BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg935653 Length=489 Score E Sequences producing significant alignments: (Bits) Value AT2G46690.1 | Symbols: | SAUR-like auxin-responsive protein fa... 815 0.0 > AT2G46690.1 | Symbols: | SAUR-like auxin-responsive protein family | chr2:19180730-19181467 FORWARD LENGTH=738 Length=738 Score = 815 bits (441), Expect = 0.0 Identities = 478/495 (97%), Gaps = 6/495 (1%) Strand=Plus/Plus Query 1 TAAAAACGTTTTC-AAAAATCATGGGCACCGGAGAAAAACCCCTGAAGAGCTTCCAGTTA 59 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 154 TAAAAACGTTTTCAAAAAATCATGGGCACCGGAGAAAAAACCCTGAAGAGCTTCCAGTTA 213 Query 60 CATCGCAAACAATCAGTCAAAGTCAAAGATGTTCCAAAAGGGTGTTTAGCGATCAAAGTG 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 214 CATCGCAAACAATCAGTCAAAGTCAAAGATGTTCCAAAAGGGTGTTTAGCGATCAAAGTG 273 Query 120 GGATCACAAGGAGAAGAGCAACAGAGATTTATTGTTCCTGTTTTGTATTTTAACCATCCA 179 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 274 GGATCGCAAGGAGAAGAGCAACAGAGATTTATCGTTCCTGTTTTGTATTTTAACCATCCA 333 Query 180 TTGTTCATGCAGCTCCTGAAAGAAGCAGAAGACGAGTATGGATTCGATCAAAAGGGCACC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 334 TTGTTCATGCAGCTCCTGAAAGAAGCAGAAGACGAGTATGGATTCGATCAAAAGGGCACC 393 Query 240 ATCACAATTCCTTGTCACGTGGAGGAGTTTCGTTACGTTCAAGCTTTGATTGATGGAGAG 299 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 394 ATCACAATTCCTTGTCACGTGGAGGAGTTTCGTTACGTTCAAGCTTTGATAGATGGAGAG 453 Query 300 AGATCGGTTTATAATGGTAACAACAATCATCATAGACATGGTGGCCGTGACCAGTATCAT 359 ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 454 AGATCAGTTTACAATGGTAACAACCATCATCATAGACATGGTGGCCGTGACCAGTATCAT 513 Query 360 CATCTTGTTGGATGCTTCAGAGCTtgatgaatgatgatgaaa--a--tgatgaGTAGTGA 415 |||||||||||||||||||||||||||||||| ||||||||| | ||||| || |||| Sbjct 514 CATCTTGTTGGATGCTTCAGAGCTTGATGAATAATGATGAAATGAAATGATGGGTGGTGA 573 Query 416 TTGTATGTGTTCAAATTTTAATGTTTTTA-TGGTTTAATCTTGTGGAGTTGTGGAGCCAA 474 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 574 TTGTATGTGTTCAAATTTTAATGTTTTTTCTGGTTTAATCTTGTGGAGTTGTGGAGCCAA 633 Query 475 AACTGGCCTAACCCA 489 ||||||||||||||| Sbjct 634 AACTGGCCTAACCCA 648 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23308644208 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5