BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg936135

Length=568
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G03420.1 | Symbols:  | unknown protein; Has 38 Blast hits to...   785    0.0  
  AT2G03410.1 | Symbols:  | Mo25 family protein | chr2:1033598-10...   268    3e-71


> AT2G03420.1 | Symbols:  | unknown protein; Has 38 Blast hits 
to 38 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa 
- 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes 
- 0 (source: NCBI BLink). | chr2:1034998-1035969 REVERSE 
LENGTH=647
Length=647

 Score =  785 bits (425),  Expect = 0.0
 Identities = 510/548 (93%), Gaps = 17/548 (3%)
 Strand=Plus/Plus

Query  4    AAAAATCTGAAGGCAAAATGATGCAAACCAAAATCTCTTCTTTCTCTCGACCAAGCTTCA  63
            |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct  16   AAAAATCTAAAGGCAAAATGATGCAAACAAAAATCTCTTCTTTCTCTCGACCAAGCTTTA  75

Query  64   CTCTCCATGAACCAAGAGTAGTtcatcatcctcgtatctccatggctatatgctcattat  123
             |||| |||||||||||||| |||||||||||||||||||||| |      ||||  |||
Sbjct  76   GTCTCTATGAACCAAGAGTAATTCATCATCCTCGTATCTCCAT-G------GCTC--TAT  126

Query  124  catcatcatcgtcatcaccatcaCCGTTTCACCATCTTCTCTGCAAGTCCACCTTCCCTC  183
            ||||||||  |    ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct  127  CATCATCA--G----CACCATCCCCGTTTCACCATCTTCTCTGCAAGTCCACCTTCCCTC  180

Query  184  TCGCTGCCTCACTCACCCTTCTCCTCTCTCCTTGTACCGCTGAAGCAGGACT-AATGTCA  242
            ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| 
Sbjct  181  TCGCTGCCTCACTCACCCTTCTCCTCTCTCCTTGTACCGCTGAAGCAGG-CTTAATGTCG  239

Query  243  GGATCTCCCGGTATAGAATCAGTTCCTGGTCCCGAATTACCAAAAATCGAATTCCTTGAC  302
            |||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct  240  GGATCTCCCGGTATAGAATCAGTTCCAGGTCCTGAATTACCAAAAATCGAGTTCCTTGAC  299

Query  303  CGTTTCAATGCAAAGAACCAGAAGTTCTACGCTGAAAACGATGCCAGATTCAAAGAATCT  362
            |||||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||
Sbjct  300  CGTTTCAATGCAAAAAACCAGAAGTTCTACGCAGAGAACGATGCCAGATTCAAAGATTCT  359

Query  363  CCACTTCTCAAGAAACTACTTGAGAATTCCAAACTCAACAAAGAAAAGAATGAAAGAGAT  422
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  360  CCACTTCTCAAGAAATTACTTGAGAATTCCAAACTCAACAAAGAAAAGAATGAAAGAGAG  419

Query  423  ATTCAAGACAAATATTGTCTAAGAGGAGCAGAATGGGGAGTAGGAGATTGTTCAACCACA  482
            |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct  420  ATTCAAGACAAATATTGTCTGAGAGGAGCAGAATGGGGAGTAGGAGATTGCTCAACCACA  479

Query  483  GGAATGACAGATGAAGAGAAGGAGAAATTTATCACAATGTTGAAAAAGAAGACTGGTGTT  542
            ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct  480  GGAATGACAGATGAAGAAAAGGAGAAATTCATCACAATGTTGAAAAAGAAGACTGGTGTT  539

Query  543  GAATAAAA  550
            ||||||||
Sbjct  540  GAATAAAA  547


> AT2G03410.1 | Symbols:  | Mo25 family protein | chr2:1033598-1036009 
FORWARD LENGTH=2412
Length=2412

 Score =  268 bits (145),  Expect = 3e-71
 Identities = 197/219 (90%), Gaps = 15/219 (7%)
 Strand=Plus/Minus

Query  4     AAAAATCTGAAGGCAAAATGATGCAAACCAAAATCTCTTCTTTCTCTCGACCAAGCTTCA  63
             |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct  2357  AAAAATCTAAAGGCAAAATGATGCAAACAAAAATCTCTTCTTTCTCTCGACCAAGCTTTA  2298

Query  64    CTCTCCATGAACCAAGAGTAGTtcatcatcctcgtatctccatggctatatgctcattat  123
              |||| |||||||||||||| ||||||||||||||||||||||||||     || ||   
Sbjct  2297  GTCTCTATGAACCAAGAGTAATTCATCATCCTCGTATCTCCATGGCT-----CT-AT---  2247

Query  124   catcatcatcgtcatcaccatcaCCGTTTCACCATCTTCTCTGCAAGTCCACCTTCCCTC  183
             ||||||||  | || | | ||| |||||||||||||||||||||||||||||||||||||
Sbjct  2246  CATCATCA--G-CA-C-C-ATCCCCGTTTCACCATCTTCTCTGCAAGTCCACCTTCCCTC  2193

Query  184   TCGCTGCCTCACTCACCCTTCTCCTCTCTCCTTGTACCG  222
             |||||||||||||||||||||||||||||||||||||||
Sbjct  2192  TCGCTGCCTCACTCACCCTTCTCCTCTCTCCTTGTACCG  2154


 Score =  233 bits (126),  Expect = 1e-60
 Identities = 136/141 (96%), Gaps = 0/141 (0%)
 Strand=Plus/Minus

Query  410   GAATGAAAGAGATATTCAAGACAAATATTGTCTAAGAGGAGCAGAATGGGGAGTAGGAGA  469
             |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  1641  GAATGAAAGAGAGATTCAAGACAAATATTGTCTGAGAGGAGCAGAATGGGGAGTAGGAGA  1582

Query  470   TTGTTCAACCACAGGAATGACAGATGAAGAGAAGGAGAAATTTATCACAATGTTGAAAAA  529
             ||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct  1581  TTGCTCAACCACAGGAATGACAGATGAAGAAAAGGAGAAATTCATCACAATGTTGAAAAA  1522

Query  530   GAAGACTGGTGTTGAATAAAA  550
             |||||||||||||||||||||
Sbjct  1521  GAAGACTGGTGTTGAATAAAA  1501


 Score =  156 bits (84),  Expect = 3e-37
 Identities = 94/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Minus

Query  312   GCAAAGAACCAGAAGTTCTACGCTGAAAACGATGCCAGATTCAAAGAATCTCCACTTCTC  371
             ||||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct  1889  GCAAAAAACCAGAAGTTCTACGCAGAGAACGATGCCAGATTCAAAGATTCTCCACTTCTC  1830

Query  372   AAGAAACTACTTGAGAATTCCAAACTCAACAAAGAAAAG  410
             |||||| ||||||||||||||||||||||||||||||||
Sbjct  1829  AAGAAATTACTTGAGAATTCCAAACTCAACAAAGAAAAG  1791



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 27277141821


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5