BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg935334 Length=1445 Score E Sequences producing significant alignments: (Bits) Value AT2G44140.1 | Symbols: | Peptidase family C54 protein | chr2:1... 2326 0.0 AT3G59950.1 | Symbols: | Peptidase family C54 protein | chr3:2... 1162 0.0 > AT2G44140.1 | Symbols: | Peptidase family C54 protein | chr2:18253497-18258035 REVERSE LENGTH=3221 Length=3221 Score = 2326 bits (1259), Expect = 0.0 Identities = 1387/1449 (96%), Gaps = 7/1449 (0%) Strand=Plus/Plus Query 1 TTGGTGCTTCATGTCTAGGTAATGAAGGCTTTATGTGATAGATTTGTTCCTCAACAATGT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 188 TTGGTGCTTCATGTCTAGGTAATGAAGGCTTTATGTGATAGATTTGTTCCTCAACAATGT 247 Query 61 TCTTCATCAAGCAAGAGTGATACGCATGATAAATCCCCTGTAGTTTCAGATTCAGGACCT 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 248 TCTTCATCAAGCAAGAGTGATACGCATGATAAATCCCCTTTAGTTTCAGATTCTGGACCT 307 Query 121 AGTGATAATAAGTCCAAGTTTACCTTATGGTCAAACGTCTTTACGTCTTCTTCCTCAGTT 180 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 308 AGTGATAATAAGTCCAAGTTTACCTTATGGTCAAACGTGTTTACGTCTTCTTCCTCAGTT 367 Query 181 TCTCAACCGTATAGGGAGTCTTCAACTTCTGGGCATAAGAAAGTTTGCACCACTCGTAAT 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 368 TCTCAACCGTATAGGGAGTCTTCAACTTCTGGGCATAAGCAAGTTTGCACCACTCGTAAT 427 Query 241 GGTTGGACAGCATTTGTAAAAAGAGTCTCTATGGCTACTGGCGCAATTAGGAGATTCCAG 300 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct 428 GGTTGGACAGCATTTGTAAAAAGAGTCTCTATGGCTAGTGGAGCAATTAGGAGATTCCAG 487 Query 301 GAGCGTGTTTTAGGGCCAAATAGGACTGGTCTGCCGAGCACAACAAGTGATGTATGGCTC 360 ||||||||||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||| Sbjct 488 GAGCGTGTTTTAGGGCCTAATAGGACCGGTCTTCCGAGCACAACTAGTGACGTATGGCTC 547 Query 361 TTGGGTGTCTGTTACAAAATATCCGAGGATGAGGCCTCGGGGGAAACCAATACTGGCTGT 420 ||||||||||| || |||||||| | ||||||| ||| ||||||||| |||||||| | Sbjct 548 TTGGGTGTCTGCTATAAAATATCTGCGGATGAGAACTCAGGGGAAACCGATACTGGCACT 607 Query 421 GTATTGGCTGCATTTCAACAAGATTTTTCATCTAAAATACTGATGACATACCGTAGAGGT 480 |||||||||||||| |||| |||||||||||| ||||||||||||||||| |||| |||| Sbjct 608 GTATTGGCTGCATTGCAACTAGATTTTTCATCCAAAATACTGATGACATATCGTAAAGGT 667 Query 481 TTTGAACCCTTTAGAGACACAACATATACCAGCGATGTGAACTGGGGTTGCATGATTCGA 540 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 668 TTTGAACCCTTTAGAGACACAACTTATACCAGCGATGTGAACTGGGGTTGCATGATTCGA 727 Query 541 AGTAGCCAGATGCTTTTTGCTCAGGCGTTGCTTTTCCATAGGGTGGGGAGGTCTTGGACT 600 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 728 AGTAGCCAGATGCTTTTTGCTCAGGCGTTGCTTTTCCATAGGCTGGGGAGGGCTTGGACT 787 Query 601 AAGAAATCTGAGCTGCCTGAACAGGAATACTTAGAGACCTTGGAACCTTTTGGTGATTCC 660 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 788 AAGAAATCTGAGCTTCCTGAACAGGAATACTTAGAGACCTTGGAACCTTTTGGTGATTCC 847 Query 661 GAGTCTTCAGCTTTCTCCATCCACAATCTTATAATAGCTGGAGCGTCCTATGGTCTCGCT 720 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 848 GAGCCTTCAGCTTTCTCCATCCACAATCTTATAATAGCTGGAGCGTCCTATGGTCTCGCT 907 Query 721 GCTGGGTCATGGGTAGGGCCATATGCCATTTGTCGAGCGTGGGAATCATTAGCGTGCAAG 780 ||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| Sbjct 908 GCTGGGTCATGGGTAGGACCGTATGCCATTTGTCGAGCGTGGGAGTCATTAGCGTGCAAG 967 Query 781 AAGAGAAAACAAACTGATTCTAAAAACCAGACGCTTCCTATGGCTGTTCATATTGTTTCT 840 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 968 AAGAGAAAACAAACTGATTCTAAAAACCAGACGCTTCCTATGGCTGTTCATATCGTTTCT 1027 Query 841 GGCAGCGAAGATGGAGAGAGAGGTGGGGCTCCAATTCTCTGTATAGAAGATGCCACCAAA 900 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1028 GGCAGCGAAGATGGAGAGAGAGGTGGGGCTCCAATTCTCTGTATAGAAGATGCTACCAAA 1087 Query 901 TCTTGTCTAGAATTCTCAAAAGGACAGTCTGAGTGGACACCGATTCTCCTTTTGGTCCCA 960 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct 1088 TCTTGTCTAGAATTCTCAAAAGGACAGTCTGAGTGGACACCGATTATCCTTTTGGTTCCA 1147 Query 961 CTGGTTCTCGGGCTTGACAGTGTGAATCCCAGGTACATTCCATCTCTCATAGCCACATTC 1020 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1148 CTGGTTCTTGGGCTTGACAGTGTGAATCCCAGGTACATTCCATCTCTCGTAGCCACATTC 1207 Query 1021 ACTTTTCCTCAGAGCGTAGGGATTTTGGGTGGCAAACCAGGTGCCTCAACTTACATAGTT 1080 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1208 ACTTTTCCTCAGAGCGTGGGGATTTTGGGTGGCAAACCAGGTGCCTCAACTTACATAGTT 1267 Query 1081 GGTGTTCAAGAAGACAAAGGTTTCTACCTTGATCCGCATGAAGTTCAACAGGTGGTCACA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1268 GGTGTTCAAGAAGACAAAGGTTTCTACCTTGATCCGCATGAAGTTCAACAGGTGGTCACA 1327 Query 1141 GTCAACAAGGAAACACCAGATGTTGACACATCCTCCTATCATTGCAATGTCATTCGTTAT 1200 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1328 GTCAACAAGGAAACACCAGATGTTGACACATCCTCCTATCATTGCAATGTCCTTCGTTAT 1387 Query 1201 GTTCCTTTGGAATCACTCGACCCATCTCTAGCTCTCGGATTCTATTGCCGCGACAAAGAT 1260 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1388 GTTCCTTTGGAATCACTCGACCCATCTCTAGCTCTAGGATTCTATTGCCGCGACAAAGAT 1447 Query 1261 GATTTCGACGACTTCTGTCTCCGAGCATCAAAACTAGCCGAGGATTCAAACGGTGCTCCA 1320 ||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct 1448 GATTTCGACGATTTCTGTCTCCGAGCATTGAAACTAGCTGAGGAATCAAACGGTGCTCCA 1507 Query 1321 CTATTCACCA-TAACTCAAACCCACAGCA-CGATAAACCAAAACAACTACGGGTTTTCGG 1378 | ||||| | | ||||||||||||| || |||||||||||| ||||||||||||| ||| Sbjct 1508 TTGTTCAC-AGTGACTCAAACCCACA-CAGCGATAAACCAAAGCAACTACGGGTTTGCGG 1565 Query 1379 ATGATGACAGCGAGGATGAACGTGAAGATGACTGGCAAATGCTCTGATCATCATCATC-- 1436 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1566 ATGACGACAGCGAGGATGAACGTGAAGATGACTGGCAAATGCTCTGATCATGATCATCGT 1625 Query 1437 -AAACATTT 1444 |||||||| Sbjct 1626 CAAACATTT 1634 > AT3G59950.1 | Symbols: | Peptidase family C54 protein | chr3:22144280-22147691 REVERSE LENGTH=1905 Length=1905 Score = 1162 bits (629), Expect = 0.0 Identities = 1139/1380 (83%), Gaps = 56/1380 (4%) Strand=Plus/Plus Query 1 TTGGTGCTTCATGTCTAGGTAATGAAGGCTTTATGTGATAGATTTGTTCC-TCAACAATG 59 ||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||| |||| Sbjct 263 TTGGTGCTTAATGACTAGGTAATGAAGGCTATATGTGATAGATTTGTTCCTTCAA-AATG 321 Query 60 TTCTTCATCAAGCA-AGAGTGATACGCATGATA-A--AT--CC--C--CTGTAGTTTCAG 109 |||||||||||||| | ||||| | || ||||| | || || | || ||||||||| Sbjct 322 TTCTTCATCAAGCACA-AGTGAAAAGCGTGATATATCATCCCCGACATCTCTAGTTTCAG 380 Query 110 ATTCAG-GACCTAGTGATAATAAGTCCAAGTTTACCTTATGGTCAAACGTCTTTACGTCT 168 |||| | | |||||||||| ||||| || || || ||||| || | || || | ||| Sbjct 381 ATTCCGCG-TCTAGTGATAACAAGTCAAACTTGACGTTATGCTCGGATGTGGTTGCCTCT 439 Query 169 TCTTCCTCAGTTTCTCAACCGTATAGGG-AGTCTTCAACTTCTGGGCATAAGAAAGTTTG 227 || ||| |||||||||||| || ||||| || |||||||||| |||||||| |||||| Sbjct 440 TCCTCCCCAGTTTCTCAACTGTGTAGGGAAG-CTTCAACTTCAGGGCATAACCCAGTTTG 498 Query 228 CACCACTCGTAATGGTTGGACAG-CATTTGTAAAAAGAGTC-TCTATGGCTA-CTGGCGC 284 |||||| | || | ||||||||| |||| |||||| || | |||||||||| | || || Sbjct 499 CACCACACATAGTAGTTGGACAGTTATTT-TAAAAACAG-CTTCTATGGCTAGC-GGGGC 555 Query 285 AATTAGGAGATTCCAGGAGCGTGTTTTAGGGCCAAATAGGACTGGT-CTGCCGAGCACAA 343 |||||||||||| || || ||||| |||||||| | |||||| ||| | || |||| | Sbjct 556 AATTAGGAGATTTCAAGACCGTGTATTAGGGCCGAGTAGGACGGGTATTTCC-AGCAGTA 614 Query 344 CAAGTGATG-TATGGCTCTTGGGTGTCTGTTACAAAATATCCGAGGATGAGGCCTCGGGG 402 | ||||| | |||||||| ||||||||||||| ||||| || |||| ||| |||| | Sbjct 615 CTAGTGA-GATATGGCTCCTGGGTGTCTGTTATAAAATCTCAGAGGGTGAATCCTCAGAA 673 Query 403 GAAACCA-ATACTGGCTGTGTATTGGCTGCATTTCA-ACAAGATTTTTCAT-CTAAAATA 459 | || || || ||||| |||||||||| ||| |||| |||||||||||||| || |||| Sbjct 674 G-AAGCAGATGCTGGCCGTGTATTGGCCGCA-TTCAGACAAGATTTTTCATCCT-TAATA 730 Query 460 CTGATGACATACCGTAGAGGTTTTGAACCCT-TTAGAGACACAACATATACCAGCGATGT 518 ||||||||||| ||||||||||||| | ||| || |||||||||| ||||| || ||||| Sbjct 731 CTGATGACATATCGTAGAGGTTTTG-AGCCTATTGGAGACACAACTTATACTAGTGATGT 789 Query 519 GAACTGGGGTTGCATGATTCGAAGTAGCCAGATGCTTTTTGCTCAGGCGTTGCT-TTTCC 577 ||||||||||||||| ||||||| |||||||||| || || ||||||||||| ||| | Sbjct 790 AAACTGGGGTTGCATGCTTCGAAGCGGCCAGATGCTCTTCGCACAGGCGTTGCTATTT-C 848 Query 578 ATAGGGTGGGGAGGTCTTGGACTAAGAA--A-TCTGAG-CTGCCTGAACAGGAATACTTA 633 | ||| |||| |||||||||| || || | || ||| | | | || || |||||||| Sbjct 849 AAAGGCTGGGAAGGTCTTGGAGGAAAAAGGATTCCGAGCCCG-CGGATGAGAAATACTTA 907 Query 634 GAGACCTTGGAACCTTTTGGTGATTCCGAGTCTTCAGCTTTCTCCATCCACAATCTTATA 693 |||| ||| |||| |||||||||| | ||| ||||||| ||||| || |||||||||||| Sbjct 908 GAGATCTTAGAACTTTTTGGTGATACTGAGGCTTCAGCATTCTCGATTCACAATCTTATA 967 Query 694 ATAGCTGGAGCGTCCTATGGTCTCGCTGCTGGGTCATGGGTAGGGCCATATGCCATTTGT 753 ||||||||| || ||||| || |||||||||||||||||||| |||||||| ||||| Sbjct 968 CTAGCTGGAGAATCTTATGGCCTGGCTGCTGGGTCATGGGTAGGACCATATGCTGTTTGT 1027 Query 754 CGAGCGTGGGAATCATTAGCGT-GCAAGAAGAGAA-AACAAACTGATTCTAAAAACCAGA 811 ||| | |||||||||||||| | | ||||| | || || |||||||| ||| || || Sbjct 1028 CGATCATGGGAATCATTAGC-TCGGAAGAACA-AAGAAGAAACTGATGATAAGCACAAGT 1085 Query 812 CG-CTTCCTATGGCTGTTCATATTGTTTCTGGCAGCGAAGATGGAGAGAGAGGTGGGGCT 870 || |||| |||||||||||||| ||||||||||| ||||| |||||||||||||| ||| Sbjct 1086 CGTTTTCC-ATGGCTGTTCATATCGTTTCTGGCAGTGAAGACGGAGAGAGAGGTGGAGCT 1144 Query 871 CCAATTCTCTGTATAGAAGATGCCACCAAATCTTGTCTAGAATTCTCAAAAGGACAGTCT 930 |||||||||||||| ||||||| ||||||| ||||| | ||||| ||| ||||| | || Sbjct 1145 CCAATTCTCTGTATTGAAGATGTCACCAAAACTTGTTTGGAATTTTCAGAAGGAGAAACT 1204 Query 931 GAGTGGACACCGATTCTCCTTTTGGTCCCACTGGTTCTCGGGCTTGACAGTGTGAATCCC 990 |||||| | || ||||| || |||||||| |||||||||||||||||||| ||||| ||| Sbjct 1205 GAGTGGCCGCCAATTCTTCTCTTGGTCCCTCTGGTTCTCGGGCTTGACAGAGTGAACCCC 1264 Query 991 AGGTACATTCCATCTCTCATAGCCACATTCACTTTTCCTCAGAGCGTAGGGATTTTGGGT 1050 ||||||||||||||||| |||||||| ||||| || ||||| ||| | || |||||||| Sbjct 1265 AGGTACATTCCATCTCTGATAGCCACTTTCACGTTCCCTCAAAGCCTCGGCATTTTGGGC 1324 Query 1051 GGCAAACCAGGTGCCTCAACTTACATAGTTGGTGTTCAAGAAGACAAAGGTTTCTACCTT 1110 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1325 GGCAAACCAGGTGCATCAACTTACATAGTTGGAGTTCAAGAAGACAAAGGTTTCTACCTT 1384 Query 1111 GATCCGCATGAAGTTCAACAGGTGGTCACAGTCAACAAGGAAACACCA-GATGTTGACAC 1169 ||||||||||| ||||||||||| || |||||||| || |||| | || ||||||||||| Sbjct 1385 GATCCGCATGATGTTCAACAGGTAGTGACAGTCAAGAAAGAAA-ATCAAGATGTTGACAC 1443 Query 1170 ATCCTCCTATCATTGCAATGTCATTCGTTATGTTCCT-TTGGAATCACTCGACCCATCTC 1228 ||| || || ||||||||| | | ||||||||||| ||| | ||||||||||| || | Sbjct 1444 ATCGTCTTACCATTGCAATACCCTCCGTTATGTTCCACTTG-AGTCACTCGACCCGTCAC 1502 Query 1229 TAGCTCTCGGATTCTATTGCC-GCGACAAAGATGATTTCGACGACTTCTGTCTCCGAGCA 1287 ||||||||||||||||||||| || ||||||||||||| || || |||||| |||||||| Sbjct 1503 TAGCTCTCGGATTCTATTGCCAGC-ACAAAGATGATTTTGATGATTTCTGTATCCGAGCA 1561 Query 1288 TCAAAACTAGCCG-AGGATTCAAACGGTGCTCCACTATTCACCATAACTCAAACCCACAG 1346 |||| ||||||| || | || || |||||||| || ||||| | |||||| | ||||| Sbjct 1562 ACAAAGCTAGCCGGAG-ACTCTAATGGTGCTCCTCTCTTCACTGTGACTCAATCTCACAG 1620 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71234573355 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5