
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct 841 GGAAGAAGCATTACGTCGAGGAGCTTGAAGAAAAGGTTAGGAATATGCATTCTACGATTA 900
Query 826 CGGATTTGAACGGTAAGATATCGTATTTCATGGCCGAGAATGCTACTCTAAGGCAGCAAT 885
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 901 CGGATTTGAACGGTAAGATATCGTATTTCATGGCTGAGAATGCTACTCTAAGGCAGCAAT 960
Query 886 TGGGCGGCAATGGAATGTGCCCGCCGCATCTTCCACCACCTCCGATGGGAATGTATCCAC 945
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 TGGGTGGCAATGGAATGTGCCCGCCGCATCTTCCACCACCTCCGATGGGAATGTATCCAC 1020
Query 946 CTATGGCTCCAATGCCTTATCCATGGATGCCTTGTCCGCCTTATATGGTGAAGCAACAAG 1005
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1021 CTATGGCTCCAATGCCTTATCCATGGATGCCTTGTCCTCCTTATATGGTGAAGCAACAAG 1080
Query 1006 GATCTCAAGTGCCTTTGATTCCCATTCCTAGGTTGAAGCCACAGAACACCCTTGGAACAT 1065
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 1081 GATCTCAAGTGCCTTTGATTCCTATTCCTAGGTTGAAACCACAGAACACCCTTGGAACAT 1140
Query 1066 CCAAGGCTAAGAAGTCGGAGAGTAAGAAGGGTGAAGCTAAGACTAAGAAGGTCGCCAGTA 1125
|||||||||||||||| |||||||||||| ||||||||||||| |||||||| || ||||
Sbjct 1141 CCAAGGCTAAGAAGTCCGAGAGTAAGAAGAGTGAAGCTAAGACCAAGAAGGTGGCTAGTA 1200
Query 1126 TTAGTTTTCTGGGTCTTCTGTTTTGTCTATTTTTGTTTGGTGCATTGGCTCCAATTGTGA 1185
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1201 TTAGTTTTCTGGGTCTTCTGTTTTGTCTATTTTTGTTTGGTGCATTAGCTCCAATTGTGA 1260
Query 1186 ACGTTAATTATGGAGGAATTAGTGGTGCCTTTTATGGGAACTATAGGTCTAATTATATTA 1245
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1261 ACGTTAATTATGGAGGAATTAGTGGTGCTTTTTATGGGAACTATAGATCTAATTATATTA 1320
Query 1246 CTGACCAGATTTACAGTCAGCATAGGGATAGAGTTTTGGATACATCTCGTAGTGGTGCTG 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 CTGACCAGATTTACAGTCAGCATAGGGATAGAGTTTTGGATACATCTCGTAGTGGTGCTG 1380
Query 1306 GTACTGGGGTTTCTAATAGTAATGGGATGCATTGTGGGAGAGATTCTGATCGAGGAGCTA 1365
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1381 GTACTGGGGTTTCTAATAGTAATGGGATGCATCGTGGGAGAGATTCTGATCGAGGAGCTA 1440
Query 1366 GGAAAAATATATCTGCAACAGAGAGCTCTGTAC-CTCCTGGAAATGGTAGTGAGCCTCTA 1424
||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||
Sbjct 1441 GGAAAAATATATCTGCAACAGAGAGTTCTGT-CACTCCTGGAAATGGTAGTGAGCCTCTA 1499
Query 1425 GTTGCATCACTCTTTGTTCCGAGGAATGACAAGCTTGTGAAGATAGATGGGAATTTGATT 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 GTTGCATCACTCTTTGTTCCGAGGAATGACAAGCTTGTGAAGATAGATGGGAATTTGATT 1559
Query 1485 ATCAATTCTATATTGGCGAGTGAGAAAGCTGTGGCTTCGCGAAAGGCTTCTGAATCAAAG 1544
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 1560 ATCAATTCTATATTGGCGAGTGAGAAAGCCGTGGCTTCGAGAAAGGCTTCTGAATCAAAG 1619
Query 1545 GAGAGGAAAGCTGACTTGGTGATCTCTAAAGATTATTCCCCTGCACTGCCTCTACCTGAT 1604
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1620 GAGAGGAAAGCTGACTTGATGATCTCTAAAGATTATACCCCTGCACTGCCTCTACCTGAC 1679
Query 1605 GTGGGAATGACCGAGGATAT-GGCTAAGCATCTCTATAGATCTAAGGCTGAAAAACAGAA 1663
||||||| ||| ||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1680 GTGGGAAGGACAGAGGA-ATTGGCTAAGCATCTCTATAGATCTAAGGCTGAAAAACAGAA 1738
Query 1664 AGCTCTATCCTCTGGCTCTGCTGATACTCTGAAAGACCAATTCAAAACAAAAGCAGCCAA 1723
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1739 AGCTCTATCCTCTGGCTCTGCTGATACTCTGAAAGACCAAGTCAAAACAAAAGCAGCCAA 1798
Query 1724 CGGTGAAATGCAGCAATGGTTCCGTGAAGGTGTTGCAGGGCCCATGTTTAGTTCAGGGAT 1783
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1799 CGGTGAAATGCAGCAATGGTTCCGTGAAGGTGTTGCAGGTCCCATGTTTAGTTCAGGGAT 1858
Query 1784 GTGCACTGAAGTGTTTCAGTTTGATGTATCCTCAACCTCTGGAGCCATCATTCCTGCATC 1843
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1859 GTGCACTGAAGTGTTTCAGTTTGATGTATCCTCAACCTCTGGAGCCATCATTCCTGCAGC 1918
Query 1844 TCCAGCAACCAATGTCTCTGCTGAACACGGTAAGAACACCACAGAGACACACAAGCAAAA 1903
| | |||| |||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 1919 TAC--CAAC----GTCTCTGCTGAACACGGTAAGAACACCACAGACACACACAAGCAACA 1972
Query 1904 GAACAGAAGAATCCTTCGTGGTCTTCCCATTCCACTCCCGGGATCAGATTTTAACCTCAC 1963
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1973 GAACAGAAGAATCCTTCGTGGTCTTCCCATTCCACTCCCAGGATCAGATTTTAACCTCAC 2032
Query 1964 CAAAGAGCACCAGAGAAACAGCAGTAGCAAAGAAATAAAGCCTGCTTCATCAATGGTTGT 2023
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2033 GAAAGAGCACCAAAGAAACAGCAGTAGCAAAGAAATCAAGCCTGCTTCATCAATGGTTGT 2092
Query 2024 ATCTGTGCTTGTTGATCCCAGAGAAGGCGGTGATGGAGATATAGATGGGATGATTGGGGG 2083
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2093 ATCTGTGCTTGTTGATCCCAGAGAAGGAGGTGATGGAGATATAGATGGGATGATTGGGGG 2152
Query 2084 ACCAAAATCACTGTCTCGAGTTTTTGTGGTCGTGCTTCTTGACAGTGCAAAGTATGTAAC 2143
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 2153 ACCAAAATCACTGTCTCGAGTTTTTGTAGTCGTGCTTCTGGACAGTGCAAAGTATGTAAC 2212
Query 2144 ATACTCTTGTGTCCTACCTCGATCAGGAGCTCCTCATCTTGTGACAACTTGA 2195
|||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2213 ATACTCCTGTGTCCTACCTCGATCAGGAGCTCCTCATCTTGTGACCACTTGA 2264
> AT3G56660.1 | Symbols: BZIP49 | basic region/leucine zipper motif
protein 49 | chr3:20986217-20988213 REVERSE LENGTH=1863
Length=1863
Score = 388 bits (210), Expect = 9e-107
Identities = 687/902 (76%), Gaps = 94/902 (10%)
Strand=Plus/Plus
Query 1335 CATTGTGGGAGAGATTCTGATCGAGGAGCTAGGAA-AAATATATCTGCAACAGAGAGCTC 1393
||||||||| |||||||||||| ||||| | |||| ||| |||||| |||||||| |
Sbjct 1015 CATTGTGGGGGAGATTCTGATCAAGGAG-TGGGAAGAAACGTATCTGAAACAGAGA-ATT 1072
Query 1394 T-GTACCTCCTGGAAATGGTAGTGAGCCTCTAGTTGCATCACTCTTTGTTCCGAGGAATG 1452
| | |||||| ||||| ||||||| |||||||||||||| || ||||||||||||||||
Sbjct 1073 TGGGGCCTCCTCGAAATAGTAGTGAACCTCTAGTTGCATCGCTATTTGTTCCGAGGAATG 1132
Query 1453 ACAAGCTTGTGAAGATAGATGGGAATTTGATTA-TCAATTCTATATTGGCGAGTGAGAAA 1511
| |||||||| ||||| ||||| |||||||||| || ||||| | |||||||| ||||||
Sbjct 1133 AAAAGCTTGTCAAGATCGATGGAAATTTGATTATTC-ATTCTGTTTTGGCGAGCGAGAAA 1191
Query 1512 G-CTGTGGCTTCGCGAAAGGCTTCTGAATCAAAGGAGAGG-AAAGCTGACT-TGGTGA-T 1567
| | | || ||| |||| | ||| | ||| || || |||| || | | | | |
Sbjct 1192 GCCAG-GGATTC-TGAAA--C-AAAGAA-CGAAGAAG-GGAAAAG-TG-TTCTAGCAACT 1242
Query 1568 -C-TCT-AAAGATTATTCCCCTGCACTGCCTCTACCTGA-T----GTG-GGAATGACCGA 1618
| || ||| ||| || |||||| ||||| ||||||| | | || |||| |
Sbjct 1243 ACAACTAAAACTTTA-TCTCCTGCATTGCCTTTACCTGACTCCACAAGCCCAAGGACC-A 1300
Query 1619 -GGATATGGCTAAGCATCTCTATAGATCTAAGGCTGAAAAACAGAAAGCTCTATCCTCTG 1677
|||| || ||||||| |||||||| | || | | ||| | | || ||| ||||
Sbjct 1301 GGGATGTGTCTAAGCACCTCTATAG--CGAA-ACGGGGAAA-GGCCTG-TC-ATCTTCTG 1354
Query 1678 GCTCTGCTGATAC-TCTGAAAGACCAATTCAAAACAA-AAGCAGCCAACGGTGAAATGCA 1735
| |||| |||| | || ||| |||||| ||||| ||| || |||||| ||| |||||||
Sbjct 1355 GTTCTGATGATGCTTC-GAACGACCAACTCAAATCAACAA-TAGCCAATGGTAAAATGCA 1412
Query 1736 GCAATGGTTCCGTGAAGGTGTTGCAGGGCCCATGTTTAGTTCAGGGATGTGCACTGAAGT 1795
||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct 1413 GCAATGGTTTCGTGAAGGTGTTGCAGGGCCAATGTTCAGTTCGGGGATGTGCACTGAAGT 1472
Query 1796 GTTTCAGTTTGATGTATCCTCAACCTCTGGAGCCATCATTCCTGCATCTCCAGCAACCAA 1855
||||||||||||||| ||||||| ||| ||||||||||||||||| |||||| || |
Sbjct 1473 GTTTCAGTTTGATGTCTCCTCAAACTCAGGAGCCATCATTCCTGCTTCTCCA-CAT--A- 1528
Query 1856 TGTCTCTGCTGAACACG-GTAAGAACACCACAGAGACACACAAGC--AAAA-GAACAGAA 1911
||| |||| | |||||||||||| || ||||| ||| |||| ||||||||
Sbjct 1529 ---CTC-----AACA-GTGTAAGAACACCAGTGATACACAAAAGGGGAAAAAGAACAGAA 1579
Query 1912 GAATCCTTC-GTGGTCTTCCCATTCCACTCCCGGGATCAGATTTTAACCTCACCAAAGA- 1969
||||||| | ||||| || |||| || ||| || ||||| || ||||||||
Sbjct 1580 GAATCCT-CAGTGGTGGTC---TTCC------GGTATCTGACTTTAATCTTACCAAAGAA 1629
Query 1970 GCACCAGAGAAACAGCAGTAGCAAAGA-AA-T------AAA----GCCTG-CTTCATCAA 2016
| | || | | |||| ||||||||| || | ||| ||| | | ||||||
Sbjct 1630 G-ATCATA-A--CAGCTCTAGCAAAGACAAGTTCCGGGAAACCAAGCCAGGCC-CATCAA 1684
Query 2017 TGGTTGTATCTGTGCTTGTTGATCCCAGAGAAGGCGGTGATGGAGATATAGATGGGATGA 2076
|||| || |||||||||||||||||||||||||||||| ||||||| || ||||||||||
Sbjct 1685 TGGTAGTGTCTGTGCTTGTTGATCCCAGAGAAGGCGGTAATGGAGACATCGATGGGATGA 1744
Query 2077 TTGGG-GGACCAAAATCACTGTCTCGAGTTTTTGTGGTCGTGCTTCTTGACAGTGCAAAG 2135
| ||| ||| ||||| ||| ||| |||||||| | ||||||||| | ||| ||| |||
Sbjct 1745 T-GGGAGGAACAAAACCACAGTCCCGAGTTTTCATAGTCGTGCTTGTGGACGGTGTGAAG 1803
Query 2136 TATGTAACATACTCTTGTGTCCTACCTCGATCAGGA-GCTCC-TCATCTTGTGACAACTT 2193
||| ||||||||||||| || || || ||| ||| | | ||| |||||| |||| | ||
Sbjct 1804 TATATAACATACTCTTGCGTTCTTCCACGACCAG-ATG-TCCCTCATCTCATGACCAGTT 1861
Query 2194 GA 2195
||
Sbjct 1862 GA 1863
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109888993005
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5