BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg934945

Length=904
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G41250.1 | Symbols:  | Haloacid dehalogenase-like hydrolase ...  1365    0.0  


> AT2G41250.1 | Symbols:  | Haloacid dehalogenase-like hydrolase 
(HAD) superfamily protein | chr2:17200659-17202618 REVERSE 
LENGTH=1143
Length=1143

 Score = 1365 bits (739),  Expect = 0.0
 Identities = 865/922 (94%), Gaps = 23/922 (2%)
 Strand=Plus/Plus

Query  1    TCAATC--ACAGAGAGAAGCTAATGGCGTTGTTAAGAATCAGGAAGGCGACGACGACACT  58
            ||||||  ||||| || ||||||||||||||   ||||||||||||||||||||||||||
Sbjct  47   TCAATCATACAGA-AGCAGCTAATGGCGTTG---AGAATCAGGAAGGCGACGACGACACT  102

Query  59   TCTCTAT-TCCGGT--G---------GG-ACGGATCGGATCGCGAGAACCGGAGCATTGC  105
            ||||| | ||||||  |         || |||||||||||||||||||||||||||||||
Sbjct  103  TCTCT-TCTCCGGTGGGATTACTCATGGAACGGATCGGATCGCGAGAACCGGAGCATTGC  161

Query  106  TGAGCCGTTGGATCTCCTCCGCTTCGTCATCTTCCGCTGTTGTGGCGGAGGATGAATCTG  165
            | ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| 
Sbjct  162  TCAGCCGTTGGATCTCCTCTGCTTCGTCATCTTCCGCTGTTGTAGCGGATGATGAATCTA  221

Query  166  GTGGGATTTACGGATTGGGAAGTGTATTGAAGGAGTATGAAGATTATAGGAGATCTCTCT  225
            ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct  222  GTGGGATTTACGGATTGGGAAGTGTGTTGAAAGAGTATGAAGATTATAGGAGATCTCTCT  281

Query  226  ACGGTGAGATCACTCATAAGGCGTTGCTTGTTGATGCTGTTGGTACTCTCCTTGTTCCCG  285
            | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct  282  ATGGTGAGATCACTCATAAGGCTTTGCTTGTTGATGCTGTTGGTACTCTCCTTGTTCCCG  341

Query  286  CTCAACCTACGGCTCAGATATACAAGAATATTGGTGAGAAGTACGGGGTCGAGTACTCGG  345
            |||||||||| ||||||||||| ||||||||||| ||||||||||| || ||||||||||
Sbjct  342  CTCAACCTACTGCTCAGATATATAAGAATATTGGAGAGAAGTACGGAGTGGAGTACTCGG  401

Query  346  AGGCTGAGATACTTACTAGATACAGAAGAGCTTATCAGAAACCATGGGGCGGATCTCATC  405
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct  402  AGGCTGAGATACTTACTAGATACAGAAGAGCTTATCAGAAACCATGGGGTGGATCTCATC  461

Query  406  TTAGATATGTCAACGATGCGAGACCTTTCTGGCAGTATATAGTGACTGCATCAACAGGCT  465
            |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct  462  TTAGATATGTAAACGATGCAAGACCTTTCTGGCAGTATATAGTGACTGCATCAACAGGCT  521

Query  466  GCTCGGATTCTCAGTACTTTGAAGAGCTTTACAGTTATTTTACTACAGAACAGGCGTGGA  525
            |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  522  GCTCGGATTCACAGTACTTTGAAGAGCTTTACAGCTATTTTACTACAGAACAGGCGTGGA  581

Query  526  AGTTATGTGATCCAGATGCAGGGAGAGTGTTTAAGGCTATTAAAGAAGCGGGTGTGAAAG  585
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct  582  AGTTATGTGATCCAGATGCAGGGAAAGTGTTTAAGGCTATTAAAGAAGCGGGTGTAAAAG  641

Query  586  TTGCAATTGTGTCCAACTTCGATACTCGGTTAAGACCACTCCTACGTGCACTGAGATGTG  645
            ||||||| || |||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct  642  TTGCAATAGTCTCCAACTTCGATACTCGGTTAAGACCTCTCCTACGTGCATTGAGATGTG  701

Query  646  AAGACTGGTTTGATGCTGTAGCTGTTTCAGCAGAAGTTGAAGCGGAGAAACCAAACCCGA  705
            |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct  702  AAGATTGGTTTGATGCTGTAGCTGTTTCAGCAGAAGTTGAAGCGGAAAAACCAAACCCGA  761

Query  706  CTATCTTCTTGAAAGCTTGTGAGTTATTAGAAGTGAATCCTGAGGATGCGGTTCATGTAG  765
            |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct  762  CTATCTTCTTAAAAGCTTGTGAGTTATTAGAAGTGAATCCCGAGGATGCGGTTCATGTAG  821

Query  766  GAGATGACCGTAGGAATGATGTATGGGGAGCTAGAGACGCAGGCTGTGACGCTTGGCTCT  825
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  822  GAGATGACCGTAGGAATGATGTATGGGGAGCTAGAGACGCAGGCTGTGACGCTTGGCTCT  881

Query  826  GGGGAAGTGAAGTTACTTCGTTCAAACAGGTTGCTCAACGGATAGGAGTGAAGGGCTGAA  885
            |||||||||||||||| || || ||||||||||||||||||||||||||||||| |||||
Sbjct  882  GGGGAAGTGAAGTTACGTCATTTAAACAGGTTGCTCAACGGATAGGAGTGAAGGTCTGAA  941

Query  886  GCAAA-GCAT--GAGAGAAATG  904
            ||||| ||||  ||||||||||
Sbjct  942  GCAAAAGCATATGAGAGAAATG  963



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 44155815213


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5