BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg935776 Length=350 Score E Sequences producing significant alignments: (Bits) Value AT2G47880.1 | Symbols: | Glutaredoxin family protein | chr2:19... 603 5e-172 AT2G30540.1 | Symbols: | Thioredoxin superfamily protein | chr... 189 1e-47 > AT2G47880.1 | Symbols: | Glutaredoxin family protein | chr2:19605040-19605671 FORWARD LENGTH=632 Length=632 Score = 603 bits (326), Expect = 5e-172 Identities = 343/351 (98%), Gaps = 1/351 (0%) Strand=Plus/Plus Query 1 TCTTCAGATTTCTGAGGATCATGGACAAGGTGATGAGAATGTCGTCAGAGAAAGGAGTGG 60 |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 65 TCTTCAGACTTCTGAGGATCATGGACAAAGTGATGAGAATGTCTTCAGAGAAAGGAGTGG 124 Query 61 TGATCTTCACGAAGAGCTCATGTTGTCTCTGCTACGCCGTTCAGATCCTGTTCCGTGACC 120 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 125 TGATCTTCACGAAGAGCTCATGTTGTCTCTGCTACGCCGTTCAAATCCTGTTCCGTGACC 184 Query 121 TTAGGGTTCAACCAACCATCCACGAGATCGACAACGACCCGGACTGCCGTGAGATCGAGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 185 TTAGGGTTCAACCAACCATCCACGAGATCGACAACGACCCGGACTGCCGTGAGATCGAGA 244 Query 181 AGGCTCTTCTCCGGCTCGGCTGTTCCACGGCGGTTCCAGCTGTCTTTGTCGGAGGCAAGC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 245 AGGCTCTTCTCCGGCTCGGCTGTTCCACGGCGGTTCCAGCTGTCTTTGTCGGAGGCAAGC 304 Query 241 TTGTTGGCTCCACCAATGAAGTCATGTCCCTTCACCTTAGTGGCTCTCTCGTCCCCTTGA 300 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 305 TTGTTGGCTCCACCAATGAAGTCATGTCCCTTCACCTTAGTGGCTCTCTTGTCCCATTGA 364 Query 301 TCAAACCCTATCAGTCCATCCTTTACTAGCAAA-TCAAACCAACTCAATAT 350 ||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 365 TCAAACCCTATCAGTCCATCCTTTACTAGCAAAATTAAACCAACTCAATAT 415 > AT2G30540.1 | Symbols: | Thioredoxin superfamily protein | chr2:13011105-13011784 REVERSE LENGTH=680 Length=680 Score = 189 bits (102), Expect = 1e-47 Identities = 218/273 (80%), Gaps = 12/273 (4%) Strand=Plus/Plus Query 20 CATGGAC-AAGGTGATGAGAATGTCGTCAGAGAAAGGAGTGGTGATCTTCA-CGAAGAGC 77 ||||||| ||| || |||||||||||||||||||||||||||| || |||| | |||||| Sbjct 217 CATGGACAAAGTTG-TGAGAATGTCGTCAGAGAAAGGAGTGGTTATTTTCAGC-AAGAGC 274 Query 78 TCATGTTGTC-TCTGCTACGCCGTTCA-GATCCTGTTCCGTGACCTTAGGGTTCAACCAA 135 || ||||| | | | ||| || || || | | || |||| |||||| ||||||| |||| Sbjct 275 TCGTGTTG-CATGTCCTATGCGGTCCAAG-TACTTTTCCAAGACCTTGGGGTTCACCCAA 332 Query 136 CCA-TCCACGAGATCGACAACGACCCGGACTGCCGTGAGATCGAGAAGGCTCTTCTCCGG 194 | | |||| |||||||| || ||||| || || |||||||||||||| || || | || Sbjct 333 C-AGTCCATGAGATCGATAAAGACCCTGAATGTCGTGAGATCGAGAAAGCCCTAATGAGG 391 Query 195 CTCGGCTGTTCCACGGCGGTTCCAGCTGTCTTTGTCGGAGGCAAGCTTGTTGGCTCCACC 254 | || ||||||||| |||| ||||| ||||||| || || ||||| |||| || ||| Sbjct 392 TTAGGGTGTTCCACGCCGGTCCCAGCCATCTTTGTGGGTGGGAAGCTCATTGGTTCGACC 451 Query 255 AATGAAGTCATGTCCCTTCACCTTA-GTGGCTC 286 |||||||||||||| |||||| ||| | ||||| Sbjct 452 AATGAAGTCATGTCGCTTCAC-TTAAGCGGCTC 483 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16387286174 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5