BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg935404 Length=481 Score E Sequences producing significant alignments: (Bits) Value AT2G44650.1 | Symbols: CHL-CPN10, CPN10 | chloroplast chaperoni... 737 0.0 > AT2G44650.1 | Symbols: CHL-CPN10, CPN10 | chloroplast chaperonin 10 | chr2:18419370-18421110 REVERSE LENGTH=1171 Length=1171 Score = 737 bits (399), Expect = 0.0 Identities = 453/479 (95%), Gaps = 3/479 (1%) Strand=Plus/Plus Query 1 GGAGGAAGAAGAAGATCTGCTTCTGCAAAAAACCTTATCCTGCTATGGCCTCCACTTTCG 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 557 GGAGGAAGAAGAAGATCTGCTTCTGCAAAAAACCTTATCCTGCTATGGCTTCCACTTTCG 616 Query 61 --T-CTCTCTACCCAATCCTTTCTTTGCCTTTCCGGTCAAAACCACTACTCCTTCTACAG 117 | ||||||||| |||||||||||||| |||||||||||| | ||||||||||| || | Sbjct 617 TCTGCTCTCTACCAAATCCTTTCTTTGCTTTTCCGGTCAAAGCAACTACTCCTTCGACGG 676 Query 118 CTAACCATAAGCTTCTCGGAAGTCGAAGAGGTTGTCTTAGAATCAAAGCGATTTCCACTA 177 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 677 CTAACCATACGCTTCTCGGAAGTCGAAGAGGTTGTCTTAGAATCAAAGCGATTTCCACTA 736 Query 178 AATGGGAACCGACAAAGGTTGTTCCTCAGGGAGACAGAGTTCTTGTTCGTCTTGAAGATC 237 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 737 AATGGGAACCGACAAAGGTTGTTCCTCAGGCAGACAGAGTTCTTGTTCGTCTTGAAGATC 796 Query 238 TTCCTATGAAATCGTCGGGTGGAGTATTGTTGCCTAAAGCAGCTGTGAAGTTTGAGAGGT 297 ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| | Sbjct 797 TTCCTATTAAATCCTCAGGTGGAGTATTGTTGCCTAAAGCAGCTGTGAAGTTTGAGAGAT 856 Query 298 ACTTAACAGGAGAGGTTATCTCTGTTGGTTCTGAGGTTGGACAACAAGTTGGTCCTGGAA 357 || ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 857 ACCTAACAGGAGAGATTATATCTGTTGGTTCTGAGGTTGGACAACAAGTTGGACCTGGAA 916 Query 358 AGAAGGTTCTCTTCTCTGACGTGAGCGCTTATGAGGTCGATTTGGGAACCGATGCTAGAC 417 ||| |||| | |||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 917 AGAGGGTTTTGTTCTCTGATGTGAGCGCTTATGAGGTCGATTTGGGAACCGATGCTAGGC 976 Query 418 ATTGCTTCTGCAAAGAGAGTGACTTGTTGGCCCTCGTTGAGTGAAGTCTTGTCCAAGAG 476 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 977 ATTGCTTCTGTAAAGAGAGTGACTTGTTGGCCCTCGTTGAGTGAAGTCTTGTCCAAGAG 1035 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22906771032 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5