BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg935879 Length=1736 Score E Sequences producing significant alignments: (Bits) Value AT2G01600.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | c... 2638 0.0 > AT2G01600.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | chr2:268818-272610 FORWARD LENGTH=2127 Length=2127 Score = 2638 bits (1428), Expect = 0.0 Identities = 1643/1743 (94%), Gaps = 29/1743 (2%) Strand=Plus/Plus Query 22 TCCGATGGGAACGCTTCAGTCATGGAGAAAAGCTTACGGAGCCCTAAAAGACTCCACCAA 81 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 154 TCCGATGGGAACGCTACAGTCATGGAGAAAAGCCTATGGAGCCCTAAAAGACTCCACCAA 213 Query 82 AGTCGGCCTTGTCCGTGTCAACAGCGAATACGCCGATTTAGATGTCGCCATAGTCAAAGC 141 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 214 AGTCGGACTTGTCCGTGTCAACAGCGAATACGCCGATTTAGATGTTGCCATAGTCAAAGC 273 Query 142 TACCAATCATGTTGAGTGTCCTCCCAAAGATCGCCATCTCAGAAAAATCTTCGCTGCAAC 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 274 TACCAATCATGTTGAGTGTCCTCCCAAAGATCGCCATCTCAGAAAAATCTTCGCTGCAAC 333 Query 202 ATCAGTGACTCGTGCTCGAGCAGATGTTGCTTATTGTATTCACGCTCTTTCCCGGCGTTT 261 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 334 ATCAGTGACTCGTGCTCGAGCAGATGTTGCTTATTGTATTCACGCCCTTTCACGGCGTTT 393 Query 262 GCATAAAACCAGGAATTGGACGGTTGCTTTGAAAACACTAATTGTTATTCATCGGCTTCT 321 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 394 GCATAAAACCAGGAATTGGACGGTTGCTTTGAAAACACTAATTGTGATACATCGGCTTCT 453 Query 322 AAGGGAAGGAGATCCAACTTTCAGAGAGGAACTATTGAATTTTTCGCAGAGAGGGCGAAT 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 454 AAGGGAAGGAGATCCAACTTTCAGAGAGGAACTATTGAATTTTTCGCAGAGAGGGCGGAT 513 Query 382 TTTGCAGCTTTCTAATTTTAAGGATGATTCAAGCCCTATTGCCTGGGATTGTTCAGCTTG 441 |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 514 TTTGCAACTTTCTAATTTTAAGGATGATTCAAGTCCTATTGCTTGGGATTGTTCAGCTTG 573 Query 442 GGTACGTACTTATGCACTATTTCTCGAGGAACGGCTTGAATGCTTCAGGGTTTTAAAATA 501 |||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| Sbjct 574 GGTACGTACTTATGCATTGTTTCTTGAGGAACGGCTTGAATGCTTCAGGGTTTTAAAATA 633 Query 502 TGATACTGAGGCAGAACGTCTTCCCAAGTCTACCCCGGGGCAGGATAAGGGGTATAGTAG 561 |||||||||||| ||||||||||| || |||| ||| ||||||||||||||||||||||| Sbjct 634 TGATACTGAGGCCGAACGTCTTCCGAAATCTAACCCAGGGCAGGATAAGGGGTATAGTAG 693 Query 562 AACCAGGGATTTAGATGGTGAAGAACTCTTGGAGCAGTTGCCAGCTTTGCAGCAGCTTCT 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 694 AACCAGGGATTTAGATGGTGAAGAACTCTTGGAGCAGTTGCCAGCTTTGCAGCAGCTTCT 753 Query 622 CTATCGTCTCATCGGTTGCAGGCCAGAAGGTGCTGCTAACCACAATCATGTTATACAATA 681 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 754 CTATCGTCTCATCGGTTGCAGGCCGGAAGGTGCCGCTAACCACAATCATGTTATACAATA 813 Query 682 TGCACTTGCTCTGGTGTTGAAAGAGAGTTTTAAAGTCTATTGTGCTATTAATGATGGAAT 741 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 814 TGCACTTGCTCTGGTGTTGAAAGAGAGTTTTAAAGTCTATTGTGCTATTAATGATGGAAT 873 Query 742 CATCAATCTCATTGACAAGTTCTTTGAAATGGCAAAACATGAAGCCATCACTTCCCTTGA 801 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 874 CATCAATCTCATTGACAAGTTCTTTGAAATGGCAAAACATGAAGCCATCACTTCCCTTGA 933 Query 802 GATATACAAGCGTGCGGGTCAGCAGGCTCGTAGCCTTTCTGATTTCTATGAAGCCTGCAA 861 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 934 AATATACAAGCGTGCGGGTCAGCAGGCTCGTAGCCTTTCTGATTTCTATGAAGCCTGCAA 993 Query 862 AGGATTGGAACTTGCTAGGAATTTTCAATTTCCTGTTCTAAGAGAGCCTCCACAATCTTT 921 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 994 AGGATTGGAACTTGCAAGGAATTTTCAATTTCCTGTTCTAAGAGAGCCTCCACAATCTTT 1053 Query 922 TCTGACAACAATGGAGGAGTATATTAAAGAAGCACCGCGGGTTGTCGATGTCCCAGCAGA 981 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 1054 TCTGACAACAATGGAGGAGTATATTAAAGAAGCACCGCGTGTTGTCGATGTCCCAGCGGA 1113 Query 982 ACCACTGCTTCTAACATATAGGCCGGATGATGGACTGACTGCCGAAGATACTGAATCGTC 1041 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 1114 ACCACTGCTTCTAACATATAGGCCGGATGATGGACTGACTACCGAAGATACTGAACCGTC 1173 Query 1042 GCTTGAAGAACGTGAAATGTTACCTTCAGATGATGTCGTTGT---ACCTGAAGAAACAGA 1098 || ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 1174 GCATGAAGAACGTGAAATGTTACCTTCAGATGATGTCGTTGTTGTATCTGAAGAAACAGA 1233 Query 1099 ACCTTCTCCCCCGCTTCCTCCTTCAGCCAACGCTCAGAACTTCATTGACACCGATGATTT 1158 |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 1234 ACCTTCTCCCCCGCCTCCTCCTTCAGCCAACGCTCAGAACTTCATTGATACCGATGATCT 1293 Query 1159 ACTGGG-TCTGAACACTGGTGCTCCTGATGCATCAGTTATCGAAGACCAAAATGCACTTG 1217 | |||| |||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct 1294 A-TGGGGTCTGAATACTGGTGCTCCTGATACATCAGTGATCGAAGACCAAAATGCACTTG 1352 Query 1218 CTTTAGCCATTATTTCAACTGATGCTAATCCTTCAACGCCTCGTTTTGGTCAAGCAAATG 1277 ||||||||||| ||||||| |||||| ||||| |||| |||| |||||||||| ||||| Sbjct 1353 CTTTAGCCATTGTTTCAACAGATGCTGATCCTCCAACTCCTCATTTTGGTCAACCAAATA 1412 Query 1278 ATTACGATCCTACAGGATGGGAGCTTGCCTTGGTGACAGCACCTAGCAGCGATATCTCTG 1337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1413 ATTACGATCCTACAGGATGGGAGCTTGCCTTGGTGACAGCACCTAGCAGCGATATCTCTG 1472 Query 1338 CATCCACAGAGAGGAAATTGGCTGGAGGGTTAGATACGCTTACACTTAGCAGTCTATACG 1397 ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1473 CATCCACTGAGAGAAAACTGGCTGGAGGGTTAGATACGCTTACACTTAGCAGTCTATACG 1532 Query 1398 ATGATGGAGCCTACATAGCTTCCCAGCGCCCTGTGTACGGTGCACCAGCTCCCAATCCAT 1457 ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| Sbjct 1533 ATGATGGAGCCTACATAGCTTCCCAACGTCCTGTCTACGGTGCACCAGCTCCCAATCCAT 1592 Query 1458 TTGCGTCCCATGACCCTTTTGCGTCGTCCAATGGTACAACTCCCCCACCTCAGCAGCCAG 1517 |||||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||| || Sbjct 1593 TTGCGTCCCATGACCCGTTTGCATCGTCCAATGGCACAGCTCCCCCACCTCAGCAGCAAG 1652 Query 1518 CGGTCAACAACCCCTTCAGTGCTTACCAGCCGACATATCAGCATC--C----G------T 1565 |||| |||||||| ||| |||||||||||| |||||||||||||| | | | Sbjct 1653 CGGTGAACAACCCATTCGGTGCTTACCAGCAGACATATCAGCATCAGCCCCAGCCAACGT 1712 Query 1566 --C--CA--A--CC--C--TCCTACCAATAATAGTAACCCATTTGGTGATTTTGGGGAAT 1613 | || | || | ||| || ||||||||||| |||||||||||||||||||||| Sbjct 1713 ATCAGCATCAGTCCAACCCTCCCACTAATAATAGTAATCCATTTGGTGATTTTGGGGAAT 1772 Query 1614 TCCCGGTGAACCCGGTTTCACAGCAGCCAAATACCACAGGTTATGGTGATTTCGCGGTAA 1673 ||||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||||| Sbjct 1773 TCCCGGTTAACCCGGTTTCACAGCAGCCAAATACCTCCGGTTATGGTGATTTCTCGGTAA 1832 Query 1674 ACCAACATAACAACCCTTTCCGCAGCACTGGCCTCCTTTGATCATGTTGTCTATTCACGT 1733 |||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||| || Sbjct 1833 ACCAACATAACAACCCGTTCCGTAGCACTGGCCTCATTTGATCATGTTGTCTATTCATGT 1892 Query 1734 TTG 1736 ||| Sbjct 1893 TTG 1895 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85842931950 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5