BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg935642 Length=529 Score E Sequences producing significant alignments: (Bits) Value AT2G46600.1 | Symbols: | Calcium-binding EF-hand family protei... 850 0.0 > AT2G46600.1 | Symbols: | Calcium-binding EF-hand family protein | chr2:19136019-19136600 FORWARD LENGTH=582 Length=582 Score = 850 bits (460), Expect = 0.0 Identities = 506/528 (96%), Gaps = 4/528 (1%) Strand=Plus/Plus Query 1 AGAGTTCACCAAAATCTATTCTCTCTCTTCTATTATCTTCCTCTAATGGAACCAACCGAG 60 ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| Sbjct 7 AGAGTTCACCAAAATCTCTTCTCTCTCTTCCATTGTCTTCCTCTAATGGAACCAACCGAG 66 Query 61 AAATCCATGATACTAGAAACTACCACTACGACGAAGATGGAGACCAAATACGAAGATATG 120 ||||| ||| ||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct 67 AAATCTATGTTACTAGAAACTACTAGTACCACGAAGATGGAGACCAAATACGAAGATATG 126 Query 121 TTGCCAGTTATGGCGGAGAAGATGGATGTTGAAGAGTTTGTATCAGAGTTATGCAAAGGT 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 127 TTACCAGTTATGGCGGAGAAGATGGATGTTGAAGAGTTTGTATCAGAGTTATGCAAAGGT 186 Query 181 TTCAGTTTGCTTGCGGATCCAGAGAGAGATCTCATCACAGCTGAGTCTCTAAGACGAAAC 240 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 187 TTCAGTTTGCTTGCGGATCCAGAGAGACATCTCATCACAGCTGAGTCTCTAAGACGAAAC 246 Query 241 TCTGGGATACTTGGGATTCAAGGTATGAGCAAGGAAGATGCTCAAGGAATGGTTAGAGAA 300 || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 247 TCAGGGATACTTGGAATTGAAGGTATGAGCAAGGAAGATGCTCAAGGAATGGTTAGAGAA 306 Query 301 GGAGACCTTGATGGAGATGGTGCTCTTAACCAAACCGAATTCTGCGTTCTCATGGTTCGG 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 307 GGAGACCTCGATGGAGATGGTGCTCTTAACCAAACCGAATTCTGCGTTCTCATGGTTCGG 366 Query 361 TTAAGCCCCGAGATGATGGAAGATGCGGAAACTTGGTTGGAGAAAGCACTCACCCAAGAA 420 |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 367 TTAAGCCCTGAGATGATGGAAGACGCCGAAACTTGGTTGGAGAAAGCACTCACCCAAGAA 426 Query 421 CTATGTAATCACAATCTCTCTTCTATGCCTTGA-TCATC--CC-CCTTTCTTGTGTATTC 476 ||||||||||||||||||||||||||||||||| | ||| || |||||||||||||||| Sbjct 427 CTATGTAATCACAATCTCTCTTCTATGCCTTGAATGATCGTCCTCCTTTCTTGTGTATTC 486 Query 477 TCTTTTTACTTCTACAAAACCTATAAATGTTTCTGAATATAAAATGaa 524 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 487 TCTTTTTACTTCTACAAAACCTATAAATGTTTCTGAATATAAAATGAA 534 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25318010088 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5