BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934962 Length=1157 Score E Sequences producing significant alignments: (Bits) Value AT2G41360.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1419 0.0 > AT2G41360.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr2:17234374-17236279 FORWARD LENGTH=1318 Length=1318 Score = 1419 bits (768), Expect = 0.0 Identities = 946/1030 (92%), Gaps = 20/1030 (2%) Strand=Plus/Plus Query 21 ATGGCTAGAAACGTATCGTCGTGGTCATCCCTTTCTTGTTTGCCCGACGAGATGGTTCTG 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCTAGAAACGTATCGTCGTGGTCATCCCTTTCTTGTTTGCCCGACGAGATGGTTCTG 60 Query 81 AACTGCTTAGTCCGCGTCCCGAGACGGTACTACGAAAACGTCGCTTGCGTCTC-GAGAAG 139 |||||| ||| ||||||||||||||| |||||||||||| || |||||||||| | ||| Sbjct 61 AACTGCCTAGCCCGCGTCCCGAGACGCTACTACGAAAACATCTCTTGCGTCTCCGT-AAG 119 Query 140 GCTCAGGTCCCTTGTGCGCACGCCTGAGCTCTACCGGATGCGATCCCTCCTCCACAAGGA 199 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 120 GCTCAGGTCCCTTGTGCGTACCCCTGAGCTCTACCGGATGCGATCCCTCCTCCACAAGGA 179 Query 200 TTCCGTCTACGTCTGCTTCTGCGATAGGGAGAATTATTCTACTGATGCCACCTATCTTTG 259 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 180 TTCCATCTACGTCTGCTTCTGCGATAGGGAGAATTATTCGACTGATGCCACCTATCTTTG 239 Query 260 GTTCACTCTCCGTCCAACGA--G-GACAACGGGGTATCAATTGGTCCCGATCTCGTTCCC 316 ||||||||||||||| |||| | ||| | || |||||||||||||||| |||||||||| Sbjct 240 GTTCACTCTCCGTCCCACGACAGCGACGATGGAGTATCAATTGGTCCCGCTCTCGTTCCC 299 Query 317 TATTCATTGTTTCATGTTCCGATCTTCCACGGTCGCGGTGGATTCAGAGATATACTTTGT 376 || |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 300 TAGTCATAATTTCATGTTCCGAGCTTCCACCGTCGCGGTGGATTCAGAGATATACTTTGT 359 Query 377 GGGCGGACGTCCAAACCCGACCGAGCTGTGGATCCTTGATACCCGGTCTGGCAAGTTACG 436 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 360 GGGCGGACGTCCAAACCCGACCGAGTTGTGGATCCTTGATACCCGGTCTGGCAAGTTACG 419 Query 437 TCAGGGCCCGATCAAGCCGGAGTCCCGACGAATTGCGTCCAGCAACGCCGTGGGAGTATT 496 ||||||||||||||||||||||| || |||||||||||| |||| ||||||||||||||| Sbjct 420 TCAGGGCCCGATCAAGCCGGAGTTCCTACGAATTGCGTCTAGCAGCGCCGTGGGAGTATT 479 Query 497 CGGCGGAAAGATATATGTAATCCAAGACTTGATACAAGATGAGACCGAAGAGCAGGTTTA 556 || |||||||||| |||| ||||||||||||| |||||||||||||||||| |||||||| Sbjct 480 CGACGGAAAGATACATGTGATCCAAGACTTGAAACAAGATGAGACCGAAGAACAGGTTTA 539 Query 557 CGACCTAGAAACGCAAACTTGGAAAGTTGTAGGAGTCCCTGTCCCTGACGAGAAAGTGGA 616 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| Sbjct 540 CGACCTAGAAACGCAAACTTGGAAAGTCGTGGGAGTCCCTGTCCCTGACGAGAAAGCGGA 599 Query 617 TACTAAACCGA-TGATGGCGTCAAGTGTGTCACTGGAGGGGAAGGTTTATGCTATGGATG 675 || || ||||| | |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 600 TAGTAGACCGAAT-ATGGTGTCAAGTGTGTCATTGGAGGGGAAGGTTTATGCTAAGGATT 658 Query 676 ATG-ATAGTATCATTGTCTACAATCTGAGACAAGGTACAAGGAAGGAGAAACTGGA-TAT 733 || | ||||||| ||||||||||||||||||||||||||| |||||||||||||| | | Sbjct 659 TTGGA-AGTATCAGTGTCTACAATCTGAGACAAGGTACAAGAAAGGAGAAACTGGAGT-T 716 Query 734 GCCAATTGATGGGAATTGGGTTTGGTGCATATGTGTGGCAAACAATGTGCTCTTTGCttt 793 ||||||||||| | ||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 717 GCCAATTGATGATAGGTGGGTTTCGTGCATGTGTGTGGCAAACAATGTGCTCTTTGCTTT 776 Query 794 ttttACCAAATGTGGGCTAATGTGGCTTGACACAAAGCTTAAC---GTATGGAGAGTGGT 850 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 777 TTTTACCAAATATGGGCTACTGTGGCTTGACACAAAGCTTAACAACGTATGGAGAGTGGT 836 Query 851 TACTGGTGATGTGCAGACACTGCAGCGAAAGTTGTATGGCTCTGCAATGGCGGAATATTA 910 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 837 TACTGGTGATGTGCAGACACTGCATCGAAAGTTGTATGGCTCTGCAATGGCGGAATATTA 896 Query 911 TGGGAAGCTAGCTATTTTCTGGAGAGAAAGAGACATTAGTACTACTATTA---CTACAAA 967 ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| Sbjct 897 TGGGAAGCTAGCTATTTTCTGGAGAGAAAGATACATTAGTACTAGTATTAATACTACAAA 956 Query 968 GAAGAGGAAGAAGATGAATAATAATAACAAGGAGGAGAAGATCTGGTGTGCATTGATCGC 1027 ||| | || || | ||||| || || ||||| |||||||| |||| |||||||||||| Sbjct 957 GAATAATAATAA--T-AATAACAAGAAGAAGGAAGAGAAGATTTGGTCTGCATTGATCGC 1013 Query 1028 GTTGGATAGG 1037 |||| ||||| Sbjct 1014 GTTGAATAGG 1023 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56776816395 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5