BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg935146
Length=2939
Score E
Sequences producing significant alignments: (Bits) Value
AT2G42600.2 | Symbols: ATPPC2, PPC2 | phosphoenolpyruvate carbo... 4811 0.0
AT1G53310.1 | Symbols: ATPPC1, PEPC1, ATPEPC1, PPC1 | phosphoen... 1650 0.0
AT3G42628.1 | Symbols: | phosphoenolpyruvate carboxylase-relat... 217 6e-55
> AT2G42600.2 | Symbols: ATPPC2, PPC2 | phosphoenolpyruvate carboxylase
2 | chr2:17734369-17738973 REVERSE LENGTH=3160
Length=3160
Score = 4811 bits (2605), Expect = 0.0
Identities = 2829/2940 (96%), Gaps = 4/2940 (0%)
Strand=Plus/Plus
Query 1 AGAGAGAAGAAAAAGCATCAACC-AACCATGGCTGCGAGAAATTTGGAGAAGATGGCTTC 59
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 69 AGAGAGAGGAAAAAGCATCAACCAAACCATGGCTGCGAGAAATTTGGAGAAGATGGCTTC 128
Query 60 AATTGATGCTCAGCTCAGGCTTCTTGCTCCTGGCAAGGTTTCTGAAGACGACAAGCTTAT 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129 TATTGATGCTCAGCTCAGGCTTCTTGCTCCTGGCAAGGTTTCTGAAGACGACAAGCTTAT 188
Query 120 CGAGTACGATGCTCTCTTGTTGGATCGATTTCTCGATATTCTTCAGGATTTGCATGGCGA 179
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 189 CGAGTACGATGCTCTGTTACTGGATCGATTTCTCGATATTCTTCAGGATTTGCATGGCGA 248
Query 180 GGATGTCAGAGAATTCGTTCAAGAATGCTACGAGGTTGCGGCTGATTACGATGGTAACCG 239
||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct 249 GGATGTCAGAGAATTCGTTCAAGAATGCTACGAAGTTGCAGCTGATTACGATGGAAACCG 308
Query 240 CAACACTGATAAGCTAGAGGAGCTTGGAAATATGCTGACGAGTTTGGATCCAGGGGATTC 299
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 CAACACTGAGAAGCTTGAGGAGCTTGGAAATATGCTGACGAGTTTGGATCCAGGGGATTC 368
Query 300 GATTGTTGTCACAAAATCATTTTCCAACATGCTTAGCTTGGCTAATCTGGCTGAGGAAGT 359
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 369 AATTGTTGTCACTAAATCATTCTCCAACATGCTTAGCTTGGCTAATCTGGCTGAGGAAGT 428
Query 360 CCAGATTGCTTACCGGCGTAGGATTAAGAAACTCAAGAAAGGTGATTTCGCTGATGAGGC 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 429 CCAGATTGCTTACCGGCGTAGGATTAAGAAACTCAAGAAAGGTGATTTCGCTGATGAGGC 488
Query 420 CTCTGCAACGACGGAATCTGACATTGAAGAGACTCTCAAGAGGCTTTTGCAGCTTAACAA 479
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 489 CTCTGCAACAACGGAATCTGACATTGAAGAGACTCTCAAGAGGCTTTTGCAGCTTAACAA 548
Query 480 GACTCCTGAAGAGGTCTTTGATGCTCTCAAGAATCAGACTGTTGACTTGGTTTTAACTGC 539
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 549 GACTCCTGAAGAGGTCTTTGATGCTCTTAAGAATCAGACTGTTGACTTGGTTTTAACTGC 608
Query 540 TCATCCCACTCAATCTGTTCGTCGGTCTTTGCTCCAAAAGTTTGGAAGGATTCGTGACTG 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 609 TCATCCCACTCAATCTGTTCGTCGGTCTTTGCTCCAAAAGTTTGGAAGGATTCGTGATTG 668
Query 600 TTTGACGCAGTTATATGCAAAGGACATTACTCCTGATGATAAACAAGAACTTGATGAAGC 659
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 669 TTTGACGCAGTTATATGCAAAGGACATTACTCCTGATGACAAACAAGAACTCGATGAAGC 728
Query 660 TCTGCAACGAGAGATTCAAGCTGCTTTTCGCACTGATGAAATCAGAAGAACTCCTCCAAC 719
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||
Sbjct 729 TCTGCAACGAGAGATTCAAGCTGCTTTTCGCACAGATGAAATCCGAAGAACTCCTCCTAC 788
Query 720 ACCGCAGGATGAAATGAGAGCAGGGATGAGCTACTTCCATGAGACAATCTGGAAAGGAGT 779
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 789 ACCGCAAGATGAAATGAGAGCAGGGATGAGCTACTTCCATGAGACAATCTGGAAAGGAGT 848
Query 780 TCCTAAGTTCTTGAGACGTGTTGACACGGCTTTAAAGAACATTGGAATCAACGAGCGTGT 839
||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 849 TCCAAAGTTCTTAAGACGTGTTGACACAGCTTTAAAGAACATTGGAATCAACGAGCGTGT 908
Query 840 TCCTTACAATGCGCCTCTCATTCAGTTCTCTTCTTGGATGGGCGGAGACCGTGATGGAAA 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 TCCTTACAATGCGCCTCTCATTCAGTTCTCTTCTTGGATGGGCGGAGACCGTGATGGAAA 968
Query 900 CCCGCGAGTAACTCCTGAAGTTACAAGAGATGTATGCTTATTAGCTAGAATGATGGCTGC 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 969 CCCGCGAGTAACTCCTGAAGTTACAAGAGATGTATGCTTATTAGCTAGAATGATGGCTGC 1028
Query 960 TAATCTCTACTTCTCCCAGATAGAAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 TAATCTCTACTTCTCCCAGATAGAAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAA 1088
Query 1020 TGAGGAACTTCGTGTCCGTGCAGAACGTCAACGATGTGCGAAAAGGGATGCAAAACACTA 1079
|||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 1089 TGAGGAACTTCGGGTTCGTGCAGAACGTCAAAGATGTGCGAAGAGGGATGCAAAACACTA 1148
Query 1080 TATAGAATTTTGGAAACAAATCCCTGCGAATGAGCCATACCGAGCTATTCTTGGAGATGT 1139
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149 TATAGAATTCTGGAAACAAATCCCTGCGAATGAGCCATACCGAGCTATTCTTGGAGATGT 1208
Query 1140 AAGGGACAAGCTGTACAACACACGTGAACGTGCACGTCAGTTATTGTCAAGCGGAGTTTC 1199
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1209 GAGGGACAAGCTGTACAACACACGTGAGCGTGCACGTCAGTTATTGTCAAGCGGAGTTTC 1268
Query 1200 AGACGTTCCCGAAGAAGCTGTTTTCACAAGTGTGGATCAGTTTTTGGAGCCACTTGAGCT 1259
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 GGACGTTCCCGAAGACGCGGTTTTCACAAGTGTGGATCAGTTTTTGGAGCCACTTGAGCT 1328
Query 1260 TTGTTACAGGTCGCTCTGTGATTGCGGTGACAGACCTATTGCTGATGGAAGCCTGCTCGA 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1329 TTGTTACAGGTCGCTCTGTGATTGCGGTGACAGACCTATTGCTGATGGAAGCCTGCTTGA 1388
Query 1320 TTTCTTACGCCAAGTGTCAACATTTGGGCTTGCGCTTGTTAAACTTGATATCCGTCAAGA 1379
||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1389 TTTCTTACGCCAAGTGTCAACATTTGGCCTTGCTCTTGTGAAACTTGATATCCGTCAAGA 1448
Query 1380 ATCTGACAGACACACCGATGTCTTGGATGCTATCACGACGCACTTAGGTATTGGTTCTTA 1439
|||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1449 ATCTGAAAGACACTCTGATGTCTTGGATGCCATCACGACGCACTTAGGTATTGGTTCTTA 1508
Query 1440 CAAAGAGTGGTCGGAGGATAAAAGACAAGAATGGCTGTTATCTGAGCTAAGCGGGAAACG 1499
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1509 CAAAGAATGGTCGGAGGATAAAAGACAGGAATGGCTGTTATCTGAGCTAAGCGGGAAACG 1568
Query 1500 CCCTCTCTTTGGACCGGATCTTCCCAAAACTGAAGAGGTTGCAGATGTGTTGGACACTTT 1559
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1569 CCCTCTCTTTGGACCGGATCTTCCCAAAACCGAAGAGGTTGCAGATGTGTTGGACACTTT 1628
Query 1560 CAAAGTCATTTCTGAGCTTCCTTCGGATAGTTTTGGTGCTTATATAATCTCAATGGCCAC 1619
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1629 CAAAGTCATTTCTGAGCTTCCTTCGGATAGTTTTGGTGCTTATATTATCTCAATGGCCAC 1688
Query 1620 TGCTCCATCAGATGTGCTCGCTGTTGAGCTCTTGCAACGCGAATGTGGCATCACTAATCC 1679
|||||||||||| ||||||||||||||||| |||||||||||||| || |||||| ||||
Sbjct 1689 TGCTCCATCAGACGTGCTCGCTGTTGAGCTTTTGCAACGCGAATGCGGGATCACTGATCC 1748
Query 1680 TCTGAGAGTTGTCCCGTTGTTCGAGAAGCTAGCGGATTTAGAATCTGCGCCTGCTTCAGT 1739
||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct 1749 TCTGAGAGTTGTCCCGTTGTTCGAGAAGCTAGCGGATTTAGAATCCGCACCTGCTGCAGT 1808
Query 1740 CGCCCGTCTCTTCTCCATAGAATGGTACAGAAACCGGATCAATGGAAAGCAAGAAGTCAT 1799
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1809 TGCCCGTCTCTTCTCCATAGAATGGTACAGAAACAGGATCAATGGAAAGCAAGAAGTCAT 1868
Query 1800 GATCGGGTATTCTGACTCGGGCAAAGATGCTGGTCGTTTATCTGCGGCTTGGCAGCTATA 1859
||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1869 GATCGGGTACTCTGACTCGGGCAAAGATGCTGGTCGTTTATCAGCGGCTTGGCAGTTATA 1928
Query 1860 CAAGACTCAGGAAGAGCTCGTGAAGGTGGCAAAAGAATACGGAGTTAAGCTCACTATGTT 1919
||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 1929 CAAGACTCAAGAAGAGCTCGTGAAGGTGGCAAAAGAATACGGAGTCAAGCTGACAATGTT 1988
Query 1920 CCACGGAAGAGGTGGGACTGTAGGACGAGGAGGTGGACCAACCCATCTTGCTATTTTGTC 1979
|||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 1989 CCACGGAAGAGGTGGGACCGTTGGACGAGGAGGTGGACCTACCCATCTTGCTATTTTGTC 2048
Query 1980 TCAGCCTCCAGATACCATTCATGGGCAATTAAGGGTAACCGTTCAAGGTGAAGTTATTGA 2039
||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 2049 TCAGCCTCCGGATACCATTCATGGGCAATTGAGGGTAACGGTTCAAGGTGAAGTTATTGA 2108
Query 2040 ACAGTCTTTCGGAGAAGAGCACTTATGCTTTAGGACTCTTCAGCGTTTCACGGCTGCAAC 2099
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2109 ACAGTCTTTCGGAGAAGAGCACTTATGCTTTAGGACTCTTCAGCGTTTCACAGCTGCAAC 2168
Query 2100 ACTTGAGCATGGAATGCATCCACCGGTTTCCCCTAAGCCCGAGTGGCGCGTCCTCATGGA 2159
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 2169 ACTTGAGCATGGAATGCATCCACCGGTTTCCCCTAAGCCTGAGTGGCGTGTCCTCATGGA 2228
Query 2160 TGAAATGGCTATAATTGCCACTGAAGAATACCGTTCTGTCGTCTTCAAGGAGCCCCGTTT 2219
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2229 TGAAATGGCTATAATTGCCACTGAAGAATACCGTTCTGTTGTCTTCAAGGAGCCCCGTTT 2288
Query 2220 TGTTGAGTACTTCCGTCTGGCGACACCGGAGCTTGAGTATGGAAGGATGAACATAGGAAG 2279
||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 2289 TGTTGAGTACTTCCGTCTGGCAACACCAGAGCTCGAGTATGGAAGGATGAACATAGGAAG 2348
Query 2280 CCGACCATCGAAACGTAAACCGAGCGGAGGAATCGAGTCGCTGCGTGCGATCCCGTGGAT 2339
||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 2349 CCGACCATCAAAACGTAAACCAAGCGGAGGAATCGAGTCGCTGCGTGCAATCCCGTGGAT 2408
Query 2340 CTTTGCATGGACTCAGACGAGGTTTCACTTACCCGTGTGGCTAGGCTTTGGAGGGGCATT 2399
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 2409 CTTTGCGTGGACTCAGACGAGGTTTCACTTACCCGTGTGGCTTGGCTTTGGAGGAGCATT 2468
Query 2400 CAAACGCGTGATCCAGAAGGACAATAAGAATCTCAACATGCTCAAAGAGATGTACAACCA 2459
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2469 CAAACGCGTGATACAGAAGGACAGTAAGAATCTCAACATGCTCAAAGAGATGTACAACCA 2528
Query 2460 ATGGCCTTTCTTCCGTGTCACAATTGATCTGGTCGAAATGGTTTTCGCCAAAGGAGATCC 2519
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2529 ATGGCCATTCTTCCGTGTCACAATTGATCTAGTCGAAATGGTTTTCGCCAAAGGAGATCC 2588
Query 2520 AGGAATCGCGGCTCTGTACGACCGCCTCCTCGTCTCTGAAGAACTTCAACCATTCGGTGA 2579
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2589 CGGAATTGCGGCTCTGTATGACCGCCTCCTCGTCTCTGAAGAACTTCAACCATTCGGTGA 2648
Query 2580 ACAACTTCGAGTTAACTACCAAGAGACCAGACGCCTCCTCCTCCAGGTTGCAGGTCACAA 2639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2649 ACAACTTCGAGTTAACTACCAAGAGACCAGACGCCTCCTCCTCCAGGTTGCAGGTCACAA 2708
Query 2640 AGACATTCTAGAAGGTGACCCTTACTTAAGGCAAAGGCTGCAGCTACGTGACCCATACAT 2699
||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 2709 AGACATTTTAGAAGGTGACCCTTACTTGAGGCAAAGGCTGCAGCTTCGTGACCCATACAT 2768
Query 2700 CACGACATTGAACGTGTGCCAAGCCTACACACTCAAGCAGATCCGTGACCCAAGCTTCCA 2759
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 2769 CACGACATTGAACGTGTGTCAAGCCTATACACTCAAGCAGATCCGTGACCCAAGCTTCCA 2828
Query 2760 CGTCAAAGTCCGGCCACATCTATCTAAGGACTACATGGAGTCTAGTCCAGCAGCTGAGCT 2819
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 2829 CGTCAAAGTCCGGCCACATCTCTCTAAGGACTACATGGAGTCTAGTCCAGCGGCTGAGCT 2888
Query 2820 TGT-AAAGCTCAATCCAAAGAGCGAATACGCACCGGGACTTGAAGATACCGTCATCCTCA 2878
|| ||| || ||||||||||| |||||||||||||||||||||||||| || |||||||
Sbjct 2889 CGTGAAA-CTGAATCCAAAGAGTGAATACGCACCGGGACTTGAAGATACGGTTATCCTCA 2947
Query 2879 CTATGAAGGGTATTGCTGCCGGTATGCAAAACACCGGTTAAGCCAGTTTAAACCGT-CTT 2937
| ||||||||||| ||||| |||||||||||||||||||||| ||||||||| ||| |||
Sbjct 2948 CCATGAAGGGTATCGCTGCTGGTATGCAAAACACCGGTTAAGGCAGTTTAAAACGTTCTT 3007
> AT1G53310.1 | Symbols: ATPPC1, PEPC1, ATPEPC1, PPC1 | phosphoenolpyruvate
carboxylase 1 | chr1:19884027-19888276 REVERSE
LENGTH=3204
Length=3204
Score = 1650 bits (893), Expect = 0.0
Identities = 2292/2955 (78%), Gaps = 146/2955 (5%)
Strand=Plus/Plus
Query 46 GAGAAGATGGCTTCAATTGATGCTCAGC-TCAGGCTTCTTGCTCCTGGCAAGGTTTCTGA 104
||||||||||| || ||||||| ||| | || | | || | ||||||||| ||| |||
Sbjct 85 GAGAAGATGGCATCGATTGATGTTCATCTTC-GTCAACTGGTTCCTGGCAAAGTTAGTGA 143
Query 105 AGACGACAAGCTTATCGAGTACGATGCTCT-CTTGTTGGATCGATTTCTCGATATTCTTC 163
||||||||||||| | ||||| |||||| | ||| | ||||| ||||||||||| || |
Sbjct 144 AGACGACAAGCTTGTTGAGTATGATGCTTTGCTT-CTAGATCGGTTTCTCGATATCCTCC 202
Query 164 AGGATTTGCATGGCGAGGATGTCAGAG-AATTCGTTCAAGAATGC--TACGAG-GTTGCG 219
|||||||||| || || ||| || | | || | ||||||| | || || ||| || |
Sbjct 203 AGGATTTGCACGGTGAAGATCTCCGTGAAACT-GTTCAAG-A-GCTTTATGAGCATT-CT 258
Query 220 GCTGATTACGATGGTAA-C-CGCAACACTGATAAGCTAGAGGAGCTTGGAAATATGCTGA 277
|| || ||||| || || | | ||| || | |||||||||||||| || | | |||| |
Sbjct 259 GCAGAATACGAAGGGAAGCATG-AAC-CTAAGAAGCTAGAGGAGCTAGGGAGTGTGCTAA 316
Query 278 CGAGTTTGGATCCAGGGGATTCGATTGTTGTCACAAAATCATTT-TC-CAACATGCTTAG 335
||||||| |||||||| ||||| |||||| || | ||| | ||| || | | |||||||
Sbjct 317 CGAGTTTAGATCCAGGAGATTCCATTGTTATCGCTAAAGC-TTTCTCTC-ATATGCTTAA 374
Query 336 CTTGGCTAATCTGGCTGAGGAAGTCCAGATTGCTTACCGGCGTAGGATTAAGAAACTCAA 395
||| || ||| ||||||||||||| ||||||||||| || |||||||| ||||| || ||
Sbjct 375 CTTAGCCAATTTGGCTGAGGAAGTGCAGATTGCTTATCGCCGTAGGATCAAGAAGCTGAA 434
Query 396 GAAAGGTGATTTCGCTGATGAG-GCCTCTGCAACGACGGAATCTGA-CATTGAAGAGACT 453
|||||||||||| | ||||||| | |||||| || || |||||||| | ||||||| |||
Sbjct 435 GAAAGGTGATTTTGTTGATGAGAG-CTCTGCTACTACTGAATCTGATC-TTGAAGAAACT 492
Query 454 CTCAAGAGGCTT-TTGCAG--CTTAACAAGACTCCTGAAGAGGTCTTTGATGCTCTCAAG 510
|||||| |||| ||| || || |||||| ||||||||||| |||||||||||||||||
Sbjct 493 TTCAAGAAGCTTGTTGGAGATCTGAACAAGTCTCCTGAAGAGATCTTTGATGCTCTCAAG 552
Query 511 AATCAGACTGTTGACTTGGTTTTAACTGCTCATCCCACTCAATCTGTTCGTCGGTCTTTG 570
||||||||||| || |||||||| ||||||||||| ||||| ||||| | | || |||
Sbjct 553 AATCAGACTGTGGATTTGGTTTTGACTGCTCATCCTACTCAGTCTGTGAGAAGATCATTG 612
Query 571 CTCCA-AAAGTTTGGAAGGATTCGTGACTGTTTGACGCAGTTATATGCAAAGGACATTAC 629
|| || ||| ||| ||||| | |||||| || | || ||||||| ||||| |||||
Sbjct 613 CTTCAGAAA-CATGGGAGGATAAGAGACTGTCTGGCTCAACTATATGCTAAGGATATTAC 671
Query 630 TCCTGATGATAAACAAGAACTTGATGAAGCTCTGCA-ACGAGAGATTCAAGCTGCTTTTC 688
||||||||| || ||||| || ||||| ||||| || | |||||||||||||||| || |
Sbjct 672 TCCTGATGACAAGCAAGAGCTCGATGAGGCTCTTCAGA-GAGAGATTCAAGCTGCATTCC 730
Query 689 GCACTGATGAAATCAGAAGAACTCCTCCAACACCGCAGGATGAAATGAGAGCAGGG-ATG 747
| || |||||||||| |||||| || || || || || ||||| |||||||| ||| |||
Sbjct 731 GAACAGATGAAATCAAAAGAACACCACCTACTCCTCAAGATGAGATGAGAGC-GGGAATG 789
Query 748 AGCTACTTCCATGAGACAATCTGGAAAGGAGTTCCTAAG-TTCTTGAGACGTGTTGACAC 806
|| || |||||||| || ||||||||||| ||||||||| ||| || | |||||||||||
Sbjct 790 AGTTATTTCCATGAAACTATCTGGAAAGGTGTTCCTAAGTTTC-TGCGCCGTGTTGACAC 848
Query 807 GGCTTT-AAAGAACATTGGAATC-AACGAGCGTGTTCCTTACAATGCGCC-TCTCATTCA 863
|||||| ||| ||||| || ||| || || |||||||| || ||||| || | | |||||
Sbjct 849 GGCTTTGAAA-AACATAGGGATCGAA-GAACGTGTTCCATATAATGCTCCAT-TGATTCA 905
Query 864 GTTCTCTTCTTGGATGGGCGGAGACCGTGATGGAAACCCGCGAGTAACTCCTGAAGTTAC 923
|||||||||||||||||| || || ||||| || ||||| | || || |||||||| ||
Sbjct 906 GTTCTCTTCTTGGATGGGTGGTGATCGTGACGGTAACCCAAGGGTTACACCTGAAGTCAC 965
Query 924 AAGAGATGTATGCTTATTAGCTAGAATGATGGCTGCTAATCTCTACTTCT-CCCAGATAG 982
|||||||| ||||| |||||||||||||||||||||| | | ||||| | ||| || |
Sbjct 966 CAGAGATGTTTGCTTGTTAGCTAGAATGATGGCTGCTACTATGTACTT-TAACCAAATCG 1024
Query 983 AAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGAGGAACTTCGTGTC-CGTGC- 1040
|||||||||||||||||||||||||||||||||||||||| || || |||| | || ||
Sbjct 1025 AAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGACGAGCTGCGTG-CGCGAGCT 1083
Query 1041 -A-GAACGT-CAA-CGA-TGTGCGA--AAAGG-GATGCAAAACACTATATAGAATTTTGG 1092
| ||| || || | | | | ||| |||| | ||||||||| || |||||||| |||
Sbjct 1084 GATGAA-GTTCATGCAAAT-T-CGAGGAAAGATGCTGCAAAACATTACATAGAATTCTGG 1140
Query 1093 AAA-CAAATCCCTGCGAA-TGAGCCATACCGAGCT-ATTCTTGGAGATGTAAGGGACAAG 1149
|| ||| ||| | | || |||||||||||| | | |||||||| |||||||||||||||
Sbjct 1141 AAGTCAATTCC-TAC-AACTGAGCCATACCGTG-TGATTCTTGGCGATGTAAGGGACAAG 1197
Query 1150 CTGTA-CAACACACGTGAACGTGCACGTCAGTTATT--GTCAAGCGGAGTTTCAGACGTT 1206
|| || || |||||||||||| || | ||| | | | ||| ||| || || ||
Sbjct 1198 CTTTATCA-CACACGTGAACGCGCTCATCAACTGCTCAG-CAAT-GGACACTCTGATGT- 1253
Query 1207 CCC-GAAGAAGCTGTTTTCAC-AAGTGTGGATCAGTTTTTGGAGCCACTTGAGCTTTGTT 1264
||| | ||| ||| ||||| || | |||| ||||| ||||| || |||||||| ||||
Sbjct 1254 CCCTGTAGAGGCTACTTTCATTAACT-TGGAACAGTTCTTGGAACCTCTTGAGCTCTGTT 1312
Query 1265 ACAGGTCGCTCTGTG-ATTGCGGTGA-CAGACCTATTGCTGATGGAAGCCTGCTCGATTT 1322
|| | || || ||| || | ||||| | | || || || ||||||||||| || |||||
Sbjct 1313 ACCGATCTCTGTGTTCAT-GTGGTGATC-GTCCAATAGCAGATGGAAGCCTTCTTGATTT 1370
Query 1323 CTT-ACGCCAAGTGTCAACATTTGGGCT-TGCGCTTGTTAAACTTGATATCCGTCAAGAA 1380
||| | || |||| ||||| |||||||| | | ||||| | |||||| || | ||||||
Sbjct 1371 CTTGAGGC-AAGTCTCAACCTTTGGGCTCT-CTCTTGTGAGACTTGACATAAGGCAAGAA 1428
Query 1381 TCTGACAGACACACCGATGTCTTGGATGCTATCACGACGCACTTAGGTATTGGTTCTTAC 1440
|||||| | ||||| ||||| |||||||||||||| ||||| |||| ||| || || |||
Sbjct 1429 TCTGACCGCCACACTGATGTATTGGATGCTATCACCACGCATTTAGATATCGGATCCTAC 1488
Query 1441 AAAGAGTGGTCGGAGGATAAAA-GACAAGAATGGCTGTTATCTGAGCTAAGCGGGAAACG 1499
| ||||||||| || || | | ||||||||||| |||||||||||||| || |||||
Sbjct 1489 AGAGAGTGGTCTGAAGA-ACGCCGCCAAGAATGGCTTTTATCTGAGCTAAGTGGCAAACG 1547
Query 1500 CCCTCTCTTT-GGACCGGATCTTCCCAAAACTGAAGAGGTTGCAGATGTGT-TGGACAC- 1556
|| || ||| || | |||||||| ||||| ||||| | || ||||| | |||||||
Sbjct 1548 TCCGCT-TTTCGGTTCTGATCTTCCTAAAACCGAAGAAATAGCTGATGT-TCTGGACACG 1605
Query 1557 TTTCAAAGTCATTTCTGAGCTTCCTTCGGATAGTTTTGGTGCTTATATAATCTCAATGGC 1616
||||| ||||| | ||||| || | ||||| ||||||||||| || ||||| |||||
Sbjct 1606 TTTCAT-GTCATAGCCGAGCTACCAGCAGATAGCTTTGGTGCTTACATTATCTCTATGGC 1664
Query 1617 CACTGCTCCATCAGATGTGCTCGCTGTTGAGCTCTTGCAACGCGAATGTGGCA-TCACTA 1675
||||| || || ||||| | ||||||||||| || || || ||||| | | | | |
Sbjct 1665 AACTGCACCTTCTGATGTATTAGCTGTTGAGCTTTTACAGCGTGAATGCCG-AGTGAA-A 1722
Query 1676 -ATCCTCTGAGAGTTGTCCCGTTGTTCGAGAAGCTAGCGGATTTAGAATCTGCGCCTGCT 1734
| ||| |||||||||| ||| | || ||||||||||| ||| | ||| | || ||||||
Sbjct 1723 CAGCCTTTGAGAGTTGTTCCGCTCTTTGAGAAGCTAGCAGATCTGGAAGCAGCTCCTGCT 1782
Query 1735 TCAGTCGCCCGTCTCTTCTCCATAGAATGGTACAGAAACCGGATCAATGGAAAGCAAGAA 1794
|||| || | ||||| || | || ||||||| |||||| || || || ||||||||
Sbjct 1783 GCAGTTGCTAGGCTCTTTTCTGTTGATTGGTACAAAAACCGAATTAACGGTAAGCAAGAG 1842
Query 1795 GTCATGATCGGGTATTCTGACTCGGGCAAAGATGCTGGTCGTTTATCTGCGGCTTGGCAG 1854
|| ||||| || ||||| || || || ||||||||||| || |||||||| |||||||||
Sbjct 1843 GTTATGATTGGTTATTCGGATTCAGGAAAAGATGCTGGACGGTTATCTGCTGCTTGGCAG 1902
Query 1855 CTATACAA-GACTCAGGAAGAGCTCGTGAAGGTGGCAAAAGAATACGGAGTTAAGCTCAC 1913
||||||| | |||| |||||||| |||||||| || ||||| ||||| || ||||| ||
Sbjct 1903 TTATACAAAG-CTCAAGAAGAGCTTGTGAAGGTTGCTAAAGAGTACGGTGTGAAGCTAAC 1961
Query 1914 TATGTTCCACGGAAGAGGTGGGACTGTAGGACGAGGAGGTGGACCAACCCATCTTGCTAT 1973
||||| ||||| | ||||| || || ||| ||||||||||||||||||||||||||||
Sbjct 1962 AATGTTTCACGGTCGTGGTGGCACGGTCGGAAGAGGAGGTGGACCAACCCATCTTGCTAT 2021
Query 1974 TTTGTCTCAGCCTCCAGATACCATTCATGGG-CAATTAAGGGTAACCGTTCAAGGTGAAG 2032
|||||||||||||| ||||| ||| | || | | | || || |||||||||||||
Sbjct 2022 ATTGTCTCAGCCTCCGGATACTATTAACGGTTCCCTCC-GTGTCACAGTTCAAGGTGAAG 2080
Query 2033 TTATTGAACAGTC-TTTCGGAGAAGAGCACTTATGCTTTAGGACTCTTCAGCGTTTCACG 2091
| || || || || ||| || |||||||||||||||||||| || ||||||||||||||
Sbjct 2081 TCATCGAGCAATCGTTT-GGTGAAGAGCACTTATGCTTTAGAACACTTCAGCGTTTCACA 2139
Query 2092 GCTGCAACACTTGAGCATGGAATGCATCCACCGGTTTCCCCTAAGCCCGAGTGGCGCGTC 2151
||||| ||||| ||||| || |||| ||| || |||| ||||| || || ||||||| |
Sbjct 2140 GCTGCTACACTCGAGCACGGTATGCGTCCTCCAATTTCGCCTAAACCAGAATGGCGCG-C 2198
Query 2152 CT--CATGGATGAAATGGCTATAATTGCCACTGAAGAATACCGTTCTGTCGTCTTC-AAG 2208
| | ||||||||||||| | |||| || || || || || || || || ||| |||
Sbjct 2199 TTTGC-TGGATGAAATGGCGGTTGTTGCAACCGAGGAGTATCGCTCAGTTGTGTTCCAAG 2257
Query 2209 GAGCCCCGTTTTGTTGAGTACTTCCGTCTGGCGACACCGGAGCTTGAGTATGGAAGGATG 2268
| || || ||||| ||||||||||| || || |||||||| || ||||||||| | |||
Sbjct 2258 AA-CCTCGGTTTGTCGAGTACTTCCGCCTCGCTACACCGGAACTGGAGTATGGACGTATG 2316
Query 2269 AACATAGGAAGCCGACCATCGAAACGTAAACCGAGCGGAGGAATCGAGTCGCTGCGTGCG 2328
|| || |||||| |||| ||||| |||||||| ||||| || || || || || |||||
Sbjct 2317 AATATCGGAAGCAGACCTTCGAAGCGTAAACCAAGCGGTGGCATTGAATCTCTCCGTGCA 2376
Query 2329 ATCCCGTGGATCTTTGCATGGACTCAGACGAGGTTTCA-CTTACCCGTGTGGCTAGGCTT 2387
|| || |||||||| || |||||||| || || || || ||| || || ||||| || ||
Sbjct 2377 ATTCCATGGATCTTCGCTTGGACTCAAACAAGATTCCATCTT-CCTGTATGGCTTGGATT 2435
Query 2388 TGGAGGGGCA-TTCAAACGCGTGATCCAGAAGGACAATAAG-AATCTCAACATGCTCAAA 2445
||| ||| || | || |||||| | || ||| | || || ||| | |||||| ||
Sbjct 2436 CGGATCAGCAATT-AGACATGTGATCGAAAAAGACG-TCAGGAACCTCCATATGCTCCAA 2493
Query 2446 GAGATGTAC-AACCAATGGCCTTTCTTCCGTGTCACAATTGATCTGGTCGAAATGGTTTT 2504
|| |||||| ||| | ||||||||||| | ||||| |||||||| |||||||||| ||
Sbjct 2494 GATATGTACCAAC-ACTGGCCTTTCTTTAGAGTCACCATTGATCTAATCGAAATGGTGTT 2552
Query 2505 CGCCAAAGGAGATCCAGGAATCGCGGCTCTGTACGACC-GCCTCCTCGTCTCTGAAGAAC 2563
||| ||||||||||| || || || ||| ||||||| || || | || || || ||||
Sbjct 2553 CGCTAAAGGAGATCCTGGTATTGCTGCTTTGTACGATAAGCTTCTT-GTTTCAGAGGAAC 2611
Query 2564 T-TCAACCATTCGGTGA-ACAACTTC-GAGTTAACTACCAAGAGACCA-GACGCCTCCTC 2619
| | || || ||||| | |||| | ||| ||||| | |||| |||| || | || ||
Sbjct 2612 TCTGG-CCTTTTGGTGAGA-AACT-CAGAGCTAACTTCGAAGAAACCAAGAAAC-TCATC 2667
Query 2620 CTCCAGGTTGCAGGTCACAAAGA-CATTCTAGAAGGTGACCCTTACTT-AAGGCAAAGGC 2677
|||||| || || |||||||| | |||| |||||||| |||||||| || || || |
Sbjct 2668 CTCCAGACCGCTGGACACAAAGATC-TTCTTGAAGGTGATCCTTACTTGAAA-CAGAGAC 2725
Query 2678 TGCAG-CTACGTGACCCATACATCACGACAT-TGAACGTGTGCCAAGCCTACACACTCAA 2735
|| || || ||||| | ||||| || || | | || || || ||||| |||||| | ||
Sbjct 2726 TG-AGACTTCGTGATTCTTACATTACAAC-TCTCAATGTCTGTCAAGCTTACACATTGAA 2783
Query 2736 GCAGA-TCCGTGACCCAAGCTT-CCACGTCAAAGTCCGGCCACATC-TATCTAAGGAC-T 2791
| ||| ||||||| || || || ||| || | | || ||||| | | |||||||| |
Sbjct 2784 G-AGAATCCGTGATCCGAG-TTACCATGTGACTCTGCGACCACA-CATTTCTAAGGAGAT 2840
Query 2792 A-C--A-TGGAGTCTAGTCCAGCAGCTGAGCTTGTAAAGCTCAATCCAAAGAGCGAATAC 2847
| | | | ||| | | |||||| || || | |||| || || | |||||||||
Sbjct 2841 AGCGGAATCGAG-CAAA-CCAGCAAAAGAACTCATCGAGCTTAACCCGACTAGCGAATAC 2898
Query 2848 GCACCGGGACTTGAAGATAC-CGTCATCCTCACTATGAAGGGTATTGCTGCCGGTATGCA 2906
|| || |||||||||||||| | ||||| | || ||||||||||||||||| ||| | ||
Sbjct 2899 GCGCCAGGACTTGAAGATACAC-TCATCTTGACGATGAAGGGTATTGCTGCTGGTCTACA 2957
Query 2907 AAACACCGGTTAAGC 2921
|||||||||||||||
Sbjct 2958 AAACACCGGTTAAGC 2972
> AT3G42628.1 | Symbols: | phosphoenolpyruvate carboxylase-related
/ PEP carboxylase-related | chr3:14720735-14720872 REVERSE
LENGTH=138
Length=138
Score = 217 bits (117), Expect = 6e-55
Identities = 129/135 (96%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 28 ATGGCTGCGAGAAATTTGGAGAAGATGGCTTCAATTGATGCTCAGCTCAGGCTTCTTGCT 87
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1 ATGGCTGCAAGAAATTTGGAGAAGATGGCTTCTATTGATGCTCAGCTCAGGCTTCTTGCT 60
Query 88 CCTGGCAAGGTTTCTGAAGACGACAAGCTTATCGAGTACGATGCTCTCTTGTTGGATCGA 147
||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||
Sbjct 61 CCTGGCAAGGTTTCTAAAGACGACAAGCTTATCGAGTACGATGCTCTGTTACTGGATCGA 120
Query 148 TTTCTCGATATTCTT 162
|||||||||||||||
Sbjct 121 TTTCTCGATATTCTT 135
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 146086138016
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5